RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-215ENST00000592776 FCHSD2O94868 740 aa29.39■■■□□ 2.3
PTPN2-215ENST00000592776 ZPR1O75312 459 aa29.38■■■□□ 2.29
PTPN2-215ENST00000592776 DPEP1P16444 411 aa29.38■■■□□ 2.29
PTPN2-215ENST00000592776 TGFB2P61812 414 aa29.38■■■□□ 2.29
PTPN2-215ENST00000592776 MCM10Q7L590 875 aa29.38■■■□□ 2.29
PTPN2-215ENST00000592776 COL15A1P39059 1388 aa29.38■■■□□ 2.29
PTPN2-215ENST00000592776 HEG1Q9ULI3 1381 aa29.38■■■□□ 2.29
PTPN2-215ENST00000592776 TM4SF1P30408 202 aa29.37■■■□□ 2.29
PTPN2-215ENST00000592776 DCTN1Q14203 1278 aa29.37■■■□□ 2.29
PTPN2-215ENST00000592776 NARFQ9UHQ1 456 aa29.36■■■□□ 2.29
PTPN2-215ENST00000592776 BTBD11A6QL63 1104 aa29.35■■■□□ 2.29
PTPN2-215ENST00000592776 BCL2L12Q9HB09 334 aa29.35■■■□□ 2.29
PTPN2-215ENST00000592776 POLRMTO00411 1230 aaKnown RBP29.34■■■□□ 2.29
PTPN2-215ENST00000592776 STARD3NLO95772 234 aa29.34■■■□□ 2.29
PTPN2-215ENST00000592776 BCS1LQ9Y276 419 aa29.34■■■□□ 2.29
PTPN2-215ENST00000592776 KCNA3P22001 575 aa29.33■■■□□ 2.29
PTPN2-215ENST00000592776 NFIXQ14938 502 aa29.32■■■□□ 2.28
PTPN2-215ENST00000592776 FMNL2Q96PY5 1086 aa29.32■■■□□ 2.28
PTPN2-215ENST00000592776 EIF5P55010 431 aaKnown RBP29.31■■■□□ 2.28
PTPN2-215ENST00000592776 RTF1Q92541 710 aaKnown RBP29.31■■■□□ 2.28
PTPN2-215ENST00000592776 A1BGP04217 495 aa29.3■■■□□ 2.28
PTPN2-215ENST00000592776 ATP10DQ9P241 1426 aa29.29■■■□□ 2.28
PTPN2-215ENST00000592776 PRAMEF22A3QJZ6 481 aa29.29■■■□□ 2.28
PTPN2-215ENST00000592776 CHRNA5P30532 468 aa29.29■■■□□ 2.28
PTPN2-215ENST00000592776 DDX10Q13206 875 aaKnown RBP29.29■■■□□ 2.28
PTPN2-215ENST00000592776 ZNF330Q9Y3S2 320 aaPredicted RBP29.29■■■□□ 2.28
PTPN2-215ENST00000592776 TEX13AQ9BXU3 409 aaPredicted RBP29.28■■■□□ 2.28
PTPN2-215ENST00000592776 USP16Q9Y5T5 823 aa29.27■■■□□ 2.28
PTPN2-215ENST00000592776 PIP4K2AP48426 406 aaPredicted RBP29.26■■■□□ 2.27
PTPN2-215ENST00000592776 BICDL1Q6ZP65 573 aa29.26■■■□□ 2.27
PTPN2-215ENST00000592776 TBC1D2BQ9UPU7 963 aa29.26■■■□□ 2.27
PTPN2-215ENST00000592776 C1QTNF8P60827 252 aa29.25■■■□□ 2.27
PTPN2-215ENST00000592776 ZNF526Q8TF50 670 aaPredicted RBP29.25■■■□□ 2.27
PTPN2-215ENST00000592776 PLEKHF1Q96S99 279 aa29.25■■■□□ 2.27
PTPN2-215ENST00000592776 MIS18AQ9NYP9 233 aa29.25■■■□□ 2.27
PTPN2-215ENST00000592776 ARHGAP27Q6ZUM4 889 aa29.24■■■□□ 2.27
PTPN2-215ENST00000592776 ADCY9O60503 1353 aa29.24■■■□□ 2.27
PTPN2-215ENST00000592776 HTATSF1O43719 755 aaKnown RBP29.23■■■□□ 2.27
PTPN2-215ENST00000592776 GIGYF1O75420 1035 aaPredicted RBP29.23■■■□□ 2.27
PTPN2-215ENST00000592776 SERPINB2P05120 415 aa29.23■■■□□ 2.27
PTPN2-215ENST00000592776 BRCA1P38398 1863 aaKnown RBP29.23■■■□□ 2.27
PTPN2-215ENST00000592776 AFDNP55196 1824 aaKnown RBP29.22■■■□□ 2.27
PTPN2-215ENST00000592776 A0A087WZG4 1122 aa29.22■■■□□ 2.27
PTPN2-215ENST00000592776 IL6STP40189 918 aaPredicted RBP29.22■■■□□ 2.27
PTPN2-215ENST00000592776 PIM2Q9P1W9 311 aa29.22■■■□□ 2.27
PTPN2-215ENST00000592776 TBC1D9BQ66K14 1250 aa29.21■■■□□ 2.27
PTPN2-215ENST00000592776 TAF7Q15545 349 aaPredicted RBP29.2■■■□□ 2.26
PTPN2-215ENST00000592776 THUMPD2Q9BTF0 503 aaKnown RBP29.2■■■□□ 2.26
PTPN2-215ENST00000592776 NEFMP07197 916 aa29.18■■■□□ 2.26
PTPN2-215ENST00000592776 SNRPA1P09661 255 aaKnown RBP29.18■■■□□ 2.26
PTPN2-215ENST00000592776 RALBP1Q15311 655 aa29.18■■■□□ 2.26
PTPN2-215ENST00000592776 DLG5Q8TDM6 1919 aa29.18■■■□□ 2.26
PTPN2-215ENST00000592776 NRXN2Q9P2S2 1712 aa29.17■■■□□ 2.26
PTPN2-215ENST00000592776 CARMIL3Q8ND23 1372 aa29.17■■■□□ 2.26
PTPN2-215ENST00000592776 NFE2L2Q16236 605 aa29.17■■■□□ 2.26
PTPN2-215ENST00000592776 DALRD3Q5D0E6 543 aaKnown RBP29.17■■■□□ 2.26
PTPN2-215ENST00000592776 CCDC24Q8N4L8 307 aa29.17■■■□□ 2.26
PTPN2-215ENST00000592776 GPBP1L1Q9HC44 474 aaPredicted RBP29.17■■■□□ 2.26
PTPN2-215ENST00000592776 CAMTA2O94983 1202 aa29.16■■■□□ 2.26
PTPN2-215ENST00000592776 DZIP3Q86Y13 1208 aaKnown RBP29.14■■■□□ 2.26
PTPN2-215ENST00000592776 SCN7AQ01118 1682 aa29.14■■■□□ 2.26
PTPN2-215ENST00000592776 NBPF26B4DH59 902 aa29.13■■■□□ 2.25
PTPN2-215ENST00000592776 NBPF10Q6P3W6 841 aaKnown RBP29.13■■■□□ 2.25
PTPN2-215ENST00000592776 NPM2Q86SE8 214 aaKnown RBP29.13■■■□□ 2.25
PTPN2-215ENST00000592776 NBPF15Q8N660 670 aa29.13■■■□□ 2.25
PTPN2-215ENST00000592776 ARFGEF1Q9Y6D6 1849 aa29.12■■■□□ 2.25
PTPN2-215ENST00000592776 MAPK8IP3Q9UPT6 1336 aa29.12■■■□□ 2.25
PTPN2-215ENST00000592776 SENP3-EIF4A1A0A087X0R7 540 aa29.11■■■□□ 2.25
PTPN2-215ENST00000592776 C2CD5Q86YS7 1000 aa29.11■■■□□ 2.25
PTPN2-215ENST00000592776 PRR5LQ6MZQ0 368 aa29.09■■■□□ 2.25
PTPN2-215ENST00000592776 C9orf131Q5VYM1 1079 aa29.08■■■□□ 2.25
PTPN2-215ENST00000592776 PNNQ9H307 717 aaKnown RBP29.08■■■□□ 2.25
PTPN2-215ENST00000592776 SETDB2Q96T68 719 aa29.07■■■□□ 2.24
PTPN2-215ENST00000592776 MYBBP1AQ9BQG0 1328 aaKnown RBP29.07■■■□□ 2.24
PTPN2-215ENST00000592776 EIF4A1P60842 406 aaKnown RBP29.06■■■□□ 2.24
PTPN2-215ENST00000592776 BCORQ6W2J9 1755 aa29.06■■■□□ 2.24
PTPN2-215ENST00000592776 H0YIN7 160 aa29.05■■■□□ 2.24
PTPN2-215ENST00000592776 RIPK4P57078 832 aa29.05■■■□□ 2.24
PTPN2-215ENST00000592776 CCDC146Q8IYE0 955 aa29.05■■■□□ 2.24
PTPN2-215ENST00000592776 PNISRQ8TF01 805 aaKnown RBP29.05■■■□□ 2.24
PTPN2-215ENST00000592776 ANKRD31Q8N7Z5 1873 aa29.05■■■□□ 2.24
PTPN2-215ENST00000592776 KDM3BQ7LBC6 1761 aa29.05■■■□□ 2.24
PTPN2-215ENST00000592776 RASSF7Q02833 373 aa29.04■■■□□ 2.24
PTPN2-215ENST00000592776 KIF3CO14782 793 aa29.03■■■□□ 2.24
PTPN2-215ENST00000592776 NGEFQ8N5V2 710 aa29.03■■■□□ 2.24
PTPN2-215ENST00000592776 TTLL6Q8N841 843 aa29.03■■■□□ 2.24
PTPN2-215ENST00000592776 RRP7AQ9Y3A4 280 aaKnown RBP29.03■■■□□ 2.24
PTPN2-215ENST00000592776 BRIP1Q9BX63 1249 aa29.02■■■□□ 2.24
PTPN2-215ENST00000592776 DLEC1Q9Y238 1755 aa29.01■■■□□ 2.23
PTPN2-215ENST00000592776 TMPOP42166 694 aaKnown RBP29.01■■■□□ 2.23
PTPN2-215ENST00000592776 CNBD1Q8NA66 436 aa29.01■■■□□ 2.23
PTPN2-215ENST00000592776 ZNF622Q969S3 477 aaKnown RBP eCLIP29.01■■■□□ 2.23
PTPN2-215ENST00000592776 RNF181Q9P0P0 153 aa29.01■■■□□ 2.23
PTPN2-215ENST00000592776 HLFQ16534 295 aa29■■■□□ 2.23
PTPN2-215ENST00000592776 NPHP1O15259 732 aa28.99■■■□□ 2.23
PTPN2-215ENST00000592776 PDE6BP35913 854 aa28.99■■■□□ 2.23
PTPN2-215ENST00000592776 PRELPP51888 382 aa28.99■■■□□ 2.23
PTPN2-215ENST00000592776 ZNF219Q9P2Y4 722 aaPredicted RBP28.99■■■□□ 2.23
PTPN2-215ENST00000592776 LAMB4A4D0S4 1761 aa28.98■■■□□ 2.23
PTPN2-215ENST00000592776 FAM177BA6PVY3 158 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms