RNA–Protein interactions for RNA: ENST00000592706.5

GFAP-223, Transcript of glial fibrillary acidic protein, human

TSL 4

Gene GFAP, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GFAP-223	ENST00000592706	NLGN1	Q8N2Q7	840 aa		13.7	□□□□□ -0.22
GFAP-223	ENST00000592706	FMNL2	Q96PY5	1086 aa		13.7	□□□□□ -0.22
GFAP-223	ENST00000592706	PLEKHF1	Q96S99	279 aa		13.7	□□□□□ -0.22
GFAP-223	ENST00000592706	C10orf71	Q711Q0	1435 aa		13.7	□□□□□ -0.22
GFAP-223	ENST00000592706	DLEC1	Q9Y238	1755 aa		13.69	□□□□□ -0.22
GFAP-223	ENST00000592706	STARD3NL	O95772	234 aa		13.69	□□□□□ -0.22
GFAP-223	ENST00000592706	NFE2L2	Q16236	605 aa		13.69	□□□□□ -0.22
GFAP-223	ENST00000592706	ZNF496	Q96IT1	587 aa	Predicted RBP	13.69	□□□□□ -0.22
GFAP-223	ENST00000592706	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.69	□□□□□ -0.22
GFAP-223	ENST00000592706	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.68	□□□□□ -0.22
GFAP-223	ENST00000592706	ZBTB1	Q9Y2K1	713 aa		13.68	□□□□□ -0.22
GFAP-223	ENST00000592706	ARFGEF1	Q9Y6D6	1849 aa		13.68	□□□□□ -0.22
GFAP-223	ENST00000592706	DCTN1	Q14203	1278 aa		13.67	□□□□□ -0.22
GFAP-223	ENST00000592706	GPR162	Q16538	588 aa		13.67	□□□□□ -0.22
GFAP-223	ENST00000592706	SRP68	Q9UHB9	627 aa	Known RBP	13.67	□□□□□ -0.22
GFAP-223	ENST00000592706	PXDNL	A1KZ92	1463 aa		13.67	□□□□□ -0.22
GFAP-223	ENST00000592706	ZPR1	O75312	459 aa		13.66	□□□□□ -0.22
GFAP-223	ENST00000592706	YY1	P25490	414 aa		13.66	□□□□□ -0.22
GFAP-223	ENST00000592706	WDR43	Q15061	677 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
GFAP-223	ENST00000592706	PELP1	Q8IZL8	1130 aa	Known RBP	13.66	□□□□□ -0.22
GFAP-223	ENST00000592706	KCNQ3	O43525	872 aa		13.65	□□□□□ -0.22
GFAP-223	ENST00000592706	TAF7	Q15545	349 aa	Predicted RBP	13.65	□□□□□ -0.22
GFAP-223	ENST00000592706	PNISR	Q8TF01	805 aa	Known RBP	13.65	□□□□□ -0.22
GFAP-223	ENST00000592706	PARP3	Q9Y6F1	533 aa		13.65	□□□□□ -0.22
GFAP-223	ENST00000592706		A0A087WZG4	1122 aa		13.64	□□□□□ -0.23
GFAP-223	ENST00000592706	CANX	P27824	592 aa	Known RBP	13.64	□□□□□ -0.23
GFAP-223	ENST00000592706	FKBP8	Q14318	412 aa		13.64	□□□□□ -0.23
GFAP-223	ENST00000592706	USPL1	Q5W0Q7	1092 aa		13.64	□□□□□ -0.23
GFAP-223	ENST00000592706	NARF	Q9UHQ1	456 aa		13.64	□□□□□ -0.23
GFAP-223	ENST00000592706	ANKRD31	Q8N7Z5	1873 aa		13.63	□□□□□ -0.23
GFAP-223	ENST00000592706	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.63	□□□□□ -0.23
GFAP-223	ENST00000592706	IL6ST	P40189	918 aa	Predicted RBP	13.63	□□□□□ -0.23
GFAP-223	ENST00000592706	EIF5	P55010	431 aa	Known RBP	13.63	□□□□□ -0.23
GFAP-223	ENST00000592706	LMOD3	Q0VAK6	560 aa		13.63	□□□□□ -0.23
GFAP-223	ENST00000592706	GRIN3B	O60391	1043 aa		13.62	□□□□□ -0.23
GFAP-223	ENST00000592706	SNRPA1	P09661	255 aa	Known RBP	13.62	□□□□□ -0.23
GFAP-223	ENST00000592706	YBX3	P16989	372 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
GFAP-223	ENST00000592706	DDR1	Q08345	913 aa		13.62	□□□□□ -0.23
GFAP-223	ENST00000592706	POLRMT	O00411	1230 aa	Known RBP	13.61	□□□□□ -0.23
GFAP-223	ENST00000592706	TMPO	P42166	694 aa	Known RBP	13.61	□□□□□ -0.23
GFAP-223	ENST00000592706	TGFB2	P61812	414 aa		13.61	□□□□□ -0.23
GFAP-223	ENST00000592706	NPM2	Q86SE8	214 aa	Known RBP	13.61	□□□□□ -0.23
GFAP-223	ENST00000592706	RUNDC1	Q96C34	613 aa		13.61	□□□□□ -0.23
GFAP-223	ENST00000592706	NUP98	P52948	1817 aa		13.61	□□□□□ -0.23
GFAP-223	ENST00000592706	COL11A2	P13942	1736 aa	Predicted RBP	13.61	□□□□□ -0.23
GFAP-223	ENST00000592706	CACNA1S	Q13698	1873 aa		13.61	□□□□□ -0.23
GFAP-223	ENST00000592706	GOLGB1	Q14789	3259 aa	Known RBP	13.6	□□□□□ -0.23
GFAP-223	ENST00000592706	TM4SF1	P30408	202 aa		13.6	□□□□□ -0.23
GFAP-223	ENST00000592706	RIPK4	P57078	832 aa		13.6	□□□□□ -0.23
GFAP-223	ENST00000592706	THUMPD2	Q9BTF0	503 aa	Known RBP	13.6	□□□□□ -0.23
GFAP-223	ENST00000592706	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.6	□□□□□ -0.23
GFAP-223	ENST00000592706	ARFGEF2	Q9Y6D5	1785 aa		13.6	□□□□□ -0.23
GFAP-223	ENST00000592706	ANKRD36C	Q5JPF3	1778 aa		13.59	□□□□□ -0.23
GFAP-223	ENST00000592706	PRAMEF22	A3QJZ6	481 aa		13.59	□□□□□ -0.23
GFAP-223	ENST00000592706	A1BG	P04217	495 aa		13.59	□□□□□ -0.23
GFAP-223	ENST00000592706	NFIX	Q14938	502 aa		13.59	□□□□□ -0.23
GFAP-223	ENST00000592706	CCDC146	Q8IYE0	955 aa		13.59	□□□□□ -0.23
GFAP-223	ENST00000592706	BCL2L12	Q9HB09	334 aa		13.59	□□□□□ -0.23
GFAP-223	ENST00000592706	USP16	Q9Y5T5	823 aa		13.59	□□□□□ -0.23
GFAP-223	ENST00000592706	MIS18A	Q9NYP9	233 aa		13.58	□□□□□ -0.24
GFAP-223	ENST00000592706	ADAMTS8	Q9UP79	889 aa		13.58	□□□□□ -0.24
GFAP-223	ENST00000592706	UTRN	P46939	3433 aa		13.58	□□□□□ -0.24
GFAP-223	ENST00000592706	CARMIL3	Q8ND23	1372 aa		13.58	□□□□□ -0.24
GFAP-223	ENST00000592706	EIF4A1	P60842	406 aa	Known RBP	13.57	□□□□□ -0.24
GFAP-223	ENST00000592706	DZIP3	Q86Y13	1208 aa	Known RBP	13.57	□□□□□ -0.24
GFAP-223	ENST00000592706	BABAM1	Q9NWV8	329 aa		13.57	□□□□□ -0.24
GFAP-223	ENST00000592706	TBC1D2B	Q9UPU7	963 aa		13.57	□□□□□ -0.24
GFAP-223	ENST00000592706	CAMTA2	O94983	1202 aa		13.56	□□□□□ -0.24
GFAP-223	ENST00000592706	SERPINB2	P05120	415 aa		13.56	□□□□□ -0.24
GFAP-223	ENST00000592706	TSPYL4	Q9UJ04	414 aa		13.56	□□□□□ -0.24
GFAP-223	ENST00000592706	RRP7A	Q9Y3A4	280 aa	Known RBP	13.56	□□□□□ -0.24
GFAP-223	ENST00000592706		A0A0G2JLW4	131 aa		13.55	□□□□□ -0.24
GFAP-223	ENST00000592706	NBPF26	B4DH59	902 aa		13.55	□□□□□ -0.24
GFAP-223	ENST00000592706	RGL2	O15211	777 aa		13.55	□□□□□ -0.24
GFAP-223	ENST00000592706	GIGYF1	O75420	1035 aa	Predicted RBP	13.55	□□□□□ -0.24
GFAP-223	ENST00000592706	DPEP1	P16444	411 aa		13.55	□□□□□ -0.24
GFAP-223	ENST00000592706	PIP4K2A	P48426	406 aa	Predicted RBP	13.55	□□□□□ -0.24
GFAP-223	ENST00000592706	TBC1D9B	Q66K14	1250 aa		13.55	□□□□□ -0.24
GFAP-223	ENST00000592706	NBPF10	Q6P3W6	841 aa	Known RBP	13.55	□□□□□ -0.24
GFAP-223	ENST00000592706	NBPF15	Q8N660	670 aa		13.55	□□□□□ -0.24
GFAP-223	ENST00000592706	WWC3	Q9ULE0	1092 aa		13.55	□□□□□ -0.24
GFAP-223	ENST00000592706	SBF1	O95248	1867 aa		13.55	□□□□□ -0.24
GFAP-223	ENST00000592706	NEUROD2	Q15784	382 aa		13.54	□□□□□ -0.24
GFAP-223	ENST00000592706	BICDL1	Q6ZP65	573 aa		13.54	□□□□□ -0.24
GFAP-223	ENST00000592706	ZNF652	Q9Y2D9	606 aa		13.54	□□□□□ -0.24
GFAP-223	ENST00000592706	ERBB4	Q15303	1308 aa		13.54	□□□□□ -0.24
GFAP-223	ENST00000592706	ANP32C	O43423	234 aa		13.53	□□□□□ -0.24
GFAP-223	ENST00000592706	CLEC4G	Q6UXB4	293 aa		13.53	□□□□□ -0.24
GFAP-223	ENST00000592706	TRIM35	Q9UPQ4	493 aa		13.53	□□□□□ -0.24
GFAP-223	ENST00000592706	BCS1L	Q9Y276	419 aa		13.53	□□□□□ -0.24
GFAP-223	ENST00000592706	ADCY9	O60503	1353 aa		13.53	□□□□□ -0.24
GFAP-223	ENST00000592706	CCDC88A	Q3V6T2	1871 aa		13.53	□□□□□ -0.24
GFAP-223	ENST00000592706	KCNA3	P22001	575 aa		13.52	□□□□□ -0.25
GFAP-223	ENST00000592706	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.52	□□□□□ -0.25
GFAP-223	ENST00000592706	PIM2	Q9P1W9	311 aa		13.52	□□□□□ -0.25
GFAP-223	ENST00000592706	TIAM2	Q8IVF5	1701 aa		13.52	□□□□□ -0.25
GFAP-223	ENST00000592706	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.51	□□□□□ -0.25
GFAP-223	ENST00000592706	CHRNA5	P30532	468 aa		13.51	□□□□□ -0.25
GFAP-223	ENST00000592706	SETDB2	Q96T68	719 aa		13.51	□□□□□ -0.25
GFAP-223	ENST00000592706	FER1L6	Q2WGJ9	1857 aa		13.5	□□□□□ -0.25

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