RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 HTATSF1O43719 755 aaKnown RBP18.44■□□□□ 0.54
APOC1-208ENST00000592535 STARD3NLO95772 234 aa18.44■□□□□ 0.54
APOC1-208ENST00000592535 NEFMP07197 916 aa18.44■□□□□ 0.54
APOC1-208ENST00000592535 CANXP27824 592 aaKnown RBP18.44■□□□□ 0.54
APOC1-208ENST00000592535 FMNL2Q96PY5 1086 aa18.44■□□□□ 0.54
APOC1-208ENST00000592535 WWC3Q9ULE0 1092 aa18.44■□□□□ 0.54
APOC1-208ENST00000592535 PARP3Q9Y6F1 533 aa18.44■□□□□ 0.54
APOC1-208ENST00000592535 GRIN3BO60391 1043 aa18.43■□□□□ 0.54
APOC1-208ENST00000592535 ZPR1O75312 459 aa18.43■□□□□ 0.54
APOC1-208ENST00000592535 USPL1Q5W0Q7 1092 aa18.43■□□□□ 0.54
APOC1-208ENST00000592535 PXDNLA1KZ92 1463 aa18.43■□□□□ 0.54
APOC1-208ENST00000592535 DDR1Q08345 913 aa18.42■□□□□ 0.54
APOC1-208ENST00000592535 TEX13AQ9BXU3 409 aaPredicted RBP18.42■□□□□ 0.54
APOC1-208ENST00000592535 NARFQ9UHQ1 456 aa18.42■□□□□ 0.54
APOC1-208ENST00000592535 MYBBP1AQ9BQG0 1328 aaKnown RBP18.42■□□□□ 0.54
APOC1-208ENST00000592535 AFDNP55196 1824 aaKnown RBP18.42■□□□□ 0.54
APOC1-208ENST00000592535 BRCA1P38398 1863 aaKnown RBP18.41■□□□□ 0.54
APOC1-208ENST00000592535 UTRNP46939 3433 aa18.4■□□□□ 0.54
APOC1-208ENST00000592535 EIF5P55010 431 aaKnown RBP18.4■□□□□ 0.54
APOC1-208ENST00000592535 NFE2L2Q16236 605 aa18.4■□□□□ 0.54
APOC1-208ENST00000592535 KDM3BQ7LBC6 1761 aa18.4■□□□□ 0.54
APOC1-208ENST00000592535 SCN7AQ01118 1682 aa18.39■□□□□ 0.53
APOC1-208ENST00000592535 TM4SF1P30408 202 aa18.39■□□□□ 0.53
APOC1-208ENST00000592535 TGFB2P61812 414 aa18.39■□□□□ 0.53
APOC1-208ENST00000592535 ZNF784Q8NCA9 323 aaPredicted RBP18.39■□□□□ 0.53
APOC1-208ENST00000592535 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
APOC1-208ENST00000592535 BCL2L12Q9HB09 334 aa18.39■□□□□ 0.53
APOC1-208ENST00000592535 MAPK8IP3Q9UPT6 1336 aa18.39■□□□□ 0.53
APOC1-208ENST00000592535 A0A0G2JLW4 131 aa18.38■□□□□ 0.53
APOC1-208ENST00000592535 PRAMEF22A3QJZ6 481 aa18.38■□□□□ 0.53
APOC1-208ENST00000592535 POLRMTO00411 1230 aaKnown RBP18.38■□□□□ 0.53
APOC1-208ENST00000592535 A1BGP04217 495 aa18.38■□□□□ 0.53
APOC1-208ENST00000592535 TAF7Q15545 349 aaPredicted RBP18.38■□□□□ 0.53
APOC1-208ENST00000592535 NRXN2Q9P2S2 1712 aa18.37■□□□□ 0.53
APOC1-208ENST00000592535 NFIXQ14938 502 aa18.37■□□□□ 0.53
APOC1-208ENST00000592535 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
APOC1-208ENST00000592535 MIS18AQ9NYP9 233 aa18.37■□□□□ 0.53
APOC1-208ENST00000592535 ZNF330Q9Y3S2 320 aaPredicted RBP18.37■□□□□ 0.53
APOC1-208ENST00000592535 USP16Q9Y5T5 823 aa18.37■□□□□ 0.53
APOC1-208ENST00000592535 LAMB4A4D0S4 1761 aa18.37■□□□□ 0.53
APOC1-208ENST00000592535 A0A087WZG4 1122 aa18.36■□□□□ 0.53
APOC1-208ENST00000592535 SNRPA1P09661 255 aaKnown RBP18.36■□□□□ 0.53
APOC1-208ENST00000592535 DPEP1P16444 411 aa18.36■□□□□ 0.53
APOC1-208ENST00000592535 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
APOC1-208ENST00000592535 IL6STP40189 918 aaPredicted RBP18.36■□□□□ 0.53
APOC1-208ENST00000592535 GOLGB1Q14789 3259 aaKnown RBP18.36■□□□□ 0.53
APOC1-208ENST00000592535 BCORQ6W2J9 1755 aa18.35■□□□□ 0.53
APOC1-208ENST00000592535 TBC1D2BQ9UPU7 963 aa18.35■□□□□ 0.53
APOC1-208ENST00000592535 PIP4K2AP48426 406 aaPredicted RBP18.34■□□□□ 0.53
APOC1-208ENST00000592535 PRKRIP1Q9H875 184 aaPredicted RBP18.34■□□□□ 0.53
APOC1-208ENST00000592535 ARFGEF1Q9Y6D6 1849 aa18.33■□□□□ 0.53
APOC1-208ENST00000592535 KCNA3P22001 575 aa18.33■□□□□ 0.52
APOC1-208ENST00000592535 BCS1LQ9Y276 419 aa18.33■□□□□ 0.52
APOC1-208ENST00000592535 SERPINB2P05120 415 aa18.32■□□□□ 0.52
APOC1-208ENST00000592535 BICDL1Q6ZP65 573 aa18.32■□□□□ 0.52
APOC1-208ENST00000592535 PNISRQ8TF01 805 aaKnown RBP18.32■□□□□ 0.52
APOC1-208ENST00000592535 RIPK4P57078 832 aa18.31■□□□□ 0.52
APOC1-208ENST00000592535 TBC1D9BQ66K14 1250 aa18.31■□□□□ 0.52
APOC1-208ENST00000592535 NPM2Q86SE8 214 aaKnown RBP18.31■□□□□ 0.52
APOC1-208ENST00000592535 CCDC146Q8IYE0 955 aa18.31■□□□□ 0.52
APOC1-208ENST00000592535 DLEC1Q9Y238 1755 aa18.3■□□□□ 0.52
APOC1-208ENST00000592535 CAMTA2O94983 1202 aa18.3■□□□□ 0.52
APOC1-208ENST00000592535 CHRNA5P30532 468 aa18.3■□□□□ 0.52
APOC1-208ENST00000592535 TMPOP42166 694 aaKnown RBP18.3■□□□□ 0.52
APOC1-208ENST00000592535 WDR43Q15061 677 aaKnown RBP eCLIP18.3■□□□□ 0.52
APOC1-208ENST00000592535 DZIP3Q86Y13 1208 aaKnown RBP18.3■□□□□ 0.52
APOC1-208ENST00000592535 ANKRD31Q8N7Z5 1873 aa18.29■□□□□ 0.52
APOC1-208ENST00000592535 NBPF26B4DH59 902 aa18.29■□□□□ 0.52
APOC1-208ENST00000592535 EIF4A1P60842 406 aaKnown RBP18.29■□□□□ 0.52
APOC1-208ENST00000592535 NBPF10Q6P3W6 841 aaKnown RBP18.29■□□□□ 0.52
APOC1-208ENST00000592535 NBPF15Q8N660 670 aa18.29■□□□□ 0.52
APOC1-208ENST00000592535 RRP7AQ9Y3A4 280 aaKnown RBP18.29■□□□□ 0.52
APOC1-208ENST00000592535 CARMIL3Q8ND23 1372 aa18.29■□□□□ 0.52
APOC1-208ENST00000592535 PIM2Q9P1W9 311 aa18.28■□□□□ 0.52
APOC1-208ENST00000592535 ATP10DQ9P241 1426 aa18.27■□□□□ 0.52
APOC1-208ENST00000592535 GIGYF1O75420 1035 aaPredicted RBP18.27■□□□□ 0.52
APOC1-208ENST00000592535 RUNDC1Q96C34 613 aa18.27■□□□□ 0.52
APOC1-208ENST00000592535 ADAMTS8Q9UP79 889 aa18.27■□□□□ 0.52
APOC1-208ENST00000592535 ADCY9O60503 1353 aa18.27■□□□□ 0.51
APOC1-208ENST00000592535 LMOD3Q0VAK6 560 aa18.26■□□□□ 0.51
APOC1-208ENST00000592535 NEUROD2Q15784 382 aa18.26■□□□□ 0.51
APOC1-208ENST00000592535 DALRD3Q5D0E6 543 aaKnown RBP18.25■□□□□ 0.51
APOC1-208ENST00000592535 ARHGAP27Q6ZUM4 889 aa18.25■□□□□ 0.51
APOC1-208ENST00000592535 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
APOC1-208ENST00000592535 COL11A2P13942 1736 aaPredicted RBP18.24■□□□□ 0.51
APOC1-208ENST00000592535 PRR5LQ6MZQ0 368 aa18.24■□□□□ 0.51
APOC1-208ENST00000592535 CCDC24Q8N4L8 307 aa18.24■□□□□ 0.51
APOC1-208ENST00000592535 SETDB2Q96T68 719 aa18.24■□□□□ 0.51
APOC1-208ENST00000592535 NUP98P52948 1817 aa18.23■□□□□ 0.51
APOC1-208ENST00000592535 CLEC4GQ6UXB4 293 aa18.22■□□□□ 0.51
APOC1-208ENST00000592535 C2CD5Q86YS7 1000 aa18.22■□□□□ 0.51
APOC1-208ENST00000592535 TRIM35Q9UPQ4 493 aa18.22■□□□□ 0.51
APOC1-208ENST00000592535 ZNF316A6NFI3 1004 aaPredicted RBP18.21■□□□□ 0.51
APOC1-208ENST00000592535 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
APOC1-208ENST00000592535 BABAM1Q9NWV8 329 aa18.21■□□□□ 0.51
APOC1-208ENST00000592535 ZNF652Q9Y2D9 606 aa18.21■□□□□ 0.51
APOC1-208ENST00000592535 SBF1O95248 1867 aa18.2■□□□□ 0.5
APOC1-208ENST00000592535 CACNA1SQ13698 1873 aa18.2■□□□□ 0.5
APOC1-208ENST00000592535 H0YIN7 160 aa18.2■□□□□ 0.5
APOC1-208ENST00000592535 CNBD1Q8NA66 436 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms