RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 TMPOP42166 694 aaKnown RBP15.57■□□□□ 0.08
DDX39A-219ENST00000592927 RIPK4P57078 832 aa15.57■□□□□ 0.08
DDX39A-219ENST00000592927 SMARCC1Q92922 1105 aaPredicted RBP15.57■□□□□ 0.08
DDX39A-219ENST00000592927 C4BP0C0L5 1744 aa15.57■□□□□ 0.08
DDX39A-219ENST00000592927 ERVV-2B6SEH9 535 aa15.56■□□□□ 0.08
DDX39A-219ENST00000592927 APAF1O14727 1248 aa15.56■□□□□ 0.08
DDX39A-219ENST00000592927 RNMTO43148 476 aaKnown RBP15.56■□□□□ 0.08
DDX39A-219ENST00000592927 HTATSF1O43719 755 aaKnown RBP15.56■□□□□ 0.08
DDX39A-219ENST00000592927 KCNA3P22001 575 aa15.56■□□□□ 0.08
DDX39A-219ENST00000592927 NEUROD2Q15784 382 aa15.56■□□□□ 0.08
DDX39A-219ENST00000592927 LINC00116Q8NCU8 138 aa15.56■□□□□ 0.08
DDX39A-219ENST00000592927 LGR6Q9HBX8 967 aa15.56■□□□□ 0.08
DDX39A-219ENST00000592927 MKRN1Q9UHC7 482 aaKnown RBP15.56■□□□□ 0.08
DDX39A-219ENST00000592927 RRP7AQ9Y3A4 280 aaKnown RBP15.56■□□□□ 0.08
DDX39A-219ENST00000592927 TOGARAM1Q9Y4F4 1720 aa15.55■□□□□ 0.08
DDX39A-219ENST00000592927 KDM6AO15550 1401 aaPredicted RBP15.55■□□□□ 0.08
DDX39A-219ENST00000592927 GNPATO15228 680 aa15.55■□□□□ 0.08
DDX39A-219ENST00000592927 VEGFAP15692 232 aaPredicted RBP15.55■□□□□ 0.08
DDX39A-219ENST00000592927 CABP4P57796 275 aa15.55■□□□□ 0.08
DDX39A-219ENST00000592927 LMOD3Q0VAK6 560 aa15.55■□□□□ 0.08
DDX39A-219ENST00000592927 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
DDX39A-219ENST00000592927 CCDC87Q9NVE4 849 aa15.55■□□□□ 0.08
DDX39A-219ENST00000592927 MLLT1Q03111 559 aaPredicted RBP15.54■□□□□ 0.08
DDX39A-219ENST00000592927 IL17REQ8NFR9 667 aa15.54■□□□□ 0.08
DDX39A-219ENST00000592927 ABHD8Q96I13 439 aa15.54■□□□□ 0.08
DDX39A-219ENST00000592927 TMOD3Q9NYL9 352 aa15.54■□□□□ 0.08
DDX39A-219ENST00000592927 PIM2Q9P1W9 311 aa15.54■□□□□ 0.08
DDX39A-219ENST00000592927 N4BP2Q86UW6 1770 aaPredicted RBP15.54■□□□□ 0.08
DDX39A-219ENST00000592927 KIAA1551Q9HCM1 1747 aa15.54■□□□□ 0.08
DDX39A-219ENST00000592927 CTCFP49711 727 aaPredicted RBP15.53■□□□□ 0.08
DDX39A-219ENST00000592927 MCM10Q7L590 875 aa15.53■□□□□ 0.08
DDX39A-219ENST00000592927 NLGN1Q8N2Q7 840 aa15.53■□□□□ 0.08
DDX39A-219ENST00000592927 TEFQ10587 303 aa15.52■□□□□ 0.08
DDX39A-219ENST00000592927 DCTN1Q14203 1278 aa15.52■□□□□ 0.08
DDX39A-219ENST00000592927 DALRD3Q5D0E6 543 aaKnown RBP15.52■□□□□ 0.08
DDX39A-219ENST00000592927 NFATC2IPQ8NCF5 419 aa15.52■□□□□ 0.08
DDX39A-219ENST00000592927 PIGBQ92521 554 aa15.52■□□□□ 0.08
DDX39A-219ENST00000592927 SLC52A2Q9HAB3 445 aa15.52■□□□□ 0.08
DDX39A-219ENST00000592927 TAF1LQ8IZX4 1826 aa15.52■□□□□ 0.07
DDX39A-219ENST00000592927 LOC102724428A0A0B4J2F2 783 aa15.51■□□□□ 0.07
DDX39A-219ENST00000592927 SIK1P57059 783 aa15.51■□□□□ 0.07
DDX39A-219ENST00000592927 UBR3Q6ZT12 1888 aa15.5■□□□□ 0.07
DDX39A-219ENST00000592927 CEMIPQ8WUJ3 1361 aa15.5■□□□□ 0.07
DDX39A-219ENST00000592927 GLTPD2A6NH11 291 aa15.5■□□□□ 0.07
DDX39A-219ENST00000592927 ITPK1Q13572 414 aa15.5■□□□□ 0.07
DDX39A-219ENST00000592927 AIDAQ96BJ3 306 aa15.5■□□□□ 0.07
DDX39A-219ENST00000592927 CREBZFQ9NS37 354 aa15.5■□□□□ 0.07
DDX39A-219ENST00000592927 TRIM35Q9UPQ4 493 aa15.5■□□□□ 0.07
DDX39A-219ENST00000592927 PARP3Q9Y6F1 533 aa15.5■□□□□ 0.07
DDX39A-219ENST00000592927 TNRC6CQ9HCJ0 1690 aaKnown RBP15.5■□□□□ 0.07
DDX39A-219ENST00000592927 LBX1P52954 281 aa15.49■□□□□ 0.07
DDX39A-219ENST00000592927 TRAPPC3LQ5T215 181 aa15.49■□□□□ 0.07
DDX39A-219ENST00000592927 THUMPD2Q9BTF0 503 aaKnown RBP15.49■□□□□ 0.07
DDX39A-219ENST00000592927 KIF13BQ9NQT8 1826 aa15.48■□□□□ 0.07
DDX39A-219ENST00000592927 SALL2Q9Y467 1007 aaPredicted RBP15.48■□□□□ 0.07
DDX39A-219ENST00000592927 ADAMTS7Q9UKP4 1686 aa15.48■□□□□ 0.07
DDX39A-219ENST00000592927 SCN11AQ9UI33 1791 aa15.47■□□□□ 0.07
DDX39A-219ENST00000592927 ATP6V1AP38606 617 aa15.47■□□□□ 0.07
DDX39A-219ENST00000592927 RASSF7Q02833 373 aa15.47■□□□□ 0.07
DDX39A-219ENST00000592927 CCDC27Q2M243 656 aa15.47■□□□□ 0.07
DDX39A-219ENST00000592927 MRC1P22897 1456 aa15.46■□□□□ 0.07
DDX39A-219ENST00000592927 ZC3H4Q9UPT8 1303 aaKnown RBP15.46■□□□□ 0.07
DDX39A-219ENST00000592927 CCDC85CA6NKD9 419 aa15.46■□□□□ 0.07
DDX39A-219ENST00000592927 BTBD11A6QL63 1104 aa15.46■□□□□ 0.07
DDX39A-219ENST00000592927 RGS19P49795 217 aa15.46■□□□□ 0.07
DDX39A-219ENST00000592927 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
DDX39A-219ENST00000592927 TAF7Q15545 349 aaPredicted RBP15.46■□□□□ 0.07
DDX39A-219ENST00000592927 ATG3Q9NT62 314 aa15.46■□□□□ 0.07
DDX39A-219ENST00000592927 ASAP1Q9ULH1 1129 aa15.46■□□□□ 0.07
DDX39A-219ENST00000592927 RTCBQ9Y3I0 505 aaKnown RBP15.46■□□□□ 0.07
DDX39A-219ENST00000592927 DLG5Q8TDM6 1919 aa15.45■□□□□ 0.06
DDX39A-219ENST00000592927 POTECB2RU33 542 aa15.45■□□□□ 0.06
DDX39A-219ENST00000592927 GYS1P13807 737 aa15.45■□□□□ 0.06
DDX39A-219ENST00000592927 CHRNA5P30532 468 aa15.45■□□□□ 0.06
DDX39A-219ENST00000592927 ARHGEF1Q92888 912 aaKnown RBP15.45■□□□□ 0.06
DDX39A-219ENST00000592927 ITGB4P16144 1822 aa15.45■□□□□ 0.06
DDX39A-219ENST00000592927 ZNF521Q96K83 1311 aa15.44■□□□□ 0.06
DDX39A-219ENST00000592927 SLC39A6Q13433 755 aa15.44■□□□□ 0.06
DDX39A-219ENST00000592927 WWC1Q8IX03 1113 aa15.44■□□□□ 0.06
DDX39A-219ENST00000592927 TTC5Q8N0Z6 440 aa15.44■□□□□ 0.06
DDX39A-219ENST00000592927 WBP1LQ9NX94 342 aa15.44■□□□□ 0.06
DDX39A-219ENST00000592927 CNTNAP1P78357 1384 aa15.44■□□□□ 0.06
DDX39A-219ENST00000592927 LMNB1P20700 586 aa15.43■□□□□ 0.06
DDX39A-219ENST00000592927 VEGFBP49765 207 aa15.43■□□□□ 0.06
DDX39A-219ENST00000592927 ZNF790Q6PG37 636 aa15.43■□□□□ 0.06
DDX39A-219ENST00000592927 LAS1LQ9Y4W2 734 aaKnown RBP15.43■□□□□ 0.06
DDX39A-219ENST00000592927 RFC4P35249 363 aa15.42■□□□□ 0.06
DDX39A-219ENST00000592927 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
DDX39A-219ENST00000592927 RBM42Q9BTD8 480 aaKnown RBP15.42■□□□□ 0.06
DDX39A-219ENST00000592927 BABAM1Q9NWV8 329 aa15.42■□□□□ 0.06
DDX39A-219ENST00000592927 MIS18AQ9NYP9 233 aa15.42■□□□□ 0.06
DDX39A-219ENST00000592927 TSPYL4Q9UJ04 414 aa15.42■□□□□ 0.06
DDX39A-219ENST00000592927 PTCD1O75127 700 aaKnown RBP15.41■□□□□ 0.06
DDX39A-219ENST00000592927 HSPA8P11142 646 aaKnown RBP15.41■□□□□ 0.06
DDX39A-219ENST00000592927 GOLGA2Q08379 1002 aa15.41■□□□□ 0.06
DDX39A-219ENST00000592927 ARFGEF1Q9Y6D6 1849 aa15.4■□□□□ 0.06
DDX39A-219ENST00000592927 C4AP0C0L4 1744 aa15.4■□□□□ 0.06
DDX39A-219ENST00000592927 BRCA1P38398 1863 aaKnown RBP15.4■□□□□ 0.06
DDX39A-219ENST00000592927 WDR63Q8IWG1 891 aa15.4■□□□□ 0.06
DDX39A-219ENST00000592927 CFAP44Q96MT7 982 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms