RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 CCT4P50991 539 aaKnown RBP23.43■■□□□ 1.34
HDAC5-212ENST00000593013 MPRIPQ6WCQ1 1025 aa23.43■■□□□ 1.34
HDAC5-212ENST00000593013 G2E3Q7L622 706 aa23.43■■□□□ 1.34
HDAC5-212ENST00000593013 RPAP2Q8IXW5 612 aaPredicted RBP23.43■■□□□ 1.34
HDAC5-212ENST00000593013 LGR6Q9HBX8 967 aa23.43■■□□□ 1.34
HDAC5-212ENST00000593013 SCN11AQ9UI33 1791 aa23.42■■□□□ 1.34
HDAC5-212ENST00000593013 KDM6AO15550 1401 aaPredicted RBP23.42■■□□□ 1.34
HDAC5-212ENST00000593013 HOXB7P09629 217 aa23.42■■□□□ 1.34
HDAC5-212ENST00000593013 LNPKQ9C0E8 428 aa23.42■■□□□ 1.34
HDAC5-212ENST00000593013 DCTPP1Q9H773 170 aa23.42■■□□□ 1.34
HDAC5-212ENST00000593013 RNMTO43148 476 aaKnown RBP23.41■■□□□ 1.34
HDAC5-212ENST00000593013 HSP90AB1P08238 724 aaKnown RBP23.4■■□□□ 1.34
HDAC5-212ENST00000593013 DCAF5Q96JK2 942 aa23.4■■□□□ 1.34
HDAC5-212ENST00000593013 A0A0G2JS52 829 aa23.39■■□□□ 1.34
HDAC5-212ENST00000593013 FLIIQ13045 1269 aa23.39■■□□□ 1.34
HDAC5-212ENST00000593013 TBC1D32Q96NH3 1257 aa23.39■■□□□ 1.34
HDAC5-212ENST00000593013 UPF2Q9HAU5 1272 aaKnown RBP23.39■■□□□ 1.34
HDAC5-212ENST00000593013 BRWD3Q6RI45 1802 aa23.39■■□□□ 1.34
HDAC5-212ENST00000593013 ANKRD45Q5TZF3 282 aa23.39■■□□□ 1.33
HDAC5-212ENST00000593013 CEP85Q6P2H3 762 aa23.39■■□□□ 1.33
HDAC5-212ENST00000593013 MARCH10Q8NA82 808 aaPredicted RBP23.39■■□□□ 1.33
HDAC5-212ENST00000593013 BMP2KLQ5H9B9 411 aa23.38■■□□□ 1.33
HDAC5-212ENST00000593013 SEPT12Q8IYM1 358 aa23.38■■□□□ 1.33
HDAC5-212ENST00000593013 MEIS3Q99687 375 aa23.38■■□□□ 1.33
HDAC5-212ENST00000593013 CHMP4AQ9BY43 222 aa23.38■■□□□ 1.33
HDAC5-212ENST00000593013 EIF4A1P60842 406 aaKnown RBP23.37■■□□□ 1.33
HDAC5-212ENST00000593013 TOGARAM1Q9Y4F4 1720 aa23.35■■□□□ 1.33
HDAC5-212ENST00000593013 MRC1P22897 1456 aa23.35■■□□□ 1.33
HDAC5-212ENST00000593013 F6X3S4 739 aa23.33■■□□□ 1.33
HDAC5-212ENST00000593013 TEFQ10587 303 aa23.33■■□□□ 1.33
HDAC5-212ENST00000593013 HDGFL1Q5TGJ6 251 aa23.33■■□□□ 1.33
HDAC5-212ENST00000593013 SLC52A2Q9HAB3 445 aa23.33■■□□□ 1.32
HDAC5-212ENST00000593013 HEG1Q9ULI3 1381 aa23.32■■□□□ 1.32
HDAC5-212ENST00000593013 ERVV-2B6SEH9 535 aa23.32■■□□□ 1.32
HDAC5-212ENST00000593013 FKBP5Q13451 457 aaPredicted RBP23.32■■□□□ 1.32
HDAC5-212ENST00000593013 EP400Q96L91 3159 aa23.32■■□□□ 1.32
HDAC5-212ENST00000593013 KAT6BQ8WYB5 2073 aa23.31■■□□□ 1.32
HDAC5-212ENST00000593013 SLC4A10Q6U841 1118 aa23.3■■□□□ 1.32
HDAC5-212ENST00000593013 DAXXQ9UER7 740 aaPredicted RBP23.3■■□□□ 1.32
HDAC5-212ENST00000593013 BTBD11A6QL63 1104 aa23.3■■□□□ 1.32
HDAC5-212ENST00000593013 HMMRO75330 724 aa23.3■■□□□ 1.32
HDAC5-212ENST00000593013 NFATC2IPQ8NCF5 419 aa23.3■■□□□ 1.32
HDAC5-212ENST00000593013 ITGB4P16144 1822 aa23.29■■□□□ 1.32
HDAC5-212ENST00000593013 GNAI3P08754 354 aa23.29■■□□□ 1.32
HDAC5-212ENST00000593013 GNAI2P04899 355 aa23.28■■□□□ 1.32
HDAC5-212ENST00000593013 BCL9O00512 1426 aa23.28■■□□□ 1.32
HDAC5-212ENST00000593013 DOT1LQ8TEK3 1739 aa23.28■■□□□ 1.32
HDAC5-212ENST00000593013 CABP4P57796 275 aa23.28■■□□□ 1.32
HDAC5-212ENST00000593013 NECTIN2Q92692 538 aa23.27■■□□□ 1.32
HDAC5-212ENST00000593013 KCNQ3O43525 872 aa23.26■■□□□ 1.31
HDAC5-212ENST00000593013 BECN1Q14457 450 aa23.26■■□□□ 1.31
HDAC5-212ENST00000593013 PLEKHM2Q8IWE5 1019 aa23.26■■□□□ 1.31
HDAC5-212ENST00000593013 KRT27Q7Z3Y8 459 aa23.25■■□□□ 1.31
HDAC5-212ENST00000593013 SLC4A3P48751 1232 aa23.25■■□□□ 1.31
HDAC5-212ENST00000593013 FAM182BQ5T319 152 aa23.25■■□□□ 1.31
HDAC5-212ENST00000593013 C22orf23Q9BZE7 217 aa23.25■■□□□ 1.31
HDAC5-212ENST00000593013 PRIM1P49642 420 aaKnown RBP23.24■■□□□ 1.31
HDAC5-212ENST00000593013 MFAP1P55081 439 aaKnown RBP23.23■■□□□ 1.31
HDAC5-212ENST00000593013 PIGBQ92521 554 aa23.23■■□□□ 1.31
HDAC5-212ENST00000593013 PHAXQ9H814 394 aaKnown RBP23.23■■□□□ 1.31
HDAC5-212ENST00000593013 TMOD3Q9NYL9 352 aa23.22■■□□□ 1.31
HDAC5-212ENST00000593013 SBF2Q86WG5 1849 aa23.22■■□□□ 1.31
HDAC5-212ENST00000593013 GIGYF1O75420 1035 aaPredicted RBP23.22■■□□□ 1.31
HDAC5-212ENST00000593013 CHPF2Q9P2E5 772 aa23.22■■□□□ 1.31
HDAC5-212ENST00000593013 RBM25P49756 843 aaKnown RBP23.21■■□□□ 1.31
HDAC5-212ENST00000593013 TTC22Q5TAA0 569 aa23.21■■□□□ 1.31
HDAC5-212ENST00000593013 ZNF790Q6PG37 636 aa23.21■■□□□ 1.31
HDAC5-212ENST00000593013 ACSBG1Q96GR2 724 aa23.21■■□□□ 1.31
HDAC5-212ENST00000593013 PAPPAQ13219 1627 aa23.2■■□□□ 1.3
HDAC5-212ENST00000593013 C5P01031 1676 aa23.2■■□□□ 1.3
HDAC5-212ENST00000593013 GSPT1P15170 499 aaKnown RBP23.2■■□□□ 1.3
HDAC5-212ENST00000593013 EIF2S2P20042 333 aaKnown RBP23.2■■□□□ 1.3
HDAC5-212ENST00000593013 ATP8B2P98198 1209 aa23.2■■□□□ 1.3
HDAC5-212ENST00000593013 SLC39A6Q13433 755 aa23.2■■□□□ 1.3
HDAC5-212ENST00000593013 ILDR2Q71H61 639 aa23.2■■□□□ 1.3
HDAC5-212ENST00000593013 USP44Q9H0E7 712 aa23.2■■□□□ 1.3
HDAC5-212ENST00000593013 TUBGCP6Q96RT7 1819 aa23.2■■□□□ 1.3
HDAC5-212ENST00000593013 KCNQ2O43526 872 aa23.19■■□□□ 1.3
HDAC5-212ENST00000593013 NBR1Q14596 966 aa23.19■■□□□ 1.3
HDAC5-212ENST00000593013 DBF4Q9UBU7 674 aaPredicted RBP23.19■■□□□ 1.3
HDAC5-212ENST00000593013 EIF5BO60841 1220 aaKnown RBP23.19■■□□□ 1.3
HDAC5-212ENST00000593013 SYTL4Q96C24 671 aaPredicted RBP23.19■■□□□ 1.3
HDAC5-212ENST00000593013 ADCY9O60503 1353 aa23.18■■□□□ 1.3
HDAC5-212ENST00000593013 CDC45O75419 566 aa23.18■■□□□ 1.3
HDAC5-212ENST00000593013 TBC1D9Q6ZT07 1266 aa23.18■■□□□ 1.3
HDAC5-212ENST00000593013 SRCIN1Q9C0H9 1055 aa23.18■■□□□ 1.3
HDAC5-212ENST00000593013 NHSQ6T4R5 1651 aa23.17■■□□□ 1.3
HDAC5-212ENST00000593013 FAM196AQ6ZSG2 479 aa23.17■■□□□ 1.3
HDAC5-212ENST00000593013 DNAAF4Q8WXU2 420 aa23.17■■□□□ 1.3
HDAC5-212ENST00000593013 UBR2Q8IWV8 1755 aa23.17■■□□□ 1.3
HDAC5-212ENST00000593013 BEND3Q5T5X7 828 aa23.16■■□□□ 1.3
HDAC5-212ENST00000593013 OSBPL3Q9H4L5 887 aa23.16■■□□□ 1.3
HDAC5-212ENST00000593013 ASAP1Q9ULH1 1129 aa23.16■■□□□ 1.3
HDAC5-212ENST00000593013 IBTKQ9P2D0 1353 aaPredicted RBP23.16■■□□□ 1.3
HDAC5-212ENST00000593013 UBTFL1P0CB47 393 aaPredicted RBP23.16■■□□□ 1.3
HDAC5-212ENST00000593013 PTF1AQ7RTS3 328 aa23.16■■□□□ 1.3
HDAC5-212ENST00000593013 C16orf71Q8IYS4 520 aaPredicted RBP23.16■■□□□ 1.3
HDAC5-212ENST00000593013 ATG3Q9NT62 314 aa23.16■■□□□ 1.3
HDAC5-212ENST00000593013 LRRFIP2Q9Y608 721 aaKnown RBP23.16■■□□□ 1.3
HDAC5-212ENST00000593013 KCPQ6ZWJ8 1503 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms