RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 MTERF4Q7Z6M4 381 aaKnown RBP18.96■□□□□ 0.63
PNKP-204ENST00000594661 CYP27B1O15528 508 aa18.95■□□□□ 0.62
PNKP-204ENST00000594661 LTBP4Q8N2S1 1624 aa18.95■□□□□ 0.62
PNKP-204ENST00000594661 NUCB1Q02818 461 aa18.95■□□□□ 0.62
PNKP-204ENST00000594661 TOM1L2Q6ZVM7 507 aa18.95■□□□□ 0.62
PNKP-204ENST00000594661 IFNL2Q8IZJ0 200 aa18.95■□□□□ 0.62
PNKP-204ENST00000594661 PHAXQ9H814 394 aaKnown RBP18.95■□□□□ 0.62
PNKP-204ENST00000594661 CCT4P50991 539 aaKnown RBP18.94■□□□□ 0.62
PNKP-204ENST00000594661 HEG1Q9ULI3 1381 aa18.94■□□□□ 0.62
PNKP-204ENST00000594661 UPF2Q9HAU5 1272 aaKnown RBP18.94■□□□□ 0.62
PNKP-204ENST00000594661 CHPF2Q9P2E5 772 aa18.94■□□□□ 0.62
PNKP-204ENST00000594661 LNPKQ9C0E8 428 aa18.93■□□□□ 0.62
PNKP-204ENST00000594661 BCL11BQ9C0K0 894 aaPredicted RBP18.93■□□□□ 0.62
PNKP-204ENST00000594661 SLC52A2Q9HAB3 445 aa18.93■□□□□ 0.62
PNKP-204ENST00000594661 PARP4Q9UKK3 1724 aaKnown RBP18.93■□□□□ 0.62
PNKP-204ENST00000594661 CHD1LQ86WJ1 897 aa18.92■□□□□ 0.62
PNKP-204ENST00000594661 GCC1Q96CN9 775 aa18.92■□□□□ 0.62
PNKP-204ENST00000594661 TBC1D2Q9BYX2 928 aa18.92■□□□□ 0.62
PNKP-204ENST00000594661 N4BP2Q86UW6 1770 aaPredicted RBP18.92■□□□□ 0.62
PNKP-204ENST00000594661 PRAMEF22A3QJZ6 481 aa18.92■□□□□ 0.62
PNKP-204ENST00000594661 GIGYF1O75420 1035 aaPredicted RBP18.92■□□□□ 0.62
PNKP-204ENST00000594661 MRC1P22897 1456 aa18.91■□□□□ 0.62
PNKP-204ENST00000594661 CEP85Q6P2H3 762 aa18.91■□□□□ 0.62
PNKP-204ENST00000594661 ANKRD44Q8N8A2 993 aa18.91■□□□□ 0.62
PNKP-204ENST00000594661 STRN4Q9NRL3 753 aa18.91■□□□□ 0.62
PNKP-204ENST00000594661 ANXA1P04083 346 aa18.91■□□□□ 0.62
PNKP-204ENST00000594661 NCLP19338 710 aaKnown RBP18.91■□□□□ 0.62
PNKP-204ENST00000594661 DMTNQ08495 405 aa18.91■□□□□ 0.62
PNKP-204ENST00000594661 SLC39A6Q13433 755 aa18.91■□□□□ 0.62
PNKP-204ENST00000594661 LARP1Q6PKG0 1096 aaKnown RBP18.91■□□□□ 0.62
PNKP-204ENST00000594661 ZSCAN30Q86W11 494 aa18.91■□□□□ 0.62
PNKP-204ENST00000594661 NFATC2IPQ8NCF5 419 aa18.91■□□□□ 0.62
PNKP-204ENST00000594661 PXDNLA1KZ92 1463 aa18.9■□□□□ 0.62
PNKP-204ENST00000594661 AHDC1Q5TGY3 1603 aaPredicted RBP18.9■□□□□ 0.62
PNKP-204ENST00000594661 DDX11L8A8MPP1 907 aa18.9■□□□□ 0.62
PNKP-204ENST00000594661 DCAF5Q96JK2 942 aa18.9■□□□□ 0.62
PNKP-204ENST00000594661 ANKRD45Q5TZF3 282 aa18.89■□□□□ 0.62
PNKP-204ENST00000594661 ZNF790Q6PG37 636 aa18.89■□□□□ 0.62
PNKP-204ENST00000594661 PPP1R9BQ96SB3 815 aa18.89■□□□□ 0.62
PNKP-204ENST00000594661 CHMP5Q9NZZ3 219 aa18.89■□□□□ 0.62
PNKP-204ENST00000594661 GTF2E1P29083 439 aaPredicted RBP18.89■□□□□ 0.61
PNKP-204ENST00000594661 BBXQ8WY36 941 aaPredicted RBP18.89■□□□□ 0.61
PNKP-204ENST00000594661 CARD10Q9BWT7 1032 aa18.89■□□□□ 0.61
PNKP-204ENST00000594661 RPAP2Q8IXW5 612 aaPredicted RBP18.88■□□□□ 0.61
PNKP-204ENST00000594661 TBC1D32Q96NH3 1257 aa18.88■□□□□ 0.61
PNKP-204ENST00000594661 C5P01031 1676 aa18.88■□□□□ 0.61
PNKP-204ENST00000594661 CCDC173Q0VFZ6 552 aa18.88■□□□□ 0.61
PNKP-204ENST00000594661 CHMP4AQ9BY43 222 aa18.88■□□□□ 0.61
PNKP-204ENST00000594661 EVA1CP58658 441 aa18.87■□□□□ 0.61
PNKP-204ENST00000594661 PROSER3Q2NL68 480 aa18.87■□□□□ 0.61
PNKP-204ENST00000594661 FAM13BQ9NYF5 915 aa18.87■□□□□ 0.61
PNKP-204ENST00000594661 HSP90AB1P08238 724 aaKnown RBP18.86■□□□□ 0.61
PNKP-204ENST00000594661 ZCRB1Q8TBF4 217 aaKnown RBP18.86■□□□□ 0.61
PNKP-204ENST00000594661 DCTPP1Q9H773 170 aa18.86■□□□□ 0.61
PNKP-204ENST00000594661 DBF4Q9UBU7 674 aaPredicted RBP18.86■□□□□ 0.61
PNKP-204ENST00000594661 IL2RBP14784 551 aa18.86■□□□□ 0.61
PNKP-204ENST00000594661 ZHX1Q9UKY1 873 aaPredicted RBP18.86■□□□□ 0.61
PNKP-204ENST00000594661 SHANK3Q9BYB0 1731 aa18.86■□□□□ 0.61
PNKP-204ENST00000594661 PCDH11XQ9BZA7 1347 aa18.86■□□□□ 0.61
PNKP-204ENST00000594661 PCDH11YQ9BZA8 1340 aa18.86■□□□□ 0.61
PNKP-204ENST00000594661 COL22A1Q8NFW1 1626 aaPredicted RBP18.85■□□□□ 0.61
PNKP-204ENST00000594661 BTG4Q9NY30 223 aa18.85■□□□□ 0.61
PNKP-204ENST00000594661 ADCY9O60503 1353 aa18.84■□□□□ 0.61
PNKP-204ENST00000594661 PI4KAP2A4QPH2 592 aa18.84■□□□□ 0.61
PNKP-204ENST00000594661 GNAI2P04899 355 aa18.84■□□□□ 0.61
PNKP-204ENST00000594661 PI4KAP1Q8N8J0 262 aa18.84■□□□□ 0.61
PNKP-204ENST00000594661 ZNF496Q96IT1 587 aaPredicted RBP18.83■□□□□ 0.61
PNKP-204ENST00000594661 COL16A1Q07092 1604 aaPredicted RBP18.83■□□□□ 0.61
PNKP-204ENST00000594661 GNAI3P08754 354 aa18.83■□□□□ 0.6
PNKP-204ENST00000594661 MFAP1P55081 439 aaKnown RBP18.83■□□□□ 0.6
PNKP-204ENST00000594661 CABP4P57796 275 aa18.83■□□□□ 0.6
PNKP-204ENST00000594661 GAS2L3Q86XJ1 694 aa18.83■□□□□ 0.6
PNKP-204ENST00000594661 USP44Q9H0E7 712 aa18.83■□□□□ 0.6
PNKP-204ENST00000594661 COL14A1Q05707 1796 aaKnown RBP18.83■□□□□ 0.6
PNKP-204ENST00000594661 DYNC1I1O14576 645 aa18.82■□□□□ 0.6
PNKP-204ENST00000594661 DNAAF4Q8WXU2 420 aa18.82■□□□□ 0.6
PNKP-204ENST00000594661 SRCIN1Q9C0H9 1055 aa18.82■□□□□ 0.6
PNKP-204ENST00000594661 GLI3P10071 1580 aa18.81■□□□□ 0.6
PNKP-204ENST00000594661 PDIA6Q15084 440 aa18.81■□□□□ 0.6
PNKP-204ENST00000594661 BEND3Q5T5X7 828 aa18.81■□□□□ 0.6
PNKP-204ENST00000594661 TTC5Q8N0Z6 440 aa18.81■□□□□ 0.6
PNKP-204ENST00000594661 NAP1L2Q9ULW6 460 aaPredicted RBP18.81■□□□□ 0.6
PNKP-204ENST00000594661 BMP2KLQ5H9B9 411 aa18.8■□□□□ 0.6
PNKP-204ENST00000594661 ZSCAN20P17040 1043 aaPredicted RBP18.8■□□□□ 0.6
PNKP-204ENST00000594661 MSNP26038 577 aaKnown RBP18.8■□□□□ 0.6
PNKP-204ENST00000594661 DDX54Q8TDD1 881 aaKnown RBP18.8■□□□□ 0.6
PNKP-204ENST00000594661 C22orf23Q9BZE7 217 aa18.8■□□□□ 0.6
PNKP-204ENST00000594661 DDX21Q9NR30 783 aaKnown RBP eCLIP18.8■□□□□ 0.6
PNKP-204ENST00000594661 LRRFIP2Q9Y608 721 aaKnown RBP18.8■□□□□ 0.6
PNKP-204ENST00000594661 HMMRO75330 724 aa18.79■□□□□ 0.6
PNKP-204ENST00000594661 NKX1-1Q15270 411 aaPredicted RBP18.79■□□□□ 0.6
PNKP-204ENST00000594661 HS1BP3Q53T59 392 aa18.79■□□□□ 0.6
PNKP-204ENST00000594661 HYPKQ9NX55 129 aa18.79■□□□□ 0.6
PNKP-204ENST00000594661 PHLPP1O60346 1717 aa18.79■□□□□ 0.6
PNKP-204ENST00000594661 ZNF500O60304 480 aaPredicted RBP18.78■□□□□ 0.6
PNKP-204ENST00000594661 UBTFL1P0CB47 393 aaPredicted RBP18.78■□□□□ 0.6
PNKP-204ENST00000594661 FMNL2Q96PY5 1086 aa18.78■□□□□ 0.6
PNKP-204ENST00000594661 CCDC94Q9BW85 323 aaPredicted RBP18.78■□□□□ 0.6
PNKP-204ENST00000594661 MAP3K2Q9Y2U5 619 aa18.78■□□□□ 0.6
PNKP-204ENST00000594661 R3HCC1Q9Y3T6 440 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms