RNA–Protein interactions for RNA: ENST00000592159.1

KDM4B-209, Transcript of lysine demethylase 4B, humanhuman

TSL 3

Gene KDM4B, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-209ENST00000592159 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
KDM4B-209ENST00000592159 RC3H1Q5TC82 1133 aaKnown RBP12.63□□□□□ -0.39
KDM4B-209ENST00000592159 C16orf71Q8IYS4 520 aaPredicted RBP12.63□□□□□ -0.39
KDM4B-209ENST00000592159 DCAF5Q96JK2 942 aa12.63□□□□□ -0.39
KDM4B-209ENST00000592159 E9PSI1 815 aa12.62□□□□□ -0.39
KDM4B-209ENST00000592159 TOMM70O94826 608 aa12.62□□□□□ -0.39
KDM4B-209ENST00000592159 NEFLP07196 543 aa12.62□□□□□ -0.39
KDM4B-209ENST00000592159 SLFN5Q08AF3 891 aa12.62□□□□□ -0.39
KDM4B-209ENST00000592159 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
KDM4B-209ENST00000592159 WDR63Q8IWG1 891 aa12.62□□□□□ -0.39
KDM4B-209ENST00000592159 PTCD1O75127 700 aaKnown RBP12.61□□□□□ -0.39
KDM4B-209ENST00000592159 ZNF530Q6P9A1 599 aaPredicted RBP12.61□□□□□ -0.39
KDM4B-209ENST00000592159 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
KDM4B-209ENST00000592159 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
KDM4B-209ENST00000592159 NCAPD2Q15021 1401 aa12.61□□□□□ -0.39
KDM4B-209ENST00000592159 GYS1P13807 737 aa12.6□□□□□ -0.39
KDM4B-209ENST00000592159 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
KDM4B-209ENST00000592159 AMOTQ4VCS5 1084 aa12.6□□□□□ -0.39
KDM4B-209ENST00000592159 C1orf141Q5JVX7 400 aa12.6□□□□□ -0.39
KDM4B-209ENST00000592159 SPINK5Q9NQ38 1064 aaPredicted RBP12.6□□□□□ -0.39
KDM4B-209ENST00000592159 PIM2Q9P1W9 311 aa12.6□□□□□ -0.39
KDM4B-209ENST00000592159 KDRP35968 1356 aa12.59□□□□□ -0.39
KDM4B-209ENST00000592159 N4BP2Q86UW6 1770 aaPredicted RBP12.59□□□□□ -0.39
KDM4B-209ENST00000592159 C9orf131Q5VYM1 1079 aa12.59□□□□□ -0.39
KDM4B-209ENST00000592159 DUSP27Q5VZP5 1158 aa12.59□□□□□ -0.39
KDM4B-209ENST00000592159 NMRK2Q9NPI5 230 aa12.59□□□□□ -0.39
KDM4B-209ENST00000592159 CNTNAP4Q9C0A0 1308 aa12.59□□□□□ -0.39
KDM4B-209ENST00000592159 PXDNLA1KZ92 1463 aa12.59□□□□□ -0.39
KDM4B-209ENST00000592159 MTHFSDQ2M296 383 aaKnown RBP12.58□□□□□ -0.4
KDM4B-209ENST00000592159 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
KDM4B-209ENST00000592159 NFATC2IPQ8NCF5 419 aa12.58□□□□□ -0.4
KDM4B-209ENST00000592159 MYH16Q9H6N6 1097 aa12.58□□□□□ -0.4
KDM4B-209ENST00000592159 RCAN3Q9UKA8 241 aa12.58□□□□□ -0.4
KDM4B-209ENST00000592159 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.4
KDM4B-209ENST00000592159 CICQ96RK0 1608 aaPredicted RBP12.58□□□□□ -0.4
KDM4B-209ENST00000592159 CRKLP46109 303 aaKnown RBP12.57□□□□□ -0.4
KDM4B-209ENST00000592159 CALD1Q05682 793 aaKnown RBP12.57□□□□□ -0.4
KDM4B-209ENST00000592159 TRMT2AQ8IZ69 625 aaKnown RBP12.57□□□□□ -0.4
KDM4B-209ENST00000592159 GAS2L2Q8NHY3 880 aa12.57□□□□□ -0.4
KDM4B-209ENST00000592159 THUMPD2Q9BTF0 503 aaKnown RBP12.57□□□□□ -0.4
KDM4B-209ENST00000592159 SRP68Q9UHB9 627 aaKnown RBP12.57□□□□□ -0.4
KDM4B-209ENST00000592159 ZPR1O75312 459 aa12.56□□□□□ -0.4
KDM4B-209ENST00000592159 KCNA3P22001 575 aa12.56□□□□□ -0.4
KDM4B-209ENST00000592159 DCTN1Q14203 1278 aa12.56□□□□□ -0.4
KDM4B-209ENST00000592159 FKBP8Q14318 412 aa12.56□□□□□ -0.4
KDM4B-209ENST00000592159 DNAJC5GQ8N7S2 189 aa12.56□□□□□ -0.4
KDM4B-209ENST00000592159 RBM46Q8TBY0 533 aaKnown RBP12.56□□□□□ -0.4
KDM4B-209ENST00000592159 RTF1Q92541 710 aaKnown RBP12.56□□□□□ -0.4
KDM4B-209ENST00000592159 IL16Q14005 1332 aa12.56□□□□□ -0.4
KDM4B-209ENST00000592159 C10orf71Q711Q0 1435 aa12.55□□□□□ -0.4
KDM4B-209ENST00000592159 DLG5Q8TDM6 1919 aa12.55□□□□□ -0.4
KDM4B-209ENST00000592159 IRX6P78412 446 aaPredicted RBP12.55□□□□□ -0.4
KDM4B-209ENST00000592159 RRAGCQ9HB90 399 aa12.55□□□□□ -0.4
KDM4B-209ENST00000592159 RNF181Q9P0P0 153 aa12.55□□□□□ -0.4
KDM4B-209ENST00000592159 KDM2BQ8NHM5 1336 aa12.55□□□□□ -0.4
KDM4B-209ENST00000592159 MCM10Q7L590 875 aa12.54□□□□□ -0.4
KDM4B-209ENST00000592159 TSR2Q969E8 191 aaKnown RBP12.54□□□□□ -0.4
KDM4B-209ENST00000592159 KIF13BQ9NQT8 1826 aa12.53□□□□□ -0.4
KDM4B-209ENST00000592159 CHRNA5P30532 468 aa12.53□□□□□ -0.4
KDM4B-209ENST00000592159 GNAI1P63096 354 aa12.53□□□□□ -0.4
KDM4B-209ENST00000592159 FSTL1Q12841 308 aa12.53□□□□□ -0.4
KDM4B-209ENST00000592159 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
KDM4B-209ENST00000592159 C4AP0C0L4 1744 aa12.53□□□□□ -0.4
KDM4B-209ENST00000592159 PLEKHG2Q9H7P9 1386 aa12.53□□□□□ -0.4
KDM4B-209ENST00000592159 GNAT3A8MTJ3 354 aa12.52□□□□□ -0.41
KDM4B-209ENST00000592159 HTRA3P83110 453 aa12.52□□□□□ -0.41
KDM4B-209ENST00000592159 DDR1Q08345 913 aa12.52□□□□□ -0.41
KDM4B-209ENST00000592159 USPL1Q5W0Q7 1092 aa12.52□□□□□ -0.41
KDM4B-209ENST00000592159 USP42Q9H9J4 1324 aaKnown RBP12.52□□□□□ -0.41
KDM4B-209ENST00000592159 TM4SF1P30408 202 aa12.51□□□□□ -0.41
KDM4B-209ENST00000592159 EXOSC9Q06265 439 aaKnown RBP12.51□□□□□ -0.41
KDM4B-209ENST00000592159 INTS5Q6P9B9 1019 aaKnown RBP12.51□□□□□ -0.41
KDM4B-209ENST00000592159 DNAJC10Q8IXB1 793 aa12.51□□□□□ -0.41
KDM4B-209ENST00000592159 IFT57Q9NWB7 429 aa12.51□□□□□ -0.41
KDM4B-209ENST00000592159 KDM6AO15550 1401 aaPredicted RBP12.51□□□□□ -0.41
KDM4B-209ENST00000592159 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
KDM4B-209ENST00000592159 POLRMTO00411 1230 aaKnown RBP12.5□□□□□ -0.41
KDM4B-209ENST00000592159 HTATSF1O43719 755 aaKnown RBP12.5□□□□□ -0.41
KDM4B-209ENST00000592159 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
KDM4B-209ENST00000592159 KLRG1Q96E93 195 aa12.5□□□□□ -0.41
KDM4B-209ENST00000592159 ZNF831Q5JPB2 1677 aa12.5□□□□□ -0.41
KDM4B-209ENST00000592159 KIAA1551Q9HCM1 1747 aa12.5□□□□□ -0.41
KDM4B-209ENST00000592159 COL5A3P25940 1745 aaPredicted RBP12.49□□□□□ -0.41
KDM4B-209ENST00000592159 KCPQ6ZWJ8 1503 aa12.49□□□□□ -0.41
KDM4B-209ENST00000592159 RRP1P56182 461 aaKnown RBP12.49□□□□□ -0.41
KDM4B-209ENST00000592159 CFAP44Q96MT7 982 aa12.49□□□□□ -0.41
KDM4B-209ENST00000592159 LGR6Q9HBX8 967 aa12.49□□□□□ -0.41
KDM4B-209ENST00000592159 SLC39A6Q13433 755 aa12.48□□□□□ -0.41
KDM4B-209ENST00000592159 SMC1BQ8NDV3 1235 aa12.48□□□□□ -0.41
KDM4B-209ENST00000592159 SLC52A2Q9HAB3 445 aa12.48□□□□□ -0.41
KDM4B-209ENST00000592159 MBIPQ9NS73 344 aa12.48□□□□□ -0.41
KDM4B-209ENST00000592159 NARFQ9UHQ1 456 aa12.48□□□□□ -0.41
KDM4B-209ENST00000592159 RNF123Q5XPI4 1314 aa12.47□□□□□ -0.41
KDM4B-209ENST00000592159 ARFGEF1Q9Y6D6 1849 aa12.47□□□□□ -0.41
KDM4B-209ENST00000592159 PLIN1O60240 522 aa12.47□□□□□ -0.41
KDM4B-209ENST00000592159 SERPINB2P05120 415 aa12.47□□□□□ -0.41
KDM4B-209ENST00000592159 ZNF853P0CG23 659 aa12.47□□□□□ -0.41
KDM4B-209ENST00000592159 CYP19A1P11511 503 aaPredicted RBP12.47□□□□□ -0.41
KDM4B-209ENST00000592159 VEGFAP15692 232 aaPredicted RBP12.47□□□□□ -0.41
KDM4B-209ENST00000592159 RASSF7Q02833 373 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms