RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 RRAGCQ9HB90 399 aa17.84■□□□□ 0.45
H3F3B-213ENST00000593254 RNF181Q9P0P0 153 aa17.84■□□□□ 0.45
H3F3B-213ENST00000593254 PRELPP51888 382 aa17.83■□□□□ 0.44
H3F3B-213ENST00000593254 TNS4Q8IZW8 715 aa17.83■□□□□ 0.44
H3F3B-213ENST00000593254 CAPN15O75808 1086 aa17.82■□□□□ 0.44
H3F3B-213ENST00000593254 HMOX1P09601 288 aa17.82■□□□□ 0.44
H3F3B-213ENST00000593254 CABP4P57796 275 aa17.82■□□□□ 0.44
H3F3B-213ENST00000593254 DDR1Q08345 913 aa17.82■□□□□ 0.44
H3F3B-213ENST00000593254 SMC1BQ8NDV3 1235 aa17.82■□□□□ 0.44
H3F3B-213ENST00000593254 ADAMTS7Q9UKP4 1686 aa17.82■□□□□ 0.44
H3F3B-213ENST00000593254 USP42Q9H9J4 1324 aaKnown RBP17.81■□□□□ 0.44
H3F3B-213ENST00000593254 CNGB1Q14028 1251 aaPredicted RBP17.81■□□□□ 0.44
H3F3B-213ENST00000593254 FKBP8Q14318 412 aa17.81■□□□□ 0.44
H3F3B-213ENST00000593254 AKAP4Q5JQC9 854 aa17.81■□□□□ 0.44
H3F3B-213ENST00000593254 ZC3H4Q9UPT8 1303 aaKnown RBP17.8■□□□□ 0.44
H3F3B-213ENST00000593254 SRP68Q9UHB9 627 aaKnown RBP17.8■□□□□ 0.44
H3F3B-213ENST00000593254 TJP1Q07157 1748 aa17.79■□□□□ 0.44
H3F3B-213ENST00000593254 CHRNA5P30532 468 aa17.79■□□□□ 0.44
H3F3B-213ENST00000593254 CRKLP46109 303 aaKnown RBP17.79■□□□□ 0.44
H3F3B-213ENST00000593254 NFATC2IPQ8NCF5 419 aa17.79■□□□□ 0.44
H3F3B-213ENST00000593254 MRC1P22897 1456 aa17.79■□□□□ 0.44
H3F3B-213ENST00000593254 POLRMTO00411 1230 aaKnown RBP17.77■□□□□ 0.44
H3F3B-213ENST00000593254 TM4SF1P30408 202 aa17.77■□□□□ 0.44
H3F3B-213ENST00000593254 MTHFSDQ2M296 383 aaKnown RBP17.77■□□□□ 0.44
H3F3B-213ENST00000593254 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.43
H3F3B-213ENST00000593254 PTCD1O75127 700 aaKnown RBP17.76■□□□□ 0.43
H3F3B-213ENST00000593254 SLC52A2Q9HAB3 445 aa17.76■□□□□ 0.43
H3F3B-213ENST00000593254 DLEC1Q9Y238 1755 aa17.76■□□□□ 0.43
H3F3B-213ENST00000593254 CCDC88AQ3V6T2 1871 aa17.75■□□□□ 0.43
H3F3B-213ENST00000593254 NRXN2Q9P2S2 1712 aa17.75■□□□□ 0.43
H3F3B-213ENST00000593254 U2SURPO15042 1029 aaKnown RBP17.75■□□□□ 0.43
H3F3B-213ENST00000593254 LGR6Q9HBX8 967 aa17.75■□□□□ 0.43
H3F3B-213ENST00000593254 GLTPD2A6NH11 291 aa17.74■□□□□ 0.43
H3F3B-213ENST00000593254 RNMTO43148 476 aaKnown RBP17.74■□□□□ 0.43
H3F3B-213ENST00000593254 HSPA1AP0DMV8 641 aaKnown RBP17.74■□□□□ 0.43
H3F3B-213ENST00000593254 HSPA1BP0DMV9 641 aaKnown RBP17.74■□□□□ 0.43
H3F3B-213ENST00000593254 RASSF7Q02833 373 aa17.74■□□□□ 0.43
H3F3B-213ENST00000593254 INTS5Q6P9B9 1019 aaKnown RBP17.74■□□□□ 0.43
H3F3B-213ENST00000593254 TIAM2Q8IVF5 1701 aa17.73■□□□□ 0.43
H3F3B-213ENST00000593254 VEGFAP15692 232 aaPredicted RBP17.73■□□□□ 0.43
H3F3B-213ENST00000593254 LMNB1P20700 586 aa17.73■□□□□ 0.43
H3F3B-213ENST00000593254 CFAP53Q96M91 514 aa17.73■□□□□ 0.43
H3F3B-213ENST00000593254 UBR2Q8IWV8 1755 aa17.72■□□□□ 0.43
H3F3B-213ENST00000593254 PPP2R1AP30153 589 aa17.72■□□□□ 0.43
H3F3B-213ENST00000593254 NCBP3Q53F19 620 aaKnown RBP17.72■□□□□ 0.43
H3F3B-213ENST00000593254 SIPA1L3O60292 1781 aaPredicted RBP17.71■□□□□ 0.43
H3F3B-213ENST00000593254 POTECB2RU33 542 aa17.7■□□□□ 0.42
H3F3B-213ENST00000593254 USPL1Q5W0Q7 1092 aa17.7■□□□□ 0.42
H3F3B-213ENST00000593254 GAS2L2Q8NHY3 880 aa17.7■□□□□ 0.42
H3F3B-213ENST00000593254 SOS1Q07889 1333 aaPredicted RBP17.7■□□□□ 0.42
H3F3B-213ENST00000593254 ZPR1O75312 459 aa17.69■□□□□ 0.42
H3F3B-213ENST00000593254 RSPH6AQ9H0K4 717 aa17.69■□□□□ 0.42
H3F3B-213ENST00000593254 SLC39A6Q13433 755 aa17.68■□□□□ 0.42
H3F3B-213ENST00000593254 NFIXQ14938 502 aa17.68■□□□□ 0.42
H3F3B-213ENST00000593254 NUDCQ9Y266 331 aa17.68■□□□□ 0.42
H3F3B-213ENST00000593254 DICER1Q9UPY3 1922 aaKnown RBP17.68■□□□□ 0.42
H3F3B-213ENST00000593254 GNAT3A8MTJ3 354 aa17.67■□□□□ 0.42
H3F3B-213ENST00000593254 NFKBIEO00221 500 aa17.67■□□□□ 0.42
H3F3B-213ENST00000593254 PRKAR2BP31323 418 aa17.67■□□□□ 0.42
H3F3B-213ENST00000593254 TTLL6Q8N841 843 aa17.67■□□□□ 0.42
H3F3B-213ENST00000593254 DNAJC10Q8IXB1 793 aa17.66■□□□□ 0.42
H3F3B-213ENST00000593254 IL17REQ8NFR9 667 aa17.66■□□□□ 0.42
H3F3B-213ENST00000593254 PHACTR3Q96KR7 559 aa17.66■□□□□ 0.42
H3F3B-213ENST00000593254 BCL2L12Q9HB09 334 aa17.66■□□□□ 0.42
H3F3B-213ENST00000593254 NARFQ9UHQ1 456 aa17.66■□□□□ 0.42
H3F3B-213ENST00000593254 CYP19A1P11511 503 aaPredicted RBP17.65■□□□□ 0.42
H3F3B-213ENST00000593254 C1QBPQ07021 282 aaKnown RBP17.65■□□□□ 0.42
H3F3B-213ENST00000593254 FER1L6Q2WGJ9 1857 aa17.65■□□□□ 0.42
H3F3B-213ENST00000593254 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
H3F3B-213ENST00000593254 U2AF1L5P0DN76 240 aaPredicted RBP17.64■□□□□ 0.41
H3F3B-213ENST00000593254 U2AF1Q01081 240 aaKnown RBP eCLIP17.64■□□□□ 0.41
H3F3B-213ENST00000593254 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
H3F3B-213ENST00000593254 COL15A1P39059 1388 aa17.64■□□□□ 0.41
H3F3B-213ENST00000593254 SERPINB2P05120 415 aa17.63■□□□□ 0.41
H3F3B-213ENST00000593254 TEFQ10587 303 aa17.63■□□□□ 0.41
H3F3B-213ENST00000593254 CARMIL3Q8ND23 1372 aa17.63■□□□□ 0.41
H3F3B-213ENST00000593254 ANKRD31Q8N7Z5 1873 aa17.63■□□□□ 0.41
H3F3B-213ENST00000593254 C2CD5Q86YS7 1000 aa17.62■□□□□ 0.41
H3F3B-213ENST00000593254 CREBZFQ9NS37 354 aa17.62■□□□□ 0.41
H3F3B-213ENST00000593254 ZBTB1Q9Y2K1 713 aa17.62■□□□□ 0.41
H3F3B-213ENST00000593254 H0YIN7 160 aa17.61■□□□□ 0.41
H3F3B-213ENST00000593254 DPY19L2Q6NUT2 758 aa17.61■□□□□ 0.41
H3F3B-213ENST00000593254 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
H3F3B-213ENST00000593254 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
H3F3B-213ENST00000593254 DLG5Q8TDM6 1919 aa17.6■□□□□ 0.41
H3F3B-213ENST00000593254 COL11A2P13942 1736 aaPredicted RBP17.59■□□□□ 0.41
H3F3B-213ENST00000593254 ZNF496Q96IT1 587 aaPredicted RBP17.59■□□□□ 0.41
H3F3B-213ENST00000593254 HEG1Q9ULI3 1381 aa17.58■□□□□ 0.4
H3F3B-213ENST00000593254 CHADLQ6NUI6 762 aa17.58■□□□□ 0.4
H3F3B-213ENST00000593254 MKRN1Q9UHC7 482 aaKnown RBP17.58■□□□□ 0.4
H3F3B-213ENST00000593254 LTBP3Q9NS15 1303 aa17.57■□□□□ 0.4
H3F3B-213ENST00000593254 ERFEQ4G0M1 354 aa17.57■□□□□ 0.4
H3F3B-213ENST00000593254 CNTNAP1P78357 1384 aa17.56■□□□□ 0.4
H3F3B-213ENST00000593254 FOXN1O15353 648 aa17.56■□□□□ 0.4
H3F3B-213ENST00000593254 STARD3NLO95772 234 aa17.56■□□□□ 0.4
H3F3B-213ENST00000593254 POTEIP0CG38 1075 aa17.56■□□□□ 0.4
H3F3B-213ENST00000593254 POTEJP0CG39 1038 aa17.56■□□□□ 0.4
H3F3B-213ENST00000593254 PRDM10Q9NQV6 1147 aa17.56■□□□□ 0.4
H3F3B-213ENST00000593254 PDZRN3Q9UPQ7 1066 aa17.56■□□□□ 0.4
H3F3B-213ENST00000593254 PASKQ96RG2 1323 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms