RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 CYP27B1O15528 508 aa17.62■□□□□ 0.41
RANBP3-229ENST00000592771 PLEKHM2Q8IWE5 1019 aa17.62■□□□□ 0.41
RANBP3-229ENST00000592771 USP44Q9H0E7 712 aa17.62■□□□□ 0.41
RANBP3-229ENST00000592771 PRDM11Q9NQV5 511 aa17.62■□□□□ 0.41
RANBP3-229ENST00000592771 ADCY9O60503 1353 aa17.61■□□□□ 0.41
RANBP3-229ENST00000592771 FSD2A1L4K1 749 aa17.61■□□□□ 0.41
RANBP3-229ENST00000592771 DCAF5Q96JK2 942 aa17.61■□□□□ 0.41
RANBP3-229ENST00000592771 C5P01031 1676 aa17.61■□□□□ 0.41
RANBP3-229ENST00000592771 ATP8B2P98198 1209 aa17.6■□□□□ 0.41
RANBP3-229ENST00000592771 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
RANBP3-229ENST00000592771 DNAAF4Q8WXU2 420 aa17.6■□□□□ 0.41
RANBP3-229ENST00000592771 SRCIN1Q9C0H9 1055 aa17.6■□□□□ 0.41
RANBP3-229ENST00000592771 GOLGA6L3A6NEY3 463 aa17.6■□□□□ 0.41
RANBP3-229ENST00000592771 HSP90AB1P08238 724 aaKnown RBP17.6■□□□□ 0.41
RANBP3-229ENST00000592771 BEND3Q5T5X7 828 aa17.6■□□□□ 0.41
RANBP3-229ENST00000592771 PI4KAP2A4QPH2 592 aa17.59■□□□□ 0.41
RANBP3-229ENST00000592771 PI4KAP1Q8N8J0 262 aa17.59■□□□□ 0.41
RANBP3-229ENST00000592771 PRAMEF22A3QJZ6 481 aa17.58■□□□□ 0.4
RANBP3-229ENST00000592771 TRAK2O60296 914 aa17.58■□□□□ 0.4
RANBP3-229ENST00000592771 UBTFL1P0CB47 393 aaPredicted RBP17.58■□□□□ 0.4
RANBP3-229ENST00000592771 HYPKQ9NX55 129 aa17.58■□□□□ 0.4
RANBP3-229ENST00000592771 ANXA1P04083 346 aa17.57■□□□□ 0.4
RANBP3-229ENST00000592771 GSPT1P15170 499 aaKnown RBP17.57■□□□□ 0.4
RANBP3-229ENST00000592771 PROSER3Q2NL68 480 aa17.57■□□□□ 0.4
RANBP3-229ENST00000592771 NFATC2IPQ8NCF5 419 aa17.57■□□□□ 0.4
RANBP3-229ENST00000592771 DDX21Q9NR30 783 aaKnown RBP eCLIP17.57■□□□□ 0.4
RANBP3-229ENST00000592771 LRRFIP2Q9Y608 721 aaKnown RBP17.57■□□□□ 0.4
RANBP3-229ENST00000592771 GLI3P10071 1580 aa17.57■□□□□ 0.4
RANBP3-229ENST00000592771 PNMA6EA0A0J9YXQ4 647 aa17.57■□□□□ 0.4
RANBP3-229ENST00000592771 CDC45O75419 566 aa17.57■□□□□ 0.4
RANBP3-229ENST00000592771 PDIA6Q15084 440 aa17.57■□□□□ 0.4
RANBP3-229ENST00000592771 TTC22Q5TAA0 569 aa17.57■□□□□ 0.4
RANBP3-229ENST00000592771 C16orf71Q8IYS4 520 aaPredicted RBP17.57■□□□□ 0.4
RANBP3-229ENST00000592771 CARD10Q9BWT7 1032 aa17.57■□□□□ 0.4
RANBP3-229ENST00000592771 SHANK3Q9BYB0 1731 aa17.57■□□□□ 0.4
RANBP3-229ENST00000592771 IBTKQ9P2D0 1353 aaPredicted RBP17.56■□□□□ 0.4
RANBP3-229ENST00000592771 SLC39A6Q13433 755 aa17.56■□□□□ 0.4
RANBP3-229ENST00000592771 SKOR2Q2VWA4 1001 aaPredicted RBP17.56■□□□□ 0.4
RANBP3-229ENST00000592771 GBP4Q96PP9 640 aa17.56■□□□□ 0.4
RANBP3-229ENST00000592771 SMARCA5O60264 1052 aaPredicted RBP17.55■□□□□ 0.4
RANBP3-229ENST00000592771 KSR2Q6VAB6 950 aa17.55■□□□□ 0.4
RANBP3-229ENST00000592771 TBC1D9Q6ZT07 1266 aa17.55■□□□□ 0.4
RANBP3-229ENST00000592771 SPRYD3Q8NCJ5 442 aa17.55■□□□□ 0.4
RANBP3-229ENST00000592771 OTUD7AQ8TE49 926 aaPredicted RBP17.55■□□□□ 0.4
RANBP3-229ENST00000592771 SSH3Q8TE77 659 aa17.55■□□□□ 0.4
RANBP3-229ENST00000592771 ALDH1L1O75891 902 aa17.55■□□□□ 0.4
RANBP3-229ENST00000592771 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
RANBP3-229ENST00000592771 KIF2CQ99661 725 aa17.55■□□□□ 0.4
RANBP3-229ENST00000592771 OSBPL3Q9H4L5 887 aa17.55■□□□□ 0.4
RANBP3-229ENST00000592771 PCDH11XQ9BZA7 1347 aa17.54■□□□□ 0.4
RANBP3-229ENST00000592771 PCDH11YQ9BZA8 1340 aa17.54■□□□□ 0.4
RANBP3-229ENST00000592771 MRE11P49959 708 aa17.54■□□□□ 0.4
RANBP3-229ENST00000592771 POLA2Q14181 598 aa17.54■□□□□ 0.4
RANBP3-229ENST00000592771 ZNF496Q96IT1 587 aaPredicted RBP17.54■□□□□ 0.4
RANBP3-229ENST00000592771 ROBO1Q9Y6N7 1651 aa17.53■□□□□ 0.4
RANBP3-229ENST00000592771 SALL3Q9BXA9 1300 aa17.53■□□□□ 0.4
RANBP3-229ENST00000592771 RAB3GAP1Q15042 981 aa17.53■□□□□ 0.4
RANBP3-229ENST00000592771 ZCRB1Q8TBF4 217 aaKnown RBP17.53■□□□□ 0.4
RANBP3-229ENST00000592771 LAMB4A4D0S4 1761 aa17.53■□□□□ 0.4
RANBP3-229ENST00000592771 AHDC1Q5TGY3 1603 aaPredicted RBP17.53■□□□□ 0.4
RANBP3-229ENST00000592771 TUBGCP6Q96RT7 1819 aa17.53■□□□□ 0.4
RANBP3-229ENST00000592771 K7ELQ4 463 aaPredicted RBP17.53■□□□□ 0.4
RANBP3-229ENST00000592771 NKX1-1Q15270 411 aaPredicted RBP17.53■□□□□ 0.4
RANBP3-229ENST00000592771 EXOC6BQ9Y2D4 811 aa17.53■□□□□ 0.4
RANBP3-229ENST00000592771 MAP3K2Q9Y2U5 619 aa17.53■□□□□ 0.4
RANBP3-229ENST00000592771 UBR2Q8IWV8 1755 aa17.52■□□□□ 0.4
RANBP3-229ENST00000592771 PAPPAQ13219 1627 aa17.52■□□□□ 0.39
RANBP3-229ENST00000592771 COL22A1Q8NFW1 1626 aaPredicted RBP17.51■□□□□ 0.39
RANBP3-229ENST00000592771 SNRPA1P09661 255 aaKnown RBP17.51■□□□□ 0.39
RANBP3-229ENST00000592771 NBPF7P0C2Y1 421 aaPredicted RBP17.51■□□□□ 0.39
RANBP3-229ENST00000592771 XRCC6P12956 609 aaKnown RBP eCLIP17.51■□□□□ 0.39
RANBP3-229ENST00000592771 IL2RBP14784 551 aa17.51■□□□□ 0.39
RANBP3-229ENST00000592771 LRRCC1Q9C099 1032 aa17.51■□□□□ 0.39
RANBP3-229ENST00000592771 APBB1O00213 710 aa17.51■□□□□ 0.39
RANBP3-229ENST00000592771 CABP4P57796 275 aa17.51■□□□□ 0.39
RANBP3-229ENST00000592771 CLEC17AQ6ZS10 378 aa17.51■□□□□ 0.39
RANBP3-229ENST00000592771 LRP10Q7Z4F1 713 aa17.51■□□□□ 0.39
RANBP3-229ENST00000592771 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
RANBP3-229ENST00000592771 DDX58O95786 925 aaKnown RBP17.5■□□□□ 0.39
RANBP3-229ENST00000592771 MTX1Q13505 466 aa17.5■□□□□ 0.39
RANBP3-229ENST00000592771 PPP1R42Q7Z4L9 355 aa17.5■□□□□ 0.39
RANBP3-229ENST00000592771 TTC5Q8N0Z6 440 aa17.5■□□□□ 0.39
RANBP3-229ENST00000592771 UTYO14607 1347 aa17.5■□□□□ 0.39
RANBP3-229ENST00000592771 ERVV-2B6SEH9 535 aa17.49■□□□□ 0.39
RANBP3-229ENST00000592771 PDE1AP54750 535 aa17.49■□□□□ 0.39
RANBP3-229ENST00000592771 LARP1Q6PKG0 1096 aaKnown RBP17.49■□□□□ 0.39
RANBP3-229ENST00000592771 LINS1Q8NG48 757 aa17.49■□□□□ 0.39
RANBP3-229ENST00000592771 TNPO1Q92973 898 aaKnown RBP17.49■□□□□ 0.39
RANBP3-229ENST00000592771 COL14A1Q05707 1796 aaKnown RBP17.49■□□□□ 0.39
RANBP3-229ENST00000592771 RAB11FIP3O75154 756 aa17.49■□□□□ 0.39
RANBP3-229ENST00000592771 RABEP1Q15276 862 aa17.49■□□□□ 0.39
RANBP3-229ENST00000592771 SDSP20132 328 aa17.48■□□□□ 0.39
RANBP3-229ENST00000592771 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
RANBP3-229ENST00000592771 STAP2Q9UGK3 403 aa17.47■□□□□ 0.39
RANBP3-229ENST00000592771 HDAC5Q9UQL6 1122 aa17.47■□□□□ 0.39
RANBP3-229ENST00000592771 ANO8Q9HCE9 1232 aaPredicted RBP17.47■□□□□ 0.39
RANBP3-229ENST00000592771 USP16Q9Y5T5 823 aa17.47■□□□□ 0.39
RANBP3-229ENST00000592771 KCPQ6ZWJ8 1503 aa17.47■□□□□ 0.39
RANBP3-229ENST00000592771 TOGARAM1Q9Y4F4 1720 aa17.46■□□□□ 0.39
RANBP3-229ENST00000592771 EVA1CP58658 441 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms