RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CHRNA5P30532 468 aa22.17■■□□□ 1.14
LIG1-205ENST00000593425 ZBTB1Q9Y2K1 713 aa22.16■■□□□ 1.14
LIG1-205ENST00000593425 DLEC1Q9Y238 1755 aa22.15■■□□□ 1.14
LIG1-205ENST00000593425 ZPR1O75312 459 aa22.15■■□□□ 1.14
LIG1-205ENST00000593425 DALRD3Q5D0E6 543 aaKnown RBP22.15■■□□□ 1.14
LIG1-205ENST00000593425 C9orf131Q5VYM1 1079 aa22.15■■□□□ 1.14
LIG1-205ENST00000593425 NMRK2Q9NPI5 230 aa22.15■■□□□ 1.14
LIG1-205ENST00000593425 SIPA1L3O60292 1781 aaPredicted RBP22.15■■□□□ 1.14
LIG1-205ENST00000593425 SBF1O95248 1867 aa22.14■■□□□ 1.13
LIG1-205ENST00000593425 NARFQ9UHQ1 456 aa22.13■■□□□ 1.13
LIG1-205ENST00000593425 CNGB1Q14028 1251 aaPredicted RBP22.12■■□□□ 1.13
LIG1-205ENST00000593425 NFIXQ14938 502 aa22.12■■□□□ 1.13
LIG1-205ENST00000593425 BCL2L12Q9HB09 334 aa22.12■■□□□ 1.13
LIG1-205ENST00000593425 TOMM70O94826 608 aa22.11■■□□□ 1.13
LIG1-205ENST00000593425 VSIG10Q8N0Z9 540 aa22.11■■□□□ 1.13
LIG1-205ENST00000593425 NPC1L1Q9UHC9 1359 aa22.11■■□□□ 1.13
LIG1-205ENST00000593425 SCN7AQ01118 1682 aa22.1■■□□□ 1.13
LIG1-205ENST00000593425 RNF181Q9P0P0 153 aa22.09■■□□□ 1.13
LIG1-205ENST00000593425 U2SURPO15042 1029 aaKnown RBP22.08■■□□□ 1.13
LIG1-205ENST00000593425 CANXP27824 592 aaKnown RBP22.08■■□□□ 1.13
LIG1-205ENST00000593425 CARMIL3Q8ND23 1372 aa22.08■■□□□ 1.12
LIG1-205ENST00000593425 TNRC6CQ9HCJ0 1690 aaKnown RBP22.07■■□□□ 1.12
LIG1-205ENST00000593425 WDR90Q96KV7 1748 aa22.07■■□□□ 1.12
LIG1-205ENST00000593425 SERPINB2P05120 415 aa22.07■■□□□ 1.12
LIG1-205ENST00000593425 TTC5Q8N0Z6 440 aa22.07■■□□□ 1.12
LIG1-205ENST00000593425 IL17REQ8NFR9 667 aa22.07■■□□□ 1.12
LIG1-205ENST00000593425 ZNF496Q96IT1 587 aaPredicted RBP22.06■■□□□ 1.12
LIG1-205ENST00000593425 ANKRD31Q8N7Z5 1873 aa22.06■■□□□ 1.12
LIG1-205ENST00000593425 HEG1Q9ULI3 1381 aa22.05■■□□□ 1.12
LIG1-205ENST00000593425 APLP1P51693 650 aa22.05■■□□□ 1.12
LIG1-205ENST00000593425 RASSF7Q02833 373 aa22.05■■□□□ 1.12
LIG1-205ENST00000593425 IFFO2Q5TF58 517 aa22.05■■□□□ 1.12
LIG1-205ENST00000593425 GNAT3A8MTJ3 354 aa22.04■■□□□ 1.12
LIG1-205ENST00000593425 EIF5P55010 431 aaKnown RBP22.04■■□□□ 1.12
LIG1-205ENST00000593425 TEFQ10587 303 aa22.04■■□□□ 1.12
LIG1-205ENST00000593425 GAS2L2Q8NHY3 880 aa22.04■■□□□ 1.12
LIG1-205ENST00000593425 COL11A2P13942 1736 aaPredicted RBP22.03■■□□□ 1.12
LIG1-205ENST00000593425 TIAM2Q8IVF5 1701 aa22.03■■□□□ 1.12
LIG1-205ENST00000593425 STARD3NLO95772 234 aa22.03■■□□□ 1.12
LIG1-205ENST00000593425 ZNF790Q6PG37 636 aa22.03■■□□□ 1.12
LIG1-205ENST00000593425 BICDL1Q6ZP65 573 aa22.03■■□□□ 1.12
LIG1-205ENST00000593425 CCDC88AQ3V6T2 1871 aa22.03■■□□□ 1.12
LIG1-205ENST00000593425 RBM46Q8TBY0 533 aaKnown RBP22.02■■□□□ 1.12
LIG1-205ENST00000593425 KDM2BQ8NHM5 1336 aa22.02■■□□□ 1.12
LIG1-205ENST00000593425 CEMIPQ8WUJ3 1361 aa22.01■■□□□ 1.11
LIG1-205ENST00000593425 PRELPP51888 382 aa22.01■■□□□ 1.11
LIG1-205ENST00000593425 C2CD5Q86YS7 1000 aa22.01■■□□□ 1.11
LIG1-205ENST00000593425 BCORQ6W2J9 1755 aa22.01■■□□□ 1.11
LIG1-205ENST00000593425 TBC1D9BQ66K14 1250 aa22■■□□□ 1.11
LIG1-205ENST00000593425 C16orf71Q8IYS4 520 aaPredicted RBP22■■□□□ 1.11
LIG1-205ENST00000593425 DNAJC5GQ8N7S2 189 aa22■■□□□ 1.11
LIG1-205ENST00000593425 RRAGCQ9HB90 399 aa22■■□□□ 1.11
LIG1-205ENST00000593425 A0A087WZG4 1122 aa21.99■■□□□ 1.11
LIG1-205ENST00000593425 PRKAR2BP31323 418 aa21.99■■□□□ 1.11
LIG1-205ENST00000593425 TTLL6Q8N841 843 aa21.99■■□□□ 1.11
LIG1-205ENST00000593425 PHACTR3Q96KR7 559 aa21.99■■□□□ 1.11
LIG1-205ENST00000593425 ZNF330Q9Y3S2 320 aaPredicted RBP21.99■■□□□ 1.11
LIG1-205ENST00000593425 KCNQ3O43525 872 aa21.98■■□□□ 1.11
LIG1-205ENST00000593425 RSPH6AQ9H0K4 717 aa21.98■■□□□ 1.11
LIG1-205ENST00000593425 TBC1D2BQ9UPU7 963 aa21.98■■□□□ 1.11
LIG1-205ENST00000593425 FMNL2Q96PY5 1086 aa21.97■■□□□ 1.11
LIG1-205ENST00000593425 TEX13AQ9BXU3 409 aaPredicted RBP21.97■■□□□ 1.11
LIG1-205ENST00000593425 H0YIN7 160 aa21.96■■□□□ 1.11
LIG1-205ENST00000593425 A1BGP04217 495 aa21.96■■□□□ 1.11
LIG1-205ENST00000593425 LMNB1P20700 586 aa21.96■■□□□ 1.11
LIG1-205ENST00000593425 IL6STP40189 918 aaPredicted RBP21.96■■□□□ 1.11
LIG1-205ENST00000593425 HTRA3P83110 453 aa21.96■■□□□ 1.11
LIG1-205ENST00000593425 CCDC24Q8N4L8 307 aa21.96■■□□□ 1.11
LIG1-205ENST00000593425 ZC3H4Q9UPT8 1303 aaKnown RBP21.96■■□□□ 1.11
LIG1-205ENST00000593425 CACNA1SQ13698 1873 aa21.96■■□□□ 1.11
LIG1-205ENST00000593425 NFKBIEO00221 500 aa21.95■■□□□ 1.1
LIG1-205ENST00000593425 FSTL1Q12841 308 aa21.95■■□□□ 1.1
LIG1-205ENST00000593425 PRR5LQ6MZQ0 368 aa21.95■■□□□ 1.1
LIG1-205ENST00000593425 FER1L6Q2WGJ9 1857 aa21.94■■□□□ 1.1
LIG1-205ENST00000593425 BTBD11A6QL63 1104 aa21.94■■□□□ 1.1
LIG1-205ENST00000593425 CFAP53Q96M91 514 aa21.94■■□□□ 1.1
LIG1-205ENST00000593425 CAMTA2O94983 1202 aa21.93■■□□□ 1.1
LIG1-205ENST00000593425 PIP4K2AP48426 406 aaPredicted RBP21.92■■□□□ 1.1
LIG1-205ENST00000593425 ZNF622Q969S3 477 aaKnown RBP eCLIP21.92■■□□□ 1.19e-7■■□□□ 11.8
LIG1-205ENST00000593425 DICER1Q9UPY3 1922 aaKnown RBP21.92■■□□□ 1.1
LIG1-205ENST00000593425 ARFGEF2Q9Y6D5 1785 aa21.92■■□□□ 1.1
LIG1-205ENST00000593425 PRAMEF22A3QJZ6 481 aa21.91■■□□□ 1.1
LIG1-205ENST00000593425 GLTPD2A6NH11 291 aa21.91■■□□□ 1.1
LIG1-205ENST00000593425 BRIP1Q9BX63 1249 aa21.91■■□□□ 1.1
LIG1-205ENST00000593425 USP16Q9Y5T5 823 aa21.91■■□□□ 1.1
LIG1-205ENST00000593425 PPP2R1AP30153 589 aa21.9■■□□□ 1.1
LIG1-205ENST00000593425 PDE6BP35913 854 aa21.9■■□□□ 1.1
LIG1-205ENST00000593425 ZNF219Q9P2Y4 722 aaPredicted RBP21.9■■□□□ 1.1
LIG1-205ENST00000593425 SLX4Q8IY92 1834 aa21.9■■□□□ 1.1
LIG1-205ENST00000593425 C21orf2O43822 256 aa21.89■■□□□ 1.09
LIG1-205ENST00000593425 MCM10Q7L590 875 aa21.89■■□□□ 1.09
LIG1-205ENST00000593425 DZIP3Q86Y13 1208 aaKnown RBP21.89■■□□□ 1.09
LIG1-205ENST00000593425 NUDCQ9Y266 331 aa21.89■■□□□ 1.09
LIG1-205ENST00000593425 U2AF1L5P0DN76 240 aaPredicted RBP21.88■■□□□ 1.09
LIG1-205ENST00000593425 U2AF1Q01081 240 aaKnown RBP eCLIP21.88■■□□□ 1.09
LIG1-205ENST00000593425 NPM2Q86SE8 214 aaKnown RBP21.88■■□□□ 1.09
LIG1-205ENST00000593425 CNBD1Q8NA66 436 aa21.88■■□□□ 1.09
LIG1-205ENST00000593425 SMC1BQ8NDV3 1235 aa21.88■■□□□ 1.09
LIG1-205ENST00000593425 KLRG1Q96E93 195 aa21.88■■□□□ 1.09
LIG1-205ENST00000593425 SETDB2Q96T68 719 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms