RNA–Protein interactions for RNA: ENST00000593112.1

BECN1-219, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-219ENST00000593112 COL15A1P39059 1388 aa23.29■■□□□ 1.32
BECN1-219ENST00000593112 BTBD11A6QL63 1104 aa23.29■■□□□ 1.32
BECN1-219ENST00000593112 FKBP8Q14318 412 aa23.29■■□□□ 1.32
BECN1-219ENST00000593112 RTF1Q92541 710 aaKnown RBP23.29■■□□□ 1.32
BECN1-219ENST00000593112 MYBBP1AQ9BQG0 1328 aaKnown RBP23.29■■□□□ 1.32
BECN1-219ENST00000593112 C10orf71Q711Q0 1435 aa23.28■■□□□ 1.32
BECN1-219ENST00000593112 HTATSF1O43719 755 aaKnown RBP23.27■■□□□ 1.32
BECN1-219ENST00000593112 SCN7AQ01118 1682 aa23.26■■□□□ 1.31
BECN1-219ENST00000593112 PXDNLA1KZ92 1463 aa23.26■■□□□ 1.31
BECN1-219ENST00000593112 CANXP27824 592 aaKnown RBP23.26■■□□□ 1.31
BECN1-219ENST00000593112 DDR1Q08345 913 aa23.26■■□□□ 1.31
BECN1-219ENST00000593112 USPL1Q5W0Q7 1092 aa23.26■■□□□ 1.31
BECN1-219ENST00000593112 FMNL2Q96PY5 1086 aa23.26■■□□□ 1.31
BECN1-219ENST00000593112 WWC3Q9ULE0 1092 aa23.26■■□□□ 1.31
BECN1-219ENST00000593112 PRAMEF22A3QJZ6 481 aa23.25■■□□□ 1.31
BECN1-219ENST00000593112 NFE2L2Q16236 605 aa23.25■■□□□ 1.31
BECN1-219ENST00000593112 NRXN2Q9P2S2 1712 aa23.25■■□□□ 1.31
BECN1-219ENST00000593112 LAMB4A4D0S4 1761 aa23.24■■□□□ 1.31
BECN1-219ENST00000593112 THUMPD2Q9BTF0 503 aaKnown RBP23.24■■□□□ 1.31
BECN1-219ENST00000593112 BCL2L12Q9HB09 334 aa23.24■■□□□ 1.31
BECN1-219ENST00000593112 BCORQ6W2J9 1755 aa23.23■■□□□ 1.31
BECN1-219ENST00000593112 STARD3NLO95772 234 aa23.23■■□□□ 1.31
BECN1-219ENST00000593112 EIF5P55010 431 aaKnown RBP23.23■■□□□ 1.31
BECN1-219ENST00000593112 NARFQ9UHQ1 456 aa23.23■■□□□ 1.31
BECN1-219ENST00000593112 A1BGP04217 495 aa23.22■■□□□ 1.31
BECN1-219ENST00000593112 TM4SF1P30408 202 aa23.22■■□□□ 1.31
BECN1-219ENST00000593112 ZEB1P37275 1124 aaPredicted RBP23.22■■□□□ 1.31
BECN1-219ENST00000593112 PRKRIP1Q9H875 184 aaPredicted RBP23.22■■□□□ 1.31
BECN1-219ENST00000593112 MIS18AQ9NYP9 233 aa23.22■■□□□ 1.31
BECN1-219ENST00000593112 USP16Q9Y5T5 823 aa23.22■■□□□ 1.31
BECN1-219ENST00000593112 PARP3Q9Y6F1 533 aa23.22■■□□□ 1.31
BECN1-219ENST00000593112 ZPR1O75312 459 aa23.21■■□□□ 1.31
BECN1-219ENST00000593112 NEFMP07197 916 aa23.21■■□□□ 1.31
BECN1-219ENST00000593112 TEX13AQ9BXU3 409 aaPredicted RBP23.21■■□□□ 1.31
BECN1-219ENST00000593112 MAPK8IP3Q9UPT6 1336 aa23.2■■□□□ 1.3
BECN1-219ENST00000593112 POLRMTO00411 1230 aaKnown RBP23.2■■□□□ 1.3
BECN1-219ENST00000593112 TAF7Q15545 349 aaPredicted RBP23.2■■□□□ 1.3
BECN1-219ENST00000593112 PIP4K2AP48426 406 aaPredicted RBP23.19■■□□□ 1.3
BECN1-219ENST00000593112 A0A0G2JLW4 131 aa23.18■■□□□ 1.3
BECN1-219ENST00000593112 NFIXQ14938 502 aa23.18■■□□□ 1.3
BECN1-219ENST00000593112 ARFGEF1Q9Y6D6 1849 aa23.17■■□□□ 1.3
BECN1-219ENST00000593112 GRIN3BO60391 1043 aa23.17■■□□□ 1.3
BECN1-219ENST00000593112 PNNQ9H307 717 aaKnown RBP23.17■■□□□ 1.3
BECN1-219ENST00000593112 ANKRD31Q8N7Z5 1873 aa23.16■■□□□ 1.3
BECN1-219ENST00000593112 SNRPA1P09661 255 aaKnown RBP23.16■■□□□ 1.3
BECN1-219ENST00000593112 IL6STP40189 918 aaPredicted RBP23.16■■□□□ 1.3
BECN1-219ENST00000593112 TGFB2P61812 414 aa23.16■■□□□ 1.3
BECN1-219ENST00000593112 CCDC146Q8IYE0 955 aa23.16■■□□□ 1.3
BECN1-219ENST00000593112 ZNF784Q8NCA9 323 aaPredicted RBP23.16■■□□□ 1.3
BECN1-219ENST00000593112 ZNF330Q9Y3S2 320 aaPredicted RBP23.16■■□□□ 1.3
BECN1-219ENST00000593112 DPEP1P16444 411 aa23.15■■□□□ 1.3
BECN1-219ENST00000593112 TBC1D2BQ9UPU7 963 aa23.15■■□□□ 1.3
BECN1-219ENST00000593112 DLEC1Q9Y238 1755 aa23.14■■□□□ 1.3
BECN1-219ENST00000593112 KCNA3P22001 575 aa23.14■■□□□ 1.29
BECN1-219ENST00000593112 TMPOP42166 694 aaKnown RBP23.14■■□□□ 1.29
BECN1-219ENST00000593112 RIPK4P57078 832 aa23.13■■□□□ 1.29
BECN1-219ENST00000593112 RRP7AQ9Y3A4 280 aaKnown RBP23.13■■□□□ 1.29
BECN1-219ENST00000593112 A0A087WZG4 1122 aa23.12■■□□□ 1.29
BECN1-219ENST00000593112 NBPF26B4DH59 902 aa23.12■■□□□ 1.29
BECN1-219ENST00000593112 CAMTA2O94983 1202 aa23.12■■□□□ 1.29
BECN1-219ENST00000593112 TBC1D9BQ66K14 1250 aa23.12■■□□□ 1.29
BECN1-219ENST00000593112 NBPF10Q6P3W6 841 aaKnown RBP23.12■■□□□ 1.29
BECN1-219ENST00000593112 NBPF15Q8N660 670 aa23.12■■□□□ 1.29
BECN1-219ENST00000593112 ADAMTS8Q9UP79 889 aa23.12■■□□□ 1.29
BECN1-219ENST00000593112 EIF4A1P60842 406 aaKnown RBP23.11■■□□□ 1.29
BECN1-219ENST00000593112 BICDL1Q6ZP65 573 aa23.11■■□□□ 1.29
BECN1-219ENST00000593112 CARMIL3Q8ND23 1372 aa23.11■■□□□ 1.29
BECN1-219ENST00000593112 SERPINB2P05120 415 aa23.1■■□□□ 1.29
BECN1-219ENST00000593112 WDR43Q15061 677 aaKnown RBP eCLIP23.1■■□□□ 1.29
BECN1-219ENST00000593112 PNISRQ8TF01 805 aaKnown RBP23.1■■□□□ 1.29
BECN1-219ENST00000593112 CHRNA5P30532 468 aa23.09■■□□□ 1.29
BECN1-219ENST00000593112 COL11A2P13942 1736 aaPredicted RBP23.08■■□□□ 1.29
BECN1-219ENST00000593112 NUP98P52948 1817 aa23.08■■□□□ 1.29
BECN1-219ENST00000593112 GIGYF1O75420 1035 aaPredicted RBP23.08■■□□□ 1.29
BECN1-219ENST00000593112 DZIP3Q86Y13 1208 aaKnown RBP23.08■■□□□ 1.29
BECN1-219ENST00000593112 RUNDC1Q96C34 613 aa23.08■■□□□ 1.29
BECN1-219ENST00000593112 BCS1LQ9Y276 419 aa23.08■■□□□ 1.29
BECN1-219ENST00000593112 NEUROD2Q15784 382 aa23.07■■□□□ 1.28
BECN1-219ENST00000593112 CCDC184Q52MB2 194 aa23.07■■□□□ 1.28
BECN1-219ENST00000593112 ZNF316A6NFI3 1004 aaPredicted RBP23.06■■□□□ 1.28
BECN1-219ENST00000593112 TRIM35Q9UPQ4 493 aa23.06■■□□□ 1.28
BECN1-219ENST00000593112 ADCY9O60503 1353 aa23.05■■□□□ 1.28
BECN1-219ENST00000593112 SBF1O95248 1867 aa23.05■■□□□ 1.28
BECN1-219ENST00000593112 CACNA1SQ13698 1873 aa23.05■■□□□ 1.28
BECN1-219ENST00000593112 TSPYL4Q9UJ04 414 aa23.04■■□□□ 1.28
BECN1-219ENST00000593112 CCDC24Q8N4L8 307 aa23.03■■□□□ 1.28
BECN1-219ENST00000593112 PIM2Q9P1W9 311 aa23.03■■□□□ 1.28
BECN1-219ENST00000593112 LMOD3Q0VAK6 560 aa23.02■■□□□ 1.28
BECN1-219ENST00000593112 NPM2Q86SE8 214 aaKnown RBP23.02■■□□□ 1.28
BECN1-219ENST00000593112 ATP10DQ9P241 1426 aa23.01■■□□□ 1.27
BECN1-219ENST00000593112 PRR5LQ6MZQ0 368 aa23.01■■□□□ 1.27
BECN1-219ENST00000593112 CCDC88AQ3V6T2 1871 aa23■■□□□ 1.27
BECN1-219ENST00000593112 HLFQ16534 295 aa22.99■■□□□ 1.27
BECN1-219ENST00000593112 KRT24Q2M2I5 525 aa22.98■■□□□ 1.27
BECN1-219ENST00000593112 DALRD3Q5D0E6 543 aaKnown RBP22.98■■□□□ 1.27
BECN1-219ENST00000593112 CLEC4GQ6UXB4 293 aa22.98■■□□□ 1.27
BECN1-219ENST00000593112 ARHGAP27Q6ZUM4 889 aa22.98■■□□□ 1.27
BECN1-219ENST00000593112 NGEFQ8N5V2 710 aa22.98■■□□□ 1.27
BECN1-219ENST00000593112 SETDB2Q96T68 719 aa22.98■■□□□ 1.27
BECN1-219ENST00000593112 BABAM1Q9NWV8 329 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms