RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 V9GY48 417 aaPredicted RBP10.41□□□□□ -0.74
VMP1-215ENST00000592619 MPSTP25325 297 aa10.4□□□□□ -0.74
VMP1-215ENST00000592619 CENPCQ03188 943 aa10.4□□□□□ -0.74
VMP1-215ENST00000592619 CBLBQ13191 982 aa10.4□□□□□ -0.74
VMP1-215ENST00000592619 ITPKCQ96DU7 683 aa10.4□□□□□ -0.74
VMP1-215ENST00000592619 QTRT2Q9H974 415 aaKnown RBP10.4□□□□□ -0.74
VMP1-215ENST00000592619 STIM2Q9P246 746 aa10.4□□□□□ -0.74
VMP1-215ENST00000592619 USP3Q9Y6I4 520 aa10.4□□□□□ -0.74
VMP1-215ENST00000592619 SERTM1A2A2V5 107 aa10.39□□□□□ -0.75
VMP1-215ENST00000592619 NRG2O14511 850 aaPredicted RBP10.39□□□□□ -0.75
VMP1-215ENST00000592619 FOXC1Q12948 553 aa10.39□□□□□ -0.75
VMP1-215ENST00000592619 ZNF787Q6DD87 383 aa10.39□□□□□ -0.75
VMP1-215ENST00000592619 ALKBH2Q6NS38 261 aa10.39□□□□□ -0.75
VMP1-215ENST00000592619 FBXO33Q7Z6M2 555 aa10.39□□□□□ -0.75
VMP1-215ENST00000592619 ZNF295-AS1Q8N0V1 137 aa10.39□□□□□ -0.75
VMP1-215ENST00000592619 GIPC2Q8TF65 315 aa10.39□□□□□ -0.75
VMP1-215ENST00000592619 CITED4Q96RK1 184 aa10.39□□□□□ -0.75
VMP1-215ENST00000592619 EML1O00423 815 aa10.38□□□□□ -0.75
VMP1-215ENST00000592619 TNFRSF10BO14763 440 aa10.38□□□□□ -0.75
VMP1-215ENST00000592619 ZIC2O95409 532 aaPredicted RBP10.38□□□□□ -0.75
VMP1-215ENST00000592619 ZNF326Q5BKZ1 582 aaKnown RBP10.38□□□□□ -0.75
VMP1-215ENST00000592619 PPARGC1BQ86YN6 1023 aaKnown RBP10.38□□□□□ -0.75
VMP1-215ENST00000592619 NDUFB5O43674 189 aa10.37□□□□□ -0.75
VMP1-215ENST00000592619 NOS2P35228 1153 aa10.37□□□□□ -0.75
VMP1-215ENST00000592619 MRRFQ96E11 262 aaKnown RBP10.37□□□□□ -0.75
VMP1-215ENST00000592619 NLRP3Q96P20 1036 aa10.37□□□□□ -0.75
VMP1-215ENST00000592619 KIAA1522Q9P206 1035 aaPredicted RBP10.37□□□□□ -0.75
VMP1-215ENST00000592619 GDF9O60383 454 aa10.36□□□□□ -0.75
VMP1-215ENST00000592619 EIF1AXP47813 144 aaKnown RBP10.36□□□□□ -0.75
VMP1-215ENST00000592619 WDR4P57081 412 aaKnown RBP10.36□□□□□ -0.75
VMP1-215ENST00000592619 ABTB2Q8N961 1025 aa10.36□□□□□ -0.75
VMP1-215ENST00000592619 ZDHHC1Q8WTX9 485 aa10.36□□□□□ -0.75
VMP1-215ENST00000592619 ZNF775Q96BV0 537 aaPredicted RBP10.36□□□□□ -0.75
VMP1-215ENST00000592619 PRKD2Q9BZL6 878 aa10.36□□□□□ -0.75
VMP1-215ENST00000592619 IGSF5Q9NSI5 407 aa10.36□□□□□ -0.75
VMP1-215ENST00000592619 BRPF3Q9ULD4 1205 aa10.36□□□□□ -0.75
VMP1-215ENST00000592619 LRFN2Q9ULH4 789 aa10.36□□□□□ -0.75
VMP1-215ENST00000592619 J3QL48 77 aa10.35□□□□□ -0.75
VMP1-215ENST00000592619 TIMP2P16035 220 aa10.35□□□□□ -0.75
VMP1-215ENST00000592619 BRD2P25440 801 aaKnown RBP10.35□□□□□ -0.75
VMP1-215ENST00000592619 L3MBTL2Q969R5 705 aa10.35□□□□□ -0.75
VMP1-215ENST00000592619 ZFAND3Q9H8U3 227 aa10.35□□□□□ -0.75
VMP1-215ENST00000592619 TOR4AQ9NXH8 423 aa10.35□□□□□ -0.75
VMP1-215ENST00000592619 TTC24A2A3L6 582 aaPredicted RBP10.34□□□□□ -0.75
VMP1-215ENST00000592619 MEN1O00255 615 aa10.34□□□□□ -0.75
VMP1-215ENST00000592619 TMC7Q7Z402 723 aa10.34□□□□□ -0.75
VMP1-215ENST00000592619 CYP4X1Q8N118 509 aa10.34□□□□□ -0.75
VMP1-215ENST00000592619 AGBL1Q96MI9 1066 aa10.34□□□□□ -0.75
VMP1-215ENST00000592619 CABP1Q9NZU7 370 aa10.34□□□□□ -0.75
VMP1-215ENST00000592619 FZD6O60353 706 aa10.33□□□□□ -0.76
VMP1-215ENST00000592619 VAMP1P23763 118 aa10.33□□□□□ -0.76
VMP1-215ENST00000592619 GPC1P35052 558 aa10.33□□□□□ -0.76
VMP1-215ENST00000592619 RTN1Q16799 776 aa10.33□□□□□ -0.76
VMP1-215ENST00000592619 ALDH16A1Q8IZ83 802 aa10.33□□□□□ -0.76
VMP1-215ENST00000592619 ZSCAN10Q96SZ4 725 aaPredicted RBP10.33□□□□□ -0.76
VMP1-215ENST00000592619 NIFKQ9BYG3 293 aaKnown RBP10.33□□□□□ -0.76
VMP1-215ENST00000592619 RELBQ01201 579 aa10.32□□□□□ -0.76
VMP1-215ENST00000592619 C11orf91Q3C1V1 193 aa10.32□□□□□ -0.76
VMP1-215ENST00000592619 SH3PXD2AQ5TCZ1 1133 aa10.32□□□□□ -0.76
VMP1-215ENST00000592619 C1orf53Q5VUE5 145 aa10.32□□□□□ -0.76
VMP1-215ENST00000592619 RHBDD1Q8TEB9 315 aa10.32□□□□□ -0.76
VMP1-215ENST00000592619 ZNF232Q9UNY5 417 aa10.32□□□□□ -0.76
VMP1-215ENST00000592619 TREHO43280 583 aa10.31□□□□□ -0.76
VMP1-215ENST00000592619 SMPD1P17405 629 aa10.31□□□□□ -0.76
VMP1-215ENST00000592619 EAPPQ56P03 285 aaPredicted RBP10.31□□□□□ -0.76
VMP1-215ENST00000592619 MEIOBQ8N635 442 aa10.31□□□□□ -0.76
VMP1-215ENST00000592619 DMRTB1Q96MA1 342 aa10.31□□□□□ -0.76
VMP1-215ENST00000592619 GRIP2Q9C0E4 1043 aa10.31□□□□□ -0.76
VMP1-215ENST00000592619 ZNF395Q9H8N7 513 aaPredicted RBP10.31□□□□□ -0.76
VMP1-215ENST00000592619 CCDC87Q9NVE4 849 aa10.31□□□□□ -0.76
VMP1-215ENST00000592619 HCN4Q9Y3Q4 1203 aa10.31□□□□□ -0.76
VMP1-215ENST00000592619 ZBTB39O15060 712 aa10.3□□□□□ -0.76
VMP1-215ENST00000592619 GTF2E1P29083 439 aaPredicted RBP10.3□□□□□ -0.76
VMP1-215ENST00000592619 PRR20EP86478 221 aa10.3□□□□□ -0.76
VMP1-215ENST00000592619 PRR20CP86479 221 aa10.3□□□□□ -0.76
VMP1-215ENST00000592619 PRR20DP86480 221 aa10.3□□□□□ -0.76
VMP1-215ENST00000592619 PRR20BP86481 221 aa10.3□□□□□ -0.76
VMP1-215ENST00000592619 PRR20AP86496 221 aa10.3□□□□□ -0.76
VMP1-215ENST00000592619 AAMPQ13685 434 aa10.3□□□□□ -0.76
VMP1-215ENST00000592619 NGLY1Q96IV0 654 aa10.3□□□□□ -0.76
VMP1-215ENST00000592619 FAM129BQ96TA1 746 aa10.3□□□□□ -0.76
VMP1-215ENST00000592619 IGHA2P01877 340 aa10.29□□□□□ -0.76
VMP1-215ENST00000592619 RNF144AP50876 292 aaPredicted RBP10.29□□□□□ -0.76
VMP1-215ENST00000592619 FMR1Q06787 632 aaKnown RBP eCLIP10.29□□□□□ -0.76
VMP1-215ENST00000592619 PDE3BQ13370 1112 aa10.29□□□□□ -0.76
VMP1-215ENST00000592619 DSC3Q14574 896 aa10.29□□□□□ -0.76
VMP1-215ENST00000592619 FAM26DQ5JW98 314 aa10.29□□□□□ -0.76
VMP1-215ENST00000592619 TMEM214Q6NUQ4 689 aaKnown RBP10.29□□□□□ -0.76
VMP1-215ENST00000592619 PHACTR1Q9C0D0 580 aa10.29□□□□□ -0.76
VMP1-215ENST00000592619 TAGLNQ01995 201 aaKnown RBP10.28□□□□□ -0.76
VMP1-215ENST00000592619 DGKZQ13574 1117 aa10.28□□□□□ -0.76
VMP1-215ENST00000592619 ETFBKMTQ8IXQ9 262 aa10.28□□□□□ -0.76
VMP1-215ENST00000592619 TSEN34Q9BSV6 310 aaKnown RBP10.28□□□□□ -0.76
VMP1-215ENST00000592619 PARP3Q9Y6F1 533 aa10.28□□□□□ -0.76
VMP1-215ENST00000592619 P4HBP07237 508 aaKnown RBP10.27□□□□□ -0.77
VMP1-215ENST00000592619 USP5P45974 858 aa10.27□□□□□ -0.77
VMP1-215ENST00000592619 GNASQ5JWF2 1037 aa10.27□□□□□ -0.77
VMP1-215ENST00000592619 ALKBH8Q96BT7 664 aaKnown RBP10.27□□□□□ -0.77
VMP1-215ENST00000592619 BCL11AQ9H165 835 aa10.27□□□□□ -0.77
VMP1-215ENST00000592619 TNFRSF10AO00220 468 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms