RNA–Protein interactions for RNA: ENST00000593708.1

USF2-204, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-204ENST00000593708 NRXN2Q9P2S2 1712 aa29.18■■■□□ 2.26
USF2-204ENST00000593708 CNGB1Q14028 1251 aaPredicted RBP29.18■■■□□ 2.26
USF2-204ENST00000593708 HSPA6P17066 643 aa29.17■■■□□ 2.26
USF2-204ENST00000593708 CHRNA5P30532 468 aa29.17■■■□□ 2.26
USF2-204ENST00000593708 ZPR1O75312 459 aa29.16■■■□□ 2.26
USF2-204ENST00000593708 PIM2Q9P1W9 311 aa29.16■■■□□ 2.26
USF2-204ENST00000593708 SBF1O95248 1867 aa29.14■■■□□ 2.26
USF2-204ENST00000593708 BCL2L12Q9HB09 334 aa29.14■■■□□ 2.26
USF2-204ENST00000593708 DLEC1Q9Y238 1755 aa29.13■■■□□ 2.25
USF2-204ENST00000593708 NFIXQ14938 502 aa29.13■■■□□ 2.25
USF2-204ENST00000593708 DALRD3Q5D0E6 543 aaKnown RBP29.13■■■□□ 2.25
USF2-204ENST00000593708 NARFQ9UHQ1 456 aa29.13■■■□□ 2.25
USF2-204ENST00000593708 VSIG10Q8N0Z9 540 aa29.12■■■□□ 2.25
USF2-204ENST00000593708 U2SURPO15042 1029 aaKnown RBP29.11■■■□□ 2.25
USF2-204ENST00000593708 C9orf131Q5VYM1 1079 aa29.11■■■□□ 2.25
USF2-204ENST00000593708 NMRK2Q9NPI5 230 aa29.11■■■□□ 2.25
USF2-204ENST00000593708 IL17REQ8NFR9 667 aa29.1■■■□□ 2.25
USF2-204ENST00000593708 SCN7AQ01118 1682 aa29.09■■■□□ 2.25
USF2-204ENST00000593708 ZNF496Q96IT1 587 aaPredicted RBP29.08■■■□□ 2.25
USF2-204ENST00000593708 CANXP27824 592 aaKnown RBP29.07■■■□□ 2.24
USF2-204ENST00000593708 CARMIL3Q8ND23 1372 aa29.06■■■□□ 2.24
USF2-204ENST00000593708 GNAT3A8MTJ3 354 aa29.06■■■□□ 2.24
USF2-204ENST00000593708 EIF5P55010 431 aaKnown RBP29.05■■■□□ 2.24
USF2-204ENST00000593708 TTC5Q8N0Z6 440 aa29.05■■■□□ 2.24
USF2-204ENST00000593708 GAS2L2Q8NHY3 880 aa29.05■■■□□ 2.24
USF2-204ENST00000593708 ANKRD31Q8N7Z5 1873 aa29.05■■■□□ 2.24
USF2-204ENST00000593708 HEG1Q9ULI3 1381 aa29.04■■■□□ 2.24
USF2-204ENST00000593708 ZNF790Q6PG37 636 aa29.04■■■□□ 2.24
USF2-204ENST00000593708 PHACTR3Q96KR7 559 aa29.04■■■□□ 2.24
USF2-204ENST00000593708 CEMIPQ8WUJ3 1361 aa29.03■■■□□ 2.24
USF2-204ENST00000593708 TOMM70O94826 608 aa29.03■■■□□ 2.24
USF2-204ENST00000593708 SERPINB2P05120 415 aa29.03■■■□□ 2.24
USF2-204ENST00000593708 TEFQ10587 303 aa29.03■■■□□ 2.24
USF2-204ENST00000593708 STARD3NLO95772 234 aa29.02■■■□□ 2.24
USF2-204ENST00000593708 RNF181Q9P0P0 153 aa29.02■■■□□ 2.24
USF2-204ENST00000593708 RSPH6AQ9H0K4 717 aa29.01■■■□□ 2.23
USF2-204ENST00000593708 COL11A2P13942 1736 aaPredicted RBP29■■■□□ 2.23
USF2-204ENST00000593708 TNRC6CQ9HCJ0 1690 aaKnown RBP28.99■■■□□ 2.23
USF2-204ENST00000593708 PRKAR2BP31323 418 aa28.99■■■□□ 2.23
USF2-204ENST00000593708 RASSF7Q02833 373 aa28.99■■■□□ 2.23
USF2-204ENST00000593708 BICDL1Q6ZP65 573 aa28.99■■■□□ 2.23
USF2-204ENST00000593708 CCDC88AQ3V6T2 1871 aa28.99■■■□□ 2.23
USF2-204ENST00000593708 KCNQ3O43525 872 aa28.98■■■□□ 2.23
USF2-204ENST00000593708 PRELPP51888 382 aa28.97■■■□□ 2.23
USF2-204ENST00000593708 TBC1D9BQ66K14 1250 aa28.97■■■□□ 2.23
USF2-204ENST00000593708 BCORQ6W2J9 1755 aa28.97■■■□□ 2.23
USF2-204ENST00000593708 PCNTO95613 3336 aa28.96■■■□□ 2.23
USF2-204ENST00000593708 TIAM2Q8IVF5 1701 aa28.96■■■□□ 2.23
USF2-204ENST00000593708 WDR90Q96KV7 1748 aa28.95■■■□□ 2.23
USF2-204ENST00000593708 C2CD5Q86YS7 1000 aa28.95■■■□□ 2.22
USF2-204ENST00000593708 TBC1D2BQ9UPU7 963 aa28.95■■■□□ 2.22
USF2-204ENST00000593708 ZNF330Q9Y3S2 320 aaPredicted RBP28.95■■■□□ 2.22
USF2-204ENST00000593708 A0A087WZG4 1122 aa28.94■■■□□ 2.22
USF2-204ENST00000593708 APLP1P51693 650 aa28.94■■■□□ 2.22
USF2-204ENST00000593708 FMNL2Q96PY5 1086 aa28.94■■■□□ 2.22
USF2-204ENST00000593708 A1BGP04217 495 aa28.93■■■□□ 2.22
USF2-204ENST00000593708 CFAP53Q96M91 514 aa28.93■■■□□ 2.22
USF2-204ENST00000593708 TEX13AQ9BXU3 409 aaPredicted RBP28.93■■■□□ 2.22
USF2-204ENST00000593708 PPP2R1AP30153 589 aa28.92■■■□□ 2.22
USF2-204ENST00000593708 IL6STP40189 918 aaPredicted RBP28.92■■■□□ 2.22
USF2-204ENST00000593708 TTLL6Q8N841 843 aa28.92■■■□□ 2.22
USF2-204ENST00000593708 RBM46Q8TBY0 533 aaKnown RBP28.92■■■□□ 2.22
USF2-204ENST00000593708 KDM2BQ8NHM5 1336 aa28.92■■■□□ 2.22
USF2-204ENST00000593708 CCDC24Q8N4L8 307 aa28.91■■■□□ 2.22
USF2-204ENST00000593708 BTBD11A6QL63 1104 aa28.9■■■□□ 2.22
USF2-204ENST00000593708 H0YIN7 160 aa28.9■■■□□ 2.22
USF2-204ENST00000593708 DNAJC5GQ8N7S2 189 aa28.9■■■□□ 2.22
USF2-204ENST00000593708 CAMTA2O94983 1202 aa28.89■■■□□ 2.22
USF2-204ENST00000593708 PRR5LQ6MZQ0 368 aa28.89■■■□□ 2.22
USF2-204ENST00000593708 RRAGCQ9HB90 399 aa28.89■■■□□ 2.22
USF2-204ENST00000593708 CACNA1SQ13698 1873 aa28.89■■■□□ 2.21
USF2-204ENST00000593708 PRAMEF22A3QJZ6 481 aa28.88■■■□□ 2.21
USF2-204ENST00000593708 NFKBIEO00221 500 aa28.88■■■□□ 2.21
USF2-204ENST00000593708 LMNB1P20700 586 aa28.88■■■□□ 2.21
USF2-204ENST00000593708 PIP4K2AP48426 406 aaPredicted RBP28.88■■■□□ 2.21
USF2-204ENST00000593708 MCM10Q7L590 875 aa28.88■■■□□ 2.21
USF2-204ENST00000593708 FER1L6Q2WGJ9 1857 aa28.88■■■□□ 2.21
USF2-204ENST00000593708 U2AF1L5P0DN76 240 aaPredicted RBP28.87■■■□□ 2.21
USF2-204ENST00000593708 U2AF1Q01081 240 aaKnown RBP eCLIP28.87■■■□□ 2.21
USF2-204ENST00000593708 ZC3H4Q9UPT8 1303 aaKnown RBP28.87■■■□□ 2.21
USF2-204ENST00000593708 IFFO2Q5TF58 517 aa28.86■■■□□ 2.21
USF2-204ENST00000593708 C16orf71Q8IYS4 520 aaPredicted RBP28.86■■■□□ 2.21
USF2-204ENST00000593708 BRIP1Q9BX63 1249 aa28.86■■■□□ 2.21
USF2-204ENST00000593708 USP16Q9Y5T5 823 aa28.86■■■□□ 2.21
USF2-204ENST00000593708 NUDCQ9Y266 331 aa28.85■■■□□ 2.21
USF2-204ENST00000593708 SLX4Q8IY92 1834 aa28.85■■■□□ 2.21
USF2-204ENST00000593708 DICER1Q9UPY3 1922 aaKnown RBP28.84■■■□□ 2.21
USF2-204ENST00000593708 HTRA3P83110 453 aa28.84■■■□□ 2.21
USF2-204ENST00000593708 DCTN1Q14203 1278 aa28.84■■■□□ 2.21
USF2-204ENST00000593708 ARFGEF2Q9Y6D5 1785 aa28.83■■■□□ 2.21
USF2-204ENST00000593708 DLG5Q8TDM6 1919 aa28.83■■■□□ 2.21
USF2-204ENST00000593708 FSTL1Q12841 308 aa28.82■■■□□ 2.2
USF2-204ENST00000593708 ZNF622Q969S3 477 aaKnown RBP eCLIP28.82■■■□□ 2.2
USF2-204ENST00000593708 PDE6BP35913 854 aa28.81■■■□□ 2.2
USF2-204ENST00000593708 DZIP3Q86Y13 1208 aaKnown RBP28.81■■■□□ 2.2
USF2-204ENST00000593708 CNBD1Q8NA66 436 aa28.81■■■□□ 2.2
USF2-204ENST00000593708 SETDB2Q96T68 719 aa28.81■■■□□ 2.2
USF2-204ENST00000593708 ZNF219Q9P2Y4 722 aaPredicted RBP28.8■■■□□ 2.2
USF2-204ENST00000593708 GLTPD2A6NH11 291 aa28.79■■■□□ 2.2
USF2-204ENST00000593708 C21orf2O43822 256 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms