RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.81
ERCC1-213ENST00000592023 CANXP27824 592 aaKnown RBP20.14■□□□□ 0.81
ERCC1-213ENST00000592023 CHD4Q14839 1912 aa20.14■□□□□ 0.81
ERCC1-213ENST00000592023 KIAA1551Q9HCM1 1747 aa20.13■□□□□ 0.81
ERCC1-213ENST00000592023 STARD3NLO95772 234 aa20.13■□□□□ 0.81
ERCC1-213ENST00000592023 YBX3P16989 372 aaKnown RBP eCLIP20.13■□□□□ 0.81
ERCC1-213ENST00000592023 FKBP8Q14318 412 aa20.13■□□□□ 0.81
ERCC1-213ENST00000592023 NFE2L2Q16236 605 aa20.13■□□□□ 0.81
ERCC1-213ENST00000592023 USPL1Q5W0Q7 1092 aa20.12■□□□□ 0.81
ERCC1-213ENST00000592023 PNNQ9H307 717 aaKnown RBP20.12■□□□□ 0.81
ERCC1-213ENST00000592023 WWC3Q9ULE0 1092 aa20.12■□□□□ 0.81
ERCC1-213ENST00000592023 PARP3Q9Y6F1 533 aa20.12■□□□□ 0.81
ERCC1-213ENST00000592023 KDM3BQ7LBC6 1761 aa20.12■□□□□ 0.81
ERCC1-213ENST00000592023 SCN7AQ01118 1682 aa20.12■□□□□ 0.81
ERCC1-213ENST00000592023 ZPR1O75312 459 aa20.11■□□□□ 0.81
ERCC1-213ENST00000592023 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
ERCC1-213ENST00000592023 N4BP2Q86UW6 1770 aaPredicted RBP20.11■□□□□ 0.81
ERCC1-213ENST00000592023 THUMPD2Q9BTF0 503 aaKnown RBP20.1■□□□□ 0.81
ERCC1-213ENST00000592023 TEX13AQ9BXU3 409 aaPredicted RBP20.1■□□□□ 0.81
ERCC1-213ENST00000592023 PRKRIP1Q9H875 184 aaPredicted RBP20.1■□□□□ 0.81
ERCC1-213ENST00000592023 ZNF330Q9Y3S2 320 aaPredicted RBP20.1■□□□□ 0.81
ERCC1-213ENST00000592023 LAMB4A4D0S4 1761 aa20.1■□□□□ 0.81
ERCC1-213ENST00000592023 DDR1Q08345 913 aa20.09■□□□□ 0.81
ERCC1-213ENST00000592023 NARFQ9UHQ1 456 aa20.09■□□□□ 0.81
ERCC1-213ENST00000592023 PRAMEF22A3QJZ6 481 aa20.08■□□□□ 0.81
ERCC1-213ENST00000592023 A1BGP04217 495 aa20.07■□□□□ 0.8
ERCC1-213ENST00000592023 WDR43Q15061 677 aaKnown RBP eCLIP20.07■□□□□ 0.8
ERCC1-213ENST00000592023 TAF7Q15545 349 aaPredicted RBP20.07■□□□□ 0.8
ERCC1-213ENST00000592023 MIS18AQ9NYP9 233 aa20.07■□□□□ 0.8
ERCC1-213ENST00000592023 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
ERCC1-213ENST00000592023 EIF5P55010 431 aaKnown RBP20.06■□□□□ 0.8
ERCC1-213ENST00000592023 CCDC146Q8IYE0 955 aa20.06■□□□□ 0.8
ERCC1-213ENST00000592023 BCL2L12Q9HB09 334 aa20.06■□□□□ 0.8
ERCC1-213ENST00000592023 AFDNP55196 1824 aaKnown RBP20.05■□□□□ 0.8
ERCC1-213ENST00000592023 A0A087WZG4 1122 aa20.05■□□□□ 0.8
ERCC1-213ENST00000592023 POLRMTO00411 1230 aaKnown RBP20.05■□□□□ 0.8
ERCC1-213ENST00000592023 GRIN3BO60391 1043 aa20.05■□□□□ 0.8
ERCC1-213ENST00000592023 SNRPA1P09661 255 aaKnown RBP20.05■□□□□ 0.8
ERCC1-213ENST00000592023 PIP4K2AP48426 406 aaPredicted RBP20.05■□□□□ 0.8
ERCC1-213ENST00000592023 USP16Q9Y5T5 823 aa20.05■□□□□ 0.8
ERCC1-213ENST00000592023 IL6STP40189 918 aaPredicted RBP20.04■□□□□ 0.8
ERCC1-213ENST00000592023 NFIXQ14938 502 aa20.04■□□□□ 0.8
ERCC1-213ENST00000592023 NRXN2Q9P2S2 1712 aa20.04■□□□□ 0.8
ERCC1-213ENST00000592023 BRCA1P38398 1863 aaKnown RBP20.03■□□□□ 0.8
ERCC1-213ENST00000592023 TM4SF1P30408 202 aa20.03■□□□□ 0.8
ERCC1-213ENST00000592023 RIPK4P57078 832 aa20.03■□□□□ 0.8
ERCC1-213ENST00000592023 PNISRQ8TF01 805 aaKnown RBP20.03■□□□□ 0.8
ERCC1-213ENST00000592023 TBC1D2BQ9UPU7 963 aa20.03■□□□□ 0.8
ERCC1-213ENST00000592023 RRP7AQ9Y3A4 280 aaKnown RBP20.03■□□□□ 0.8
ERCC1-213ENST00000592023 A0A0G2JLW4 131 aa20.02■□□□□ 0.8
ERCC1-213ENST00000592023 TMPOP42166 694 aaKnown RBP20.02■□□□□ 0.8
ERCC1-213ENST00000592023 TGFB2P61812 414 aa20.02■□□□□ 0.8
ERCC1-213ENST00000592023 NPM2Q86SE8 214 aaKnown RBP20.02■□□□□ 0.8
ERCC1-213ENST00000592023 DPEP1P16444 411 aa20.01■□□□□ 0.79
ERCC1-213ENST00000592023 BICDL1Q6ZP65 573 aa20.01■□□□□ 0.79
ERCC1-213ENST00000592023 UTRNP46939 3433 aa20.01■□□□□ 0.79
ERCC1-213ENST00000592023 ZNF316A6NFI3 1004 aaPredicted RBP20■□□□□ 0.79
ERCC1-213ENST00000592023 LMOD3Q0VAK6 560 aa20■□□□□ 0.79
ERCC1-213ENST00000592023 RUNDC1Q96C34 613 aa20■□□□□ 0.79
ERCC1-213ENST00000592023 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
ERCC1-213ENST00000592023 DZIP3Q86Y13 1208 aaKnown RBP19.99■□□□□ 0.79
ERCC1-213ENST00000592023 ZNF784Q8NCA9 323 aaPredicted RBP19.99■□□□□ 0.79
ERCC1-213ENST00000592023 ADAMTS8Q9UP79 889 aa19.99■□□□□ 0.79
ERCC1-213ENST00000592023 BCS1LQ9Y276 419 aa19.99■□□□□ 0.79
ERCC1-213ENST00000592023 CAMTA2O94983 1202 aa19.98■□□□□ 0.79
ERCC1-213ENST00000592023 SERPINB2P05120 415 aa19.98■□□□□ 0.79
ERCC1-213ENST00000592023 EIF4A1P60842 406 aaKnown RBP19.98■□□□□ 0.79
ERCC1-213ENST00000592023 TBC1D9BQ66K14 1250 aa19.98■□□□□ 0.79
ERCC1-213ENST00000592023 TSPYL4Q9UJ04 414 aa19.98■□□□□ 0.79
ERCC1-213ENST00000592023 CARMIL3Q8ND23 1372 aa19.97■□□□□ 0.79
ERCC1-213ENST00000592023 GOLGB1Q14789 3259 aaKnown RBP19.97■□□□□ 0.79
ERCC1-213ENST00000592023 NBPF26B4DH59 902 aa19.97■□□□□ 0.79
ERCC1-213ENST00000592023 NBPF10Q6P3W6 841 aaKnown RBP19.97■□□□□ 0.79
ERCC1-213ENST00000592023 NBPF15Q8N660 670 aa19.97■□□□□ 0.79
ERCC1-213ENST00000592023 DLEC1Q9Y238 1755 aa19.96■□□□□ 0.79
ERCC1-213ENST00000592023 CHRNA5P30532 468 aa19.96■□□□□ 0.79
ERCC1-213ENST00000592023 ARFGEF1Q9Y6D6 1849 aa19.95■□□□□ 0.78
ERCC1-213ENST00000592023 GIGYF1O75420 1035 aaPredicted RBP19.95■□□□□ 0.78
ERCC1-213ENST00000592023 ANKRD31Q8N7Z5 1873 aa19.94■□□□□ 0.78
ERCC1-213ENST00000592023 KCNA3P22001 575 aa19.94■□□□□ 0.78
ERCC1-213ENST00000592023 PIM2Q9P1W9 311 aa19.93■□□□□ 0.78
ERCC1-213ENST00000592023 COL11A2P13942 1736 aaPredicted RBP19.93■□□□□ 0.78
ERCC1-213ENST00000592023 TRIM35Q9UPQ4 493 aa19.92■□□□□ 0.78
ERCC1-213ENST00000592023 CCDC184Q52MB2 194 aa19.91■□□□□ 0.78
ERCC1-213ENST00000592023 NGEFQ8N5V2 710 aa19.91■□□□□ 0.78
ERCC1-213ENST00000592023 ZNF652Q9Y2D9 606 aa19.91■□□□□ 0.78
ERCC1-213ENST00000592023 ATP10DQ9P241 1426 aa19.91■□□□□ 0.78
ERCC1-213ENST00000592023 NPHP1O15259 732 aa19.9■□□□□ 0.78
ERCC1-213ENST00000592023 DALRD3Q5D0E6 543 aaKnown RBP19.9■□□□□ 0.78
ERCC1-213ENST00000592023 PRR5LQ6MZQ0 368 aa19.9■□□□□ 0.78
ERCC1-213ENST00000592023 CCDC24Q8N4L8 307 aa19.9■□□□□ 0.78
ERCC1-213ENST00000592023 SETDB2Q96T68 719 aa19.9■□□□□ 0.78
ERCC1-213ENST00000592023 LAS1LQ9Y4W2 734 aaKnown RBP19.9■□□□□ 0.78
ERCC1-213ENST00000592023 ADCY9O60503 1353 aa19.9■□□□□ 0.78
ERCC1-213ENST00000592023 MYL6BP14649 208 aa19.89■□□□□ 0.77
ERCC1-213ENST00000592023 CNBD1Q8NA66 436 aa19.89■□□□□ 0.77
ERCC1-213ENST00000592023 BABAM1Q9NWV8 329 aa19.89■□□□□ 0.77
ERCC1-213ENST00000592023 ARHGAP27Q6ZUM4 889 aa19.88■□□□□ 0.77
ERCC1-213ENST00000592023 C2CD5Q86YS7 1000 aa19.88■□□□□ 0.77
ERCC1-213ENST00000592023 APAF1O14727 1248 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms