RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 FMNL2Q96PY5 1086 aa14.9□□□□□ -0.02
NPC1-214ENST00000593280 ZBTB47Q9UFB7 747 aaPredicted RBP14.9□□□□□ -0.02
NPC1-214ENST00000593280 TOGARAM1Q9Y4F4 1720 aa14.9□□□□□ -0.02
NPC1-214ENST00000593280 PI4KAP2A4QPH2 592 aa14.89□□□□□ -0.03
NPC1-214ENST00000593280 TOM1O60784 492 aa14.89□□□□□ -0.03
NPC1-214ENST00000593280 NKX1-1Q15270 411 aaPredicted RBP14.89□□□□□ -0.03
NPC1-214ENST00000593280 PROSER3Q2NL68 480 aa14.89□□□□□ -0.03
NPC1-214ENST00000593280 PI4KAP1Q8N8J0 262 aa14.89□□□□□ -0.03
NPC1-214ENST00000593280 ZNF496Q96IT1 587 aaPredicted RBP14.89□□□□□ -0.03
NPC1-214ENST00000593280 DDX21Q9NR30 783 aaKnown RBP eCLIP14.89□□□□□ -0.03
NPC1-214ENST00000593280 ERVV-2B6SEH9 535 aa14.88□□□□□ -0.03
NPC1-214ENST00000593280 SNRPA1P09661 255 aaKnown RBP14.88□□□□□ -0.03
NPC1-214ENST00000593280 UBTFL1P0CB47 393 aaPredicted RBP14.88□□□□□ -0.03
NPC1-214ENST00000593280 USP35Q9P2H5 1018 aa14.88□□□□□ -0.03
NPC1-214ENST00000593280 NRAPQ86VF7 1730 aa14.88□□□□□ -0.03
NPC1-214ENST00000593280 DDX58O95786 925 aaKnown RBP14.88□□□□□ -0.03
NPC1-214ENST00000593280 BEND3Q5T5X7 828 aa14.88□□□□□ -0.03
NPC1-214ENST00000593280 DDX54Q8TDD1 881 aaKnown RBP14.88□□□□□ -0.03
NPC1-214ENST00000593280 USP44Q9H0E7 712 aa14.88□□□□□ -0.03
NPC1-214ENST00000593280 DISP2A7MBM2 1401 aa14.87□□□□□ -0.03
NPC1-214ENST00000593280 KSR2Q6VAB6 950 aa14.87□□□□□ -0.03
NPC1-214ENST00000593280 DDRGK1Q96HY6 314 aa14.87□□□□□ -0.03
NPC1-214ENST00000593280 LRRFIP2Q9Y608 721 aaKnown RBP14.87□□□□□ -0.03
NPC1-214ENST00000593280 PDIA6Q15084 440 aa14.86□□□□□ -0.03
NPC1-214ENST00000593280 ERICH6Q7L0X2 663 aa14.86□□□□□ -0.03
NPC1-214ENST00000593280 MAP3K2Q9Y2U5 619 aa14.86□□□□□ -0.03
NPC1-214ENST00000593280 KCPQ6ZWJ8 1503 aa14.86□□□□□ -0.03
NPC1-214ENST00000593280 ALDH1L1O75891 902 aa14.85□□□□□ -0.03
NPC1-214ENST00000593280 NOP58Q9Y2X3 529 aaKnown RBP14.85□□□□□ -0.03
NPC1-214ENST00000593280 SEC24BO95487 1268 aa14.84□□□□□ -0.03
NPC1-214ENST00000593280 PIP4K2BP78356 416 aa14.84□□□□□ -0.03
NPC1-214ENST00000593280 ATP8B2P98198 1209 aa14.84□□□□□ -0.03
NPC1-214ENST00000593280 BMP2KLQ5H9B9 411 aa14.84□□□□□ -0.03
NPC1-214ENST00000593280 UPF2Q9HAU5 1272 aaKnown RBP14.84□□□□□ -0.03
NPC1-214ENST00000593280 NWD2Q9ULI1 1742 aa14.84□□□□□ -0.03
NPC1-214ENST00000593280 ITGB4P16144 1822 aa14.84□□□□□ -0.03
NPC1-214ENST00000593280 HSPA1LP34931 641 aa14.84□□□□□ -0.03
NPC1-214ENST00000593280 LRP6O75581 1613 aa14.84□□□□□ -0.03
NPC1-214ENST00000593280 ARFGEF2Q9Y6D5 1785 aa14.83□□□□□ -0.03
NPC1-214ENST00000593280 TNS2Q63HR2 1409 aa14.83□□□□□ -0.03
NPC1-214ENST00000593280 MYL6BP14649 208 aa14.83□□□□□ -0.04
NPC1-214ENST00000593280 AIMP1Q12904 312 aaKnown RBP14.83□□□□□ -0.04
NPC1-214ENST00000593280 USP16Q9Y5T5 823 aa14.83□□□□□ -0.04
NPC1-214ENST00000593280 AFDNP55196 1824 aaKnown RBP14.82□□□□□ -0.04
NPC1-214ENST00000593280 PNMA6EA0A0J9YXQ4 647 aa14.82□□□□□ -0.04
NPC1-214ENST00000593280 APBB1O00213 710 aa14.82□□□□□ -0.04
NPC1-214ENST00000593280 ADAMTS2O95450 1211 aa14.81□□□□□ -0.04
NPC1-214ENST00000593280 NBPF7P0C2Y1 421 aaPredicted RBP14.81□□□□□ -0.04
NPC1-214ENST00000593280 RIC3Q7Z5B4 369 aa14.81□□□□□ -0.04
NPC1-214ENST00000593280 PLEKHM2Q8IWE5 1019 aa14.81□□□□□ -0.04
NPC1-214ENST00000593280 LINS1Q8NG48 757 aa14.81□□□□□ -0.04
NPC1-214ENST00000593280 XAGE3Q8WTP9 111 aa14.81□□□□□ -0.04
NPC1-214ENST00000593280 TMOD3Q9NYL9 352 aa14.81□□□□□ -0.04
NPC1-214ENST00000593280 ERBB4Q15303 1308 aa14.81□□□□□ -0.04
NPC1-214ENST00000593280 SMARCA5O60264 1052 aaPredicted RBP14.81□□□□□ -0.04
NPC1-214ENST00000593280 C9orf78Q9NZ63 289 aaPredicted RBP14.81□□□□□ -0.04
NPC1-214ENST00000593280 HDAC5Q9UQL6 1122 aa14.81□□□□□ -0.04
NPC1-214ENST00000593280 EXOC6BQ9Y2D4 811 aa14.81□□□□□ -0.04
NPC1-214ENST00000593280 IBTKQ9P2D0 1353 aaPredicted RBP14.8□□□□□ -0.04
NPC1-214ENST00000593280 NEXNQ0ZGT2 675 aa14.8□□□□□ -0.04
NPC1-214ENST00000593280 COPS6Q7L5N1 327 aa14.8□□□□□ -0.04
NPC1-214ENST00000593280 SSH3Q8TE77 659 aa14.8□□□□□ -0.04
NPC1-214ENST00000593280 BCL11AQ9H165 835 aa14.8□□□□□ -0.04
NPC1-214ENST00000593280 NUP188Q5SRE5 1749 aa14.79□□□□□ -0.04
NPC1-214ENST00000593280 POLA2Q14181 598 aa14.79□□□□□ -0.04
NPC1-214ENST00000593280 CWF19L2Q2TBE0 894 aaKnown RBP14.79□□□□□ -0.04
NPC1-214ENST00000593280 LRP10Q7Z4F1 713 aa14.79□□□□□ -0.04
NPC1-214ENST00000593280 PPP1R42Q7Z4L9 355 aa14.79□□□□□ -0.04
NPC1-214ENST00000593280 C16orf71Q8IYS4 520 aaPredicted RBP14.79□□□□□ -0.04
NPC1-214ENST00000593280 LRRCC1Q9C099 1032 aa14.79□□□□□ -0.04
NPC1-214ENST00000593280 DOT1LQ8TEK3 1739 aa14.79□□□□□ -0.04
NPC1-214ENST00000593280 NUTM2BA6NNL0 878 aaPredicted RBP14.78□□□□□ -0.04
NPC1-214ENST00000593280 NUTM2EB1AL46 878 aaPredicted RBP14.78□□□□□ -0.04
NPC1-214ENST00000593280 TTC22Q5TAA0 569 aa14.78□□□□□ -0.04
NPC1-214ENST00000593280 NUTM2AQ8IVF1 878 aaPredicted RBP14.78□□□□□ -0.04
NPC1-214ENST00000593280 TBC1D32Q96NH3 1257 aa14.78□□□□□ -0.04
NPC1-214ENST00000593280 GRM8O00222 908 aa14.77□□□□□ -0.04
NPC1-214ENST00000593280 SRGAP3O43295 1099 aa14.77□□□□□ -0.04
NPC1-214ENST00000593280 PTCD1O75127 700 aaKnown RBP14.77□□□□□ -0.04
NPC1-214ENST00000593280 PIP4K2AP48426 406 aaPredicted RBP14.77□□□□□ -0.04
NPC1-214ENST00000593280 MFAP1P55081 439 aaKnown RBP14.77□□□□□ -0.04
NPC1-214ENST00000593280 ANKRD13DQ6ZTN6 518 aa14.77□□□□□ -0.04
NPC1-214ENST00000593280 OTUD7AQ8TE49 926 aaPredicted RBP14.77□□□□□ -0.04
NPC1-214ENST00000593280 METTL22Q9BUU2 404 aaPredicted RBP14.77□□□□□ -0.04
NPC1-214ENST00000593280 CDCA7Q9BWT1 371 aaPredicted RBP14.77□□□□□ -0.04
NPC1-214ENST00000593280 UTYO14607 1347 aa14.77□□□□□ -0.05
NPC1-214ENST00000593280 SPATA31A1Q5TZJ5 1347 aa14.77□□□□□ -0.05
NPC1-214ENST00000593280 EXOC5O00471 708 aa14.77□□□□□ -0.05
NPC1-214ENST00000593280 GSPT1P15170 499 aaKnown RBP14.77□□□□□ -0.05
NPC1-214ENST00000593280 THRAP3Q9Y2W1 955 aaKnown RBP14.77□□□□□ -0.05
NPC1-214ENST00000593280 TUBGCP6Q96RT7 1819 aa14.76□□□□□ -0.05
NPC1-214ENST00000593280 SLIT2O94813 1529 aa14.76□□□□□ -0.05
NPC1-214ENST00000593280 RAB11FIP3O75154 756 aa14.76□□□□□ -0.05
NPC1-214ENST00000593280 CDC45O75419 566 aa14.76□□□□□ -0.05
NPC1-214ENST00000593280 IGKV5-2P06315 115 aa14.76□□□□□ -0.05
NPC1-214ENST00000593280 MTX1Q13505 466 aa14.76□□□□□ -0.05
NPC1-214ENST00000593280 MYD88Q99836 296 aa14.76□□□□□ -0.05
NPC1-214ENST00000593280 NEURL1BA8MQ27 555 aa14.75□□□□□ -0.05
NPC1-214ENST00000593280 PIGBQ92521 554 aa14.75□□□□□ -0.05
NPC1-214ENST00000593280 DAXXQ9UER7 740 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms