RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 DALRD3Q5D0E6 543 aaKnown RBP30.54■■■□□ 2.48
SSBP4-203ENST00000593641 COL3A1P02461 1466 aaPredicted RBP30.54■■■□□ 2.48
SSBP4-203ENST00000593641 AFDNP55196 1824 aaKnown RBP30.53■■■□□ 2.48
SSBP4-203ENST00000593641 U2SURPO15042 1029 aaKnown RBP30.53■■■□□ 2.48
SSBP4-203ENST00000593641 TM4SF1P30408 202 aa30.53■■■□□ 2.48
SSBP4-203ENST00000593641 TTC5Q8N0Z6 440 aa30.53■■■□□ 2.48
SSBP4-203ENST00000593641 ZBTB1Q9Y2K1 713 aa30.53■■■□□ 2.48
SSBP4-203ENST00000593641 NARFQ9UHQ1 456 aa30.52■■■□□ 2.48
SSBP4-203ENST00000593641 GAS2L2Q8NHY3 880 aa30.5■■■□□ 2.47
SSBP4-203ENST00000593641 CHRNA5P30532 468 aa30.49■■■□□ 2.47
SSBP4-203ENST00000593641 TEFQ10587 303 aa30.48■■■□□ 2.47
SSBP4-203ENST00000593641 C9orf131Q5VYM1 1079 aa30.48■■■□□ 2.47
SSBP4-203ENST00000593641 STARD3NLO95772 234 aa30.47■■■□□ 2.47
SSBP4-203ENST00000593641 NFIXQ14938 502 aa30.47■■■□□ 2.47
SSBP4-203ENST00000593641 NRXN2Q9P2S2 1712 aa30.47■■■□□ 2.47
SSBP4-203ENST00000593641 GNAT3A8MTJ3 354 aa30.46■■■□□ 2.47
SSBP4-203ENST00000593641 CANXP27824 592 aaKnown RBP30.46■■■□□ 2.47
SSBP4-203ENST00000593641 SIPA1L3O60292 1781 aaPredicted RBP30.46■■■□□ 2.47
SSBP4-203ENST00000593641 SBF1O95248 1867 aa30.44■■■□□ 2.46
SSBP4-203ENST00000593641 TOMM70O94826 608 aa30.43■■■□□ 2.46
SSBP4-203ENST00000593641 DLEC1Q9Y238 1755 aa30.43■■■□□ 2.46
SSBP4-203ENST00000593641 IL17REQ8NFR9 667 aa30.42■■■□□ 2.46
SSBP4-203ENST00000593641 CFAP53Q96M91 514 aa30.42■■■□□ 2.46
SSBP4-203ENST00000593641 NMRK2Q9NPI5 230 aa30.42■■■□□ 2.46
SSBP4-203ENST00000593641 A0A087WZG4 1122 aa30.41■■■□□ 2.46
SSBP4-203ENST00000593641 SERPINB2P05120 415 aa30.41■■■□□ 2.46
SSBP4-203ENST00000593641 ZNF790Q6PG37 636 aa30.41■■■□□ 2.46
SSBP4-203ENST00000593641 ZNF496Q96IT1 587 aaPredicted RBP30.41■■■□□ 2.46
SSBP4-203ENST00000593641 BCL2L12Q9HB09 334 aa30.41■■■□□ 2.46
SSBP4-203ENST00000593641 RNF181Q9P0P0 153 aa30.41■■■□□ 2.46
SSBP4-203ENST00000593641 HEG1Q9ULI3 1381 aa30.41■■■□□ 2.46
SSBP4-203ENST00000593641 TEX13AQ9BXU3 409 aaPredicted RBP30.4■■■□□ 2.46
SSBP4-203ENST00000593641 EIF5P55010 431 aaKnown RBP30.39■■■□□ 2.46
SSBP4-203ENST00000593641 KDM2BQ8NHM5 1336 aa30.38■■■□□ 2.45
SSBP4-203ENST00000593641 SCN7AQ01118 1682 aa30.37■■■□□ 2.45
SSBP4-203ENST00000593641 C16orf71Q8IYS4 520 aaPredicted RBP30.37■■■□□ 2.45
SSBP4-203ENST00000593641 PRKAR2BP31323 418 aa30.36■■■□□ 2.45
SSBP4-203ENST00000593641 APLP1P51693 650 aa30.36■■■□□ 2.45
SSBP4-203ENST00000593641 BICDL1Q6ZP65 573 aa30.36■■■□□ 2.45
SSBP4-203ENST00000593641 FMNL2Q96PY5 1086 aa30.36■■■□□ 2.45
SSBP4-203ENST00000593641 ZNF330Q9Y3S2 320 aaPredicted RBP30.36■■■□□ 2.45
SSBP4-203ENST00000593641 NPM2Q86SE8 214 aaKnown RBP30.35■■■□□ 2.45
SSBP4-203ENST00000593641 NUDCQ9Y266 331 aa30.35■■■□□ 2.45
SSBP4-203ENST00000593641 CEMIPQ8WUJ3 1361 aa30.35■■■□□ 2.45
SSBP4-203ENST00000593641 TNRC6CQ9HCJ0 1690 aaKnown RBP30.33■■■□□ 2.45
SSBP4-203ENST00000593641 C2CD5Q86YS7 1000 aa30.33■■■□□ 2.45
SSBP4-203ENST00000593641 TTLL6Q8N841 843 aa30.33■■■□□ 2.45
SSBP4-203ENST00000593641 RSPH6AQ9H0K4 717 aa30.33■■■□□ 2.45
SSBP4-203ENST00000593641 CARMIL3Q8ND23 1372 aa30.32■■■□□ 2.44
SSBP4-203ENST00000593641 BTBD11A6QL63 1104 aa30.32■■■□□ 2.44
SSBP4-203ENST00000593641 H0YIN7 160 aa30.32■■■□□ 2.44
SSBP4-203ENST00000593641 IL6STP40189 918 aaPredicted RBP30.32■■■□□ 2.44
SSBP4-203ENST00000593641 PHACTR3Q96KR7 559 aa30.32■■■□□ 2.44
SSBP4-203ENST00000593641 RBM46Q8TBY0 533 aaKnown RBP30.31■■■□□ 2.44
SSBP4-203ENST00000593641 CCDC88AQ3V6T2 1871 aa30.31■■■□□ 2.44
SSBP4-203ENST00000593641 ZC3H4Q9UPT8 1303 aaKnown RBP30.3■■■□□ 2.44
SSBP4-203ENST00000593641 ANKRD31Q8N7Z5 1873 aa30.3■■■□□ 2.44
SSBP4-203ENST00000593641 RASSF7Q02833 373 aa30.3■■■□□ 2.44
SSBP4-203ENST00000593641 TBC1D9BQ66K14 1250 aa30.3■■■□□ 2.44
SSBP4-203ENST00000593641 TBC1D2BQ9UPU7 963 aa30.3■■■□□ 2.44
SSBP4-203ENST00000593641 U2AF1L5P0DN76 240 aaPredicted RBP30.28■■■□□ 2.44
SSBP4-203ENST00000593641 U2AF1Q01081 240 aaKnown RBP eCLIP30.28■■■□□ 2.44
SSBP4-203ENST00000593641 RTF1Q92541 710 aaKnown RBP30.28■■■□□ 2.44
SSBP4-203ENST00000593641 A1BGP04217 495 aa30.27■■■□□ 2.44
SSBP4-203ENST00000593641 LMNB1P20700 586 aa30.27■■■□□ 2.44
SSBP4-203ENST00000593641 PDZRN3Q9UPQ7 1066 aa30.27■■■□□ 2.44
SSBP4-203ENST00000593641 BCORQ6W2J9 1755 aa30.26■■■□□ 2.43
SSBP4-203ENST00000593641 WDR90Q96KV7 1748 aa30.25■■■□□ 2.43
SSBP4-203ENST00000593641 PPP2R1AP30153 589 aa30.25■■■□□ 2.43
SSBP4-203ENST00000593641 RRAGCQ9HB90 399 aa30.25■■■□□ 2.43
SSBP4-203ENST00000593641 TIAM2Q8IVF5 1701 aa30.25■■■□□ 2.43
SSBP4-203ENST00000593641 NPHP1O15259 732 aa30.24■■■□□ 2.43
SSBP4-203ENST00000593641 KCNQ3O43525 872 aa30.24■■■□□ 2.43
SSBP4-203ENST00000593641 PDE6BP35913 854 aa30.24■■■□□ 2.43
SSBP4-203ENST00000593641 BRIP1Q9BX63 1249 aa30.24■■■□□ 2.43
SSBP4-203ENST00000593641 COL11A2P13942 1736 aaPredicted RBP30.23■■■□□ 2.43
SSBP4-203ENST00000593641 FSTL1Q12841 308 aa30.23■■■□□ 2.43
SSBP4-203ENST00000593641 PRR5LQ6MZQ0 368 aa30.23■■■□□ 2.43
SSBP4-203ENST00000593641 ZNF622Q969S3 477 aaKnown RBP eCLIP30.23■■■□□ 2.43
SSBP4-203ENST00000593641 SETDB2Q96T68 719 aa30.23■■■□□ 2.43
SSBP4-203ENST00000593641 IFFO2Q5TF58 517 aa30.22■■■□□ 2.43
SSBP4-203ENST00000593641 CAMTA2O94983 1202 aa30.21■■■□□ 2.43
SSBP4-203ENST00000593641 DZIP3Q86Y13 1208 aaKnown RBP30.21■■■□□ 2.43
SSBP4-203ENST00000593641 CNBD1Q8NA66 436 aa30.21■■■□□ 2.43
SSBP4-203ENST00000593641 MCM10Q7L590 875 aa30.2■■■□□ 2.43
SSBP4-203ENST00000593641 CACNA1SQ13698 1873 aa30.2■■■□□ 2.42
SSBP4-203ENST00000593641 ST5P78524 1137 aa30.19■■■□□ 2.42
SSBP4-203ENST00000593641 CCDC24Q8N4L8 307 aa30.19■■■□□ 2.42
SSBP4-203ENST00000593641 USP16Q9Y5T5 823 aa30.19■■■□□ 2.42
SSBP4-203ENST00000593641 NFKBIEO00221 500 aa30.18■■■□□ 2.42
SSBP4-203ENST00000593641 SNRPA1P09661 255 aaKnown RBP30.18■■■□□ 2.42
SSBP4-203ENST00000593641 FER1L6Q2WGJ9 1857 aa30.17■■■□□ 2.42
SSBP4-203ENST00000593641 GLTPD2A6NH11 291 aa30.17■■■□□ 2.42
SSBP4-203ENST00000593641 PRELPP51888 382 aa30.17■■■□□ 2.42
SSBP4-203ENST00000593641 DICER1Q9UPY3 1922 aaKnown RBP30.17■■■□□ 2.42
SSBP4-203ENST00000593641 SMC1BQ8NDV3 1235 aa30.16■■■□□ 2.42
SSBP4-203ENST00000593641 HTATSF1O43719 755 aaKnown RBP30.15■■■□□ 2.42
SSBP4-203ENST00000593641 PIP4K2AP48426 406 aaPredicted RBP30.15■■■□□ 2.42
SSBP4-203ENST00000593641 DNAJC5GQ8N7S2 189 aa30.15■■■□□ 2.42
SSBP4-203ENST00000593641 ZNF219Q9P2Y4 722 aaPredicted RBP30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms