RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 A0A0G2JLW4 131 aa17.43■□□□□ 0.38
PRKCSH-218ENST00000593053 KCNQ3O43525 872 aa17.43■□□□□ 0.38
PRKCSH-218ENST00000593053 FMNL2Q96PY5 1086 aa17.43■□□□□ 0.38
PRKCSH-218ENST00000593053 DCTN1Q14203 1278 aa17.42■□□□□ 0.38
PRKCSH-218ENST00000593053 NARFQ9UHQ1 456 aa17.42■□□□□ 0.38
PRKCSH-218ENST00000593053 CHD4Q14839 1912 aa17.42■□□□□ 0.38
PRKCSH-218ENST00000593053 POLRMTO00411 1230 aaKnown RBP17.41■□□□□ 0.38
PRKCSH-218ENST00000593053 DPEP1P16444 411 aa17.41■□□□□ 0.38
PRKCSH-218ENST00000593053 TM4SF1P30408 202 aa17.41■□□□□ 0.38
PRKCSH-218ENST00000593053 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
PRKCSH-218ENST00000593053 TEX13AQ9BXU3 409 aaPredicted RBP17.41■□□□□ 0.38
PRKCSH-218ENST00000593053 UBR2Q8IWV8 1755 aa17.4■□□□□ 0.38
PRKCSH-218ENST00000593053 VIRMAQ69YN4 1812 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-218ENST00000593053 HTATSF1O43719 755 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-218ENST00000593053 NEFMP07197 916 aa17.4■□□□□ 0.38
PRKCSH-218ENST00000593053 EIF5P55010 431 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-218ENST00000593053 NFIXQ14938 502 aa17.39■□□□□ 0.37
PRKCSH-218ENST00000593053 BCL2L12Q9HB09 334 aa17.39■□□□□ 0.37
PRKCSH-218ENST00000593053 BCS1LQ9Y276 419 aa17.39■□□□□ 0.37
PRKCSH-218ENST00000593053 ZNF330Q9Y3S2 320 aaPredicted RBP17.39■□□□□ 0.37
PRKCSH-218ENST00000593053 A0A087WZG4 1122 aa17.38■□□□□ 0.37
PRKCSH-218ENST00000593053 A1BGP04217 495 aa17.38■□□□□ 0.37
PRKCSH-218ENST00000593053 RALBP1Q15311 655 aa17.38■□□□□ 0.37
PRKCSH-218ENST00000593053 SIPA1L3O60292 1781 aaPredicted RBP17.38■□□□□ 0.37
PRKCSH-218ENST00000593053 PLEKHF1Q96S99 279 aa17.37■□□□□ 0.37
PRKCSH-218ENST00000593053 KIF13BQ9NQT8 1826 aa17.36■□□□□ 0.37
PRKCSH-218ENST00000593053 KCNA3P22001 575 aa17.36■□□□□ 0.37
PRKCSH-218ENST00000593053 USP16Q9Y5T5 823 aa17.36■□□□□ 0.37
PRKCSH-218ENST00000593053 ATP10DQ9P241 1426 aa17.36■□□□□ 0.37
PRKCSH-218ENST00000593053 KIAA1551Q9HCM1 1747 aa17.35■□□□□ 0.37
PRKCSH-218ENST00000593053 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
PRKCSH-218ENST00000593053 CHRNA5P30532 468 aa17.35■□□□□ 0.37
PRKCSH-218ENST00000593053 IL6STP40189 918 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-218ENST00000593053 TAF7Q15545 349 aaPredicted RBP17.35■□□□□ 0.37
PRKCSH-218ENST00000593053 BICDL1Q6ZP65 573 aa17.35■□□□□ 0.37
PRKCSH-218ENST00000593053 NPM2Q86SE8 214 aaKnown RBP17.35■□□□□ 0.37
PRKCSH-218ENST00000593053 TBC1D2BQ9UPU7 963 aa17.35■□□□□ 0.37
PRKCSH-218ENST00000593053 GIGYF1O75420 1035 aaPredicted RBP17.34■□□□□ 0.37
PRKCSH-218ENST00000593053 SERPINB2P05120 415 aa17.34■□□□□ 0.37
PRKCSH-218ENST00000593053 SNRPA1P09661 255 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-218ENST00000593053 NFE2L2Q16236 605 aa17.34■□□□□ 0.37
PRKCSH-218ENST00000593053 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
PRKCSH-218ENST00000593053 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
PRKCSH-218ENST00000593053 PIM2Q9P1W9 311 aa17.34■□□□□ 0.37
PRKCSH-218ENST00000593053 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
PRKCSH-218ENST00000593053 N4BP2Q86UW6 1770 aaPredicted RBP17.33■□□□□ 0.37
PRKCSH-218ENST00000593053 ADCY9O60503 1353 aa17.33■□□□□ 0.36
PRKCSH-218ENST00000593053 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.36
PRKCSH-218ENST00000593053 ARHGAP27Q6ZUM4 889 aa17.33■□□□□ 0.36
PRKCSH-218ENST00000593053 DALRD3Q5D0E6 543 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-218ENST00000593053 TBC1D9BQ66K14 1250 aa17.32■□□□□ 0.36
PRKCSH-218ENST00000593053 THUMPD2Q9BTF0 503 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-218ENST00000593053 MYBBP1AQ9BQG0 1328 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-218ENST00000593053 CAMTA2O94983 1202 aa17.31■□□□□ 0.36
PRKCSH-218ENST00000593053 C1QTNF8P60827 252 aa17.31■□□□□ 0.36
PRKCSH-218ENST00000593053 ZNF526Q8TF50 670 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-218ENST00000593053 DZIP3Q86Y13 1208 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-218ENST00000593053 PNISRQ8TF01 805 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-218ENST00000593053 GPBP1L1Q9HC44 474 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-218ENST00000593053 CARMIL3Q8ND23 1372 aa17.28■□□□□ 0.36
PRKCSH-218ENST00000593053 NBPF26B4DH59 902 aa17.28■□□□□ 0.36
PRKCSH-218ENST00000593053 NBPF10Q6P3W6 841 aaKnown RBP17.28■□□□□ 0.36
PRKCSH-218ENST00000593053 NBPF15Q8N660 670 aa17.28■□□□□ 0.36
PRKCSH-218ENST00000593053 C2CD5Q86YS7 1000 aa17.27■□□□□ 0.36
PRKCSH-218ENST00000593053 CCDC24Q8N4L8 307 aa17.27■□□□□ 0.36
PRKCSH-218ENST00000593053 SETDB2Q96T68 719 aa17.27■□□□□ 0.36
PRKCSH-218ENST00000593053 RIPK4P57078 832 aa17.26■□□□□ 0.35
PRKCSH-218ENST00000593053 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-218ENST00000593053 PRR5LQ6MZQ0 368 aa17.26■□□□□ 0.35
PRKCSH-218ENST00000593053 NRXN2Q9P2S2 1712 aa17.26■□□□□ 0.35
PRKCSH-218ENST00000593053 SCN7AQ01118 1682 aa17.26■□□□□ 0.35
PRKCSH-218ENST00000593053 H0YIN7 160 aa17.25■□□□□ 0.35
PRKCSH-218ENST00000593053 CCDC146Q8IYE0 955 aa17.25■□□□□ 0.35
PRKCSH-218ENST00000593053 NPHP1O15259 732 aa17.24■□□□□ 0.35
PRKCSH-218ENST00000593053 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
PRKCSH-218ENST00000593053 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
PRKCSH-218ENST00000593053 C9orf131Q5VYM1 1079 aa17.24■□□□□ 0.35
PRKCSH-218ENST00000593053 CNBD1Q8NA66 436 aa17.24■□□□□ 0.35
PRKCSH-218ENST00000593053 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
PRKCSH-218ENST00000593053 ZNF652Q9Y2D9 606 aa17.24■□□□□ 0.35
PRKCSH-218ENST00000593053 AFDNP55196 1824 aaKnown RBP17.24■□□□□ 0.35
PRKCSH-218ENST00000593053 BRCA1P38398 1863 aaKnown RBP17.23■□□□□ 0.35
PRKCSH-218ENST00000593053 SENP3-EIF4A1A0A087X0R7 540 aa17.23■□□□□ 0.35
PRKCSH-218ENST00000593053 PDE6BP35913 854 aa17.23■□□□□ 0.35
PRKCSH-218ENST00000593053 CLEC4GQ6UXB4 293 aa17.23■□□□□ 0.35
PRKCSH-218ENST00000593053 TTLL6Q8N841 843 aa17.23■□□□□ 0.35
PRKCSH-218ENST00000593053 PRKRIP1Q9H875 184 aaPredicted RBP17.23■□□□□ 0.35
PRKCSH-218ENST00000593053 TSPYL4Q9UJ04 414 aa17.23■□□□□ 0.35
PRKCSH-218ENST00000593053 RRP7AQ9Y3A4 280 aaKnown RBP17.23■□□□□ 0.35
PRKCSH-218ENST00000593053 LMOD3Q0VAK6 560 aa17.22■□□□□ 0.35
PRKCSH-218ENST00000593053 NGEFQ8N5V2 710 aa17.22■□□□□ 0.35
PRKCSH-218ENST00000593053 ST5P78524 1137 aa17.21■□□□□ 0.35
PRKCSH-218ENST00000593053 NEUROD2Q15784 382 aa17.21■□□□□ 0.35
PRKCSH-218ENST00000593053 ZNF622Q969S3 477 aaKnown RBP eCLIP17.21■□□□□ 0.35
PRKCSH-218ENST00000593053 RNF181Q9P0P0 153 aa17.21■□□□□ 0.35
PRKCSH-218ENST00000593053 DLG5Q8TDM6 1919 aa17.21■□□□□ 0.35
PRKCSH-218ENST00000593053 HLFQ16534 295 aa17.2■□□□□ 0.34
PRKCSH-218ENST00000593053 NBPF5PQ86XG9 351 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-218ENST00000593053 RUNDC1Q96C34 613 aa17.2■□□□□ 0.34
PRKCSH-218ENST00000593053 ADAMTS8Q9UP79 889 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms