RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 SRP68Q9UHB9 627 aaKnown RBP16.97■□□□□ 0.31
ZNF558-202ENST00000593891 MAP2P11137 1827 aaKnown RBP16.97■□□□□ 0.31
ZNF558-202ENST00000593891 TM4SF1P30408 202 aa16.96■□□□□ 0.31
ZNF558-202ENST00000593891 FXR1P51114 621 aaKnown RBP eCLIP16.96■□□□□ 0.31
ZNF558-202ENST00000593891 TAOK3Q9H2K8 898 aa16.96■□□□□ 0.31
ZNF558-202ENST00000593891 SBNO2Q9Y2G9 1366 aa16.96■□□□□ 0.31
ZNF558-202ENST00000593891 HDGFL2Q7Z4V5 671 aaPredicted RBP16.95■□□□□ 0.3
ZNF558-202ENST00000593891 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
ZNF558-202ENST00000593891 LTBP1Q14766 1721 aa16.95■□□□□ 0.3
ZNF558-202ENST00000593891 USP42Q9H9J4 1324 aaKnown RBP16.95■□□□□ 0.3
ZNF558-202ENST00000593891 LTBP3Q9NS15 1303 aa16.95■□□□□ 0.3
ZNF558-202ENST00000593891 C21orf2O43822 256 aa16.94■□□□□ 0.3
ZNF558-202ENST00000593891 SLC17A8Q8NDX2 589 aa16.94■□□□□ 0.3
ZNF558-202ENST00000593891 TLL2Q9Y6L7 1015 aa16.94■□□□□ 0.3
ZNF558-202ENST00000593891 CASP8AP2Q9UKL3 1982 aa16.93■□□□□ 0.3
ZNF558-202ENST00000593891 SPG7Q9UQ90 795 aa16.91■□□□□ 0.3
ZNF558-202ENST00000593891 ZPR1O75312 459 aa16.9■□□□□ 0.3
ZNF558-202ENST00000593891 CIAPIN1Q6FI81 312 aa16.9■□□□□ 0.3
ZNF558-202ENST00000593891 ZNF622Q969S3 477 aaKnown RBP eCLIP16.9■□□□□ 0.3
ZNF558-202ENST00000593891 SLC4A9Q96Q91 983 aa16.9■□□□□ 0.3
ZNF558-202ENST00000593891 ITGB4P16144 1822 aa16.9■□□□□ 0.3
ZNF558-202ENST00000593891 CCDC88AQ3V6T2 1871 aa16.9■□□□□ 0.3
ZNF558-202ENST00000593891 KDRP35968 1356 aa16.89■□□□□ 0.3
ZNF558-202ENST00000593891 SCN4AP35499 1836 aa16.89■□□□□ 0.29
ZNF558-202ENST00000593891 COG3Q96JB2 828 aa16.89■□□□□ 0.29
ZNF558-202ENST00000593891 CST9Q5W186 159 aa16.88■□□□□ 0.29
ZNF558-202ENST00000593891 TMC1Q8TDI8 760 aa16.88■□□□□ 0.29
ZNF558-202ENST00000593891 EDC4Q6P2E9 1401 aaKnown RBP16.87■□□□□ 0.29
ZNF558-202ENST00000593891 FBLN1P23142 703 aa16.87■□□□□ 0.29
ZNF558-202ENST00000593891 PDZRN3Q9UPQ7 1066 aa16.87■□□□□ 0.29
ZNF558-202ENST00000593891 RTL1A6NKG5 1358 aa16.87■□□□□ 0.29
ZNF558-202ENST00000593891 MON2Q7Z3U7 1717 aa16.87■□□□□ 0.29
ZNF558-202ENST00000593891 SERPINB2P05120 415 aa16.86■□□□□ 0.29
ZNF558-202ENST00000593891 FMR1Q06787 632 aaKnown RBP eCLIP16.86■□□□□ 0.29
ZNF558-202ENST00000593891 SOGA3Q5TF21 947 aa16.86■□□□□ 0.29
ZNF558-202ENST00000593891 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
ZNF558-202ENST00000593891 NFIXQ14938 502 aa16.85■□□□□ 0.29
ZNF558-202ENST00000593891 USPL1Q5W0Q7 1092 aa16.85■□□□□ 0.29
ZNF558-202ENST00000593891 CTU1Q7Z7A3 348 aaKnown RBP16.85■□□□□ 0.29
ZNF558-202ENST00000593891 SAPCD2Q86UD0 394 aa16.85■□□□□ 0.29
ZNF558-202ENST00000593891 HHIPL1Q96JK4 782 aa16.85■□□□□ 0.29
ZNF558-202ENST00000593891 TERF2IPQ9NYB0 399 aa16.85■□□□□ 0.29
ZNF558-202ENST00000593891 RNF123Q5XPI4 1314 aa16.85■□□□□ 0.29
ZNF558-202ENST00000593891 RGPD2P0DJD1 1756 aa16.84■□□□□ 0.29
ZNF558-202ENST00000593891 HPS5Q9UPZ3 1129 aa16.84■□□□□ 0.29
ZNF558-202ENST00000593891 NOGQ13253 232 aa16.83■□□□□ 0.28
ZNF558-202ENST00000593891 BICDL1Q6ZP65 573 aa16.83■□□□□ 0.28
ZNF558-202ENST00000593891 IFNL2Q8IZJ0 200 aa16.83■□□□□ 0.28
ZNF558-202ENST00000593891 ADAMTSL1Q8N6G6 1762 aa16.83■□□□□ 0.28
ZNF558-202ENST00000593891 ZNF541Q9H0D2 1346 aa16.83■□□□□ 0.28
ZNF558-202ENST00000593891 DICER1Q9UPY3 1922 aaKnown RBP16.83■□□□□ 0.28
ZNF558-202ENST00000593891 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
ZNF558-202ENST00000593891 CUL9Q8IWT3 2517 aa16.82■□□□□ 0.28
ZNF558-202ENST00000593891 TRAF5O00463 557 aa16.81■□□□□ 0.28
ZNF558-202ENST00000593891 PDE6BP35913 854 aa16.81■□□□□ 0.28
ZNF558-202ENST00000593891 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
ZNF558-202ENST00000593891 SAGE1Q9NXZ1 904 aa16.81■□□□□ 0.28
ZNF558-202ENST00000593891 LMOD1P29536 600 aaPredicted RBP16.8■□□□□ 0.28
ZNF558-202ENST00000593891 SLC12A5Q9H2X9 1139 aa16.8■□□□□ 0.28
ZNF558-202ENST00000593891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.28
ZNF558-202ENST00000593891 PHKG2P15735 406 aa16.79■□□□□ 0.28
ZNF558-202ENST00000593891 PKN2Q16513 984 aaKnown RBP16.79■□□□□ 0.28
ZNF558-202ENST00000593891 GPC2Q8N158 579 aa16.79■□□□□ 0.28
ZNF558-202ENST00000593891 CNKSR1Q969H4 720 aa16.79■□□□□ 0.28
ZNF558-202ENST00000593891 INSRP06213 1382 aa16.78■□□□□ 0.28
ZNF558-202ENST00000593891 PITPNM2Q9BZ72 1349 aa16.78■□□□□ 0.28
ZNF558-202ENST00000593891 CELF2O95319 508 aaKnown RBP16.78■□□□□ 0.28
ZNF558-202ENST00000593891 HSP90AB2PQ58FF8 381 aa16.78■□□□□ 0.28
ZNF558-202ENST00000593891 BRIP1Q9BX63 1249 aa16.78■□□□□ 0.28
ZNF558-202ENST00000593891 DLEC1Q9Y238 1755 aa16.78■□□□□ 0.28
ZNF558-202ENST00000593891 ERVV-2B6SEH9 535 aa16.77■□□□□ 0.28
ZNF558-202ENST00000593891 ZNF831Q5JPB2 1677 aa16.76■□□□□ 0.27
ZNF558-202ENST00000593891 PTCD1O75127 700 aaKnown RBP16.76■□□□□ 0.27
ZNF558-202ENST00000593891 NARFQ9UHQ1 456 aa16.76■□□□□ 0.27
ZNF558-202ENST00000593891 CARMIL3Q8ND23 1372 aa16.76■□□□□ 0.27
ZNF558-202ENST00000593891 FER1L6Q2WGJ9 1857 aa16.76■□□□□ 0.27
ZNF558-202ENST00000593891 ZIC5Q96T25 663 aa16.75■□□□□ 0.27
ZNF558-202ENST00000593891 FZD9O00144 591 aa16.74■□□□□ 0.27
ZNF558-202ENST00000593891 TRPA1O75762 1119 aa16.74■□□□□ 0.27
ZNF558-202ENST00000593891 CCDC93Q567U6 631 aa16.74■□□□□ 0.27
ZNF558-202ENST00000593891 PRPF40BQ6NWY9 871 aaKnown RBP16.74■□□□□ 0.27
ZNF558-202ENST00000593891 INTS5Q6P9B9 1019 aaKnown RBP16.74■□□□□ 0.27
ZNF558-202ENST00000593891 USP50Q70EL3 339 aaPredicted RBP16.74■□□□□ 0.27
ZNF558-202ENST00000593891 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
ZNF558-202ENST00000593891 STYK1Q6J9G0 422 aa16.73■□□□□ 0.27
ZNF558-202ENST00000593891 ZNF277Q9NRM2 450 aaPredicted RBP16.73■□□□□ 0.27
ZNF558-202ENST00000593891 COLQQ9Y215 455 aaPredicted RBP16.73■□□□□ 0.27
ZNF558-202ENST00000593891 COL5A3P25940 1745 aaPredicted RBP16.73■□□□□ 0.27
ZNF558-202ENST00000593891 ADAMTS7Q9UKP4 1686 aa16.72■□□□□ 0.27
ZNF558-202ENST00000593891 FKBP4Q02790 459 aaKnown RBP eCLIP16.72■□□□□ 0.27
ZNF558-202ENST00000593891 RNF186Q9NXI6 227 aa16.72■□□□□ 0.27
ZNF558-202ENST00000593891 GJA3Q9Y6H8 435 aa16.72■□□□□ 0.27
ZNF558-202ENST00000593891 MNX1P50219 401 aaPredicted RBP16.71■□□□□ 0.27
ZNF558-202ENST00000593891 MYH14Q7Z406 1995 aaKnown RBP16.71■□□□□ 0.27
ZNF558-202ENST00000593891 EPS15P42566 896 aa16.7■□□□□ 0.26
ZNF558-202ENST00000593891 CABP4P57796 275 aa16.7■□□□□ 0.26
ZNF558-202ENST00000593891 JDP2Q8WYK2 163 aa16.7■□□□□ 0.26
ZNF558-202ENST00000593891 ZNF408Q9H9D4 720 aa16.7■□□□□ 0.26
ZNF558-202ENST00000593891 HDAC9Q9UKV0 1011 aa16.7■□□□□ 0.26
ZNF558-202ENST00000593891 NRXN2Q9P2S2 1712 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms