RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 KDM3BQ7LBC6 1761 aa19.82■□□□□ 0.76
SF3A2-207ENST00000592839 TGFB2P61812 414 aa19.81■□□□□ 0.76
SF3A2-207ENST00000592839 ZBTB1Q9Y2K1 713 aa19.81■□□□□ 0.76
SF3A2-207ENST00000592839 EIF5P55010 431 aaKnown RBP19.8■□□□□ 0.76
SF3A2-207ENST00000592839 C1QTNF8P60827 252 aa19.8■□□□□ 0.76
SF3A2-207ENST00000592839 FMNL2Q96PY5 1086 aa19.8■□□□□ 0.76
SF3A2-207ENST00000592839 NARFQ9UHQ1 456 aa19.8■□□□□ 0.76
SF3A2-207ENST00000592839 STARD3NLO95772 234 aa19.79■□□□□ 0.76
SF3A2-207ENST00000592839 TM4SF1P30408 202 aa19.79■□□□□ 0.76
SF3A2-207ENST00000592839 LAMB4A4D0S4 1761 aa19.79■□□□□ 0.76
SF3A2-207ENST00000592839 BCORQ6W2J9 1755 aa19.79■□□□□ 0.76
SF3A2-207ENST00000592839 ARFGEF1Q9Y6D6 1849 aa19.79■□□□□ 0.76
SF3A2-207ENST00000592839 MYBBP1AQ9BQG0 1328 aaKnown RBP19.78■□□□□ 0.76
SF3A2-207ENST00000592839 PNNQ9H307 717 aaKnown RBP19.78■□□□□ 0.76
SF3A2-207ENST00000592839 AFDNP55196 1824 aaKnown RBP19.78■□□□□ 0.76
SF3A2-207ENST00000592839 IL6STP40189 918 aaPredicted RBP19.77■□□□□ 0.76
SF3A2-207ENST00000592839 FKBP8Q14318 412 aa19.77■□□□□ 0.76
SF3A2-207ENST00000592839 RTF1Q92541 710 aaKnown RBP19.77■□□□□ 0.76
SF3A2-207ENST00000592839 N4BP2Q86UW6 1770 aaPredicted RBP19.77■□□□□ 0.76
SF3A2-207ENST00000592839 DLEC1Q9Y238 1755 aa19.76■□□□□ 0.75
SF3A2-207ENST00000592839 ADCY9O60503 1353 aa19.76■□□□□ 0.75
SF3A2-207ENST00000592839 BTBD11A6QL63 1104 aa19.76■□□□□ 0.75
SF3A2-207ENST00000592839 RGL2O15211 777 aa19.76■□□□□ 0.75
SF3A2-207ENST00000592839 DDR1Q08345 913 aa19.76■□□□□ 0.75
SF3A2-207ENST00000592839 BCL2L12Q9HB09 334 aa19.76■□□□□ 0.75
SF3A2-207ENST00000592839 SRP68Q9UHB9 627 aaKnown RBP19.76■□□□□ 0.75
SF3A2-207ENST00000592839 POLRMTO00411 1230 aaKnown RBP19.75■□□□□ 0.75
SF3A2-207ENST00000592839 PARP3Q9Y6F1 533 aa19.75■□□□□ 0.75
SF3A2-207ENST00000592839 A0A087WZG4 1122 aa19.74■□□□□ 0.75
SF3A2-207ENST00000592839 SENP3-EIF4A1A0A087X0R7 540 aa19.74■□□□□ 0.75
SF3A2-207ENST00000592839 GIGYF1O75420 1035 aaPredicted RBP19.74■□□□□ 0.75
SF3A2-207ENST00000592839 DDX10Q13206 875 aaKnown RBP19.74■□□□□ 0.75
SF3A2-207ENST00000592839 NFE2L2Q16236 605 aa19.74■□□□□ 0.75
SF3A2-207ENST00000592839 MCM10Q7L590 875 aa19.74■□□□□ 0.75
SF3A2-207ENST00000592839 ZPR1O75312 459 aa19.73■□□□□ 0.75
SF3A2-207ENST00000592839 KCNQ3O43525 872 aa19.72■□□□□ 0.75
SF3A2-207ENST00000592839 NEFMP07197 916 aa19.72■□□□□ 0.75
SF3A2-207ENST00000592839 TAF7Q15545 349 aaPredicted RBP19.72■□□□□ 0.75
SF3A2-207ENST00000592839 USPL1Q5W0Q7 1092 aa19.72■□□□□ 0.75
SF3A2-207ENST00000592839 SNRPA1P09661 255 aaKnown RBP19.71■□□□□ 0.75
SF3A2-207ENST00000592839 ZEB1P37275 1124 aaPredicted RBP19.71■□□□□ 0.75
SF3A2-207ENST00000592839 PNISRQ8TF01 805 aaKnown RBP19.71■□□□□ 0.75
SF3A2-207ENST00000592839 KCNA3P22001 575 aa19.7■□□□□ 0.74
SF3A2-207ENST00000592839 NFIXQ14938 502 aa19.7■□□□□ 0.74
SF3A2-207ENST00000592839 PRKRIP1Q9H875 184 aaPredicted RBP19.7■□□□□ 0.74
SF3A2-207ENST00000592839 DCTN1Q14203 1278 aa19.69■□□□□ 0.74
SF3A2-207ENST00000592839 BABAM1Q9NWV8 329 aa19.69■□□□□ 0.74
SF3A2-207ENST00000592839 CANXP27824 592 aaKnown RBP19.68■□□□□ 0.74
SF3A2-207ENST00000592839 ANKRD31Q8N7Z5 1873 aa19.67■□□□□ 0.74
SF3A2-207ENST00000592839 USP16Q9Y5T5 823 aa19.67■□□□□ 0.74
SF3A2-207ENST00000592839 MAPK8IP3Q9UPT6 1336 aa19.67■□□□□ 0.74
SF3A2-207ENST00000592839 CAMTA2O94983 1202 aa19.66■□□□□ 0.74
SF3A2-207ENST00000592839 DPEP1P16444 411 aa19.66■□□□□ 0.74
SF3A2-207ENST00000592839 A1BGP04217 495 aa19.65■□□□□ 0.74
SF3A2-207ENST00000592839 CLEC4GQ6UXB4 293 aa19.65■□□□□ 0.74
SF3A2-207ENST00000592839 CARMIL3Q8ND23 1372 aa19.65■□□□□ 0.74
SF3A2-207ENST00000592839 A0A0G2JLW4 131 aa19.64■□□□□ 0.73
SF3A2-207ENST00000592839 ERBB4Q15303 1308 aa19.63■□□□□ 0.73
SF3A2-207ENST00000592839 PRAMEF22A3QJZ6 481 aa19.63■□□□□ 0.73
SF3A2-207ENST00000592839 SERPINB2P05120 415 aa19.63■□□□□ 0.73
SF3A2-207ENST00000592839 TMPOP42166 694 aaKnown RBP19.63■□□□□ 0.73
SF3A2-207ENST00000592839 EIF4A1P60842 406 aaKnown RBP19.63■□□□□ 0.73
SF3A2-207ENST00000592839 LMOD3Q0VAK6 560 aa19.63■□□□□ 0.73
SF3A2-207ENST00000592839 PIM2Q9P1W9 311 aa19.63■□□□□ 0.73
SF3A2-207ENST00000592839 PDZRN3Q9UPQ7 1066 aa19.63■□□□□ 0.73
SF3A2-207ENST00000592839 ATP10DQ9P241 1426 aa19.62■□□□□ 0.73
SF3A2-207ENST00000592839 NBPF26B4DH59 902 aa19.62■□□□□ 0.73
SF3A2-207ENST00000592839 NBPF10Q6P3W6 841 aaKnown RBP19.62■□□□□ 0.73
SF3A2-207ENST00000592839 NBPF15Q8N660 670 aa19.62■□□□□ 0.73
SF3A2-207ENST00000592839 GPBP1L1Q9HC44 474 aaPredicted RBP19.62■□□□□ 0.73
SF3A2-207ENST00000592839 TBC1D9BQ66K14 1250 aa19.61■□□□□ 0.73
SF3A2-207ENST00000592839 ARFGEF2Q9Y6D5 1785 aa19.61■□□□□ 0.73
SF3A2-207ENST00000592839 COL11A2P13942 1736 aaPredicted RBP19.61■□□□□ 0.73
SF3A2-207ENST00000592839 DZIP3Q86Y13 1208 aaKnown RBP19.6■□□□□ 0.73
SF3A2-207ENST00000592839 SBF1O95248 1867 aa19.59■□□□□ 0.73
SF3A2-207ENST00000592839 RUNDC1Q96C34 613 aa19.59■□□□□ 0.73
SF3A2-207ENST00000592839 WWC3Q9ULE0 1092 aa19.59■□□□□ 0.73
SF3A2-207ENST00000592839 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
SF3A2-207ENST00000592839 RIPK4P57078 832 aa19.58■□□□□ 0.72
SF3A2-207ENST00000592839 DALRD3Q5D0E6 543 aaKnown RBP19.58■□□□□ 0.72
SF3A2-207ENST00000592839 BRIP1Q9BX63 1249 aa19.58■□□□□ 0.72
SF3A2-207ENST00000592839 BCS1LQ9Y276 419 aa19.58■□□□□ 0.72
SF3A2-207ENST00000592839 PRR5LQ6MZQ0 368 aa19.57■□□□□ 0.72
SF3A2-207ENST00000592839 THUMPD2Q9BTF0 503 aaKnown RBP19.57■□□□□ 0.72
SF3A2-207ENST00000592839 MIS18AQ9NYP9 233 aa19.57■□□□□ 0.72
SF3A2-207ENST00000592839 ZNF652Q9Y2D9 606 aa19.57■□□□□ 0.72
SF3A2-207ENST00000592839 NUP98P52948 1817 aa19.57■□□□□ 0.72
SF3A2-207ENST00000592839 CEP350Q5VT06 3117 aa19.57■□□□□ 0.72
SF3A2-207ENST00000592839 IBTKQ9P2D0 1353 aaPredicted RBP19.57■□□□□ 0.72
SF3A2-207ENST00000592839 LRP10Q7Z4F1 713 aa19.56■□□□□ 0.72
SF3A2-207ENST00000592839 NPM2Q86SE8 214 aaKnown RBP19.56■□□□□ 0.72
SF3A2-207ENST00000592839 ADAMTS8Q9UP79 889 aa19.56■□□□□ 0.72
SF3A2-207ENST00000592839 TRIM35Q9UPQ4 493 aa19.56■□□□□ 0.72
SF3A2-207ENST00000592839 RIC1Q4ADV7 1423 aa19.56■□□□□ 0.72
SF3A2-207ENST00000592839 KLRG2A4D1S0 409 aaPredicted RBP19.55■□□□□ 0.72
SF3A2-207ENST00000592839 ERVV-1B6SEH8 477 aa19.55■□□□□ 0.72
SF3A2-207ENST00000592839 CHRNA5P30532 468 aa19.55■□□□□ 0.72
SF3A2-207ENST00000592839 ZNF526Q8TF50 670 aaPredicted RBP19.55■□□□□ 0.72
SF3A2-207ENST00000592839 CHL1O00533 1208 aa19.54■□□□□ 0.72
SF3A2-207ENST00000592839 WDR43Q15061 677 aaKnown RBP eCLIP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms