RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 SMIM5Q71RC9 77 aa14.2□□□□□ -0.14
VPS4B-207ENST00000591519 SLC4A9Q96Q91 983 aa14.2□□□□□ -0.14
VPS4B-207ENST00000591519 ZNF831Q5JPB2 1677 aa14.2□□□□□ -0.14
VPS4B-207ENST00000591519 PLSCR2Q9NRY7 297 aa14.19□□□□□ -0.14
VPS4B-207ENST00000591519 KDRP35968 1356 aa14.19□□□□□ -0.14
VPS4B-207ENST00000591519 GOLGB1Q14789 3259 aaKnown RBP14.19□□□□□ -0.14
VPS4B-207ENST00000591519 POTEMA6NI47 508 aa14.18□□□□□ -0.14
VPS4B-207ENST00000591519 GNPATO15228 680 aa14.18□□□□□ -0.14
VPS4B-207ENST00000591519 PER1O15534 1290 aaPredicted RBP14.18□□□□□ -0.14
VPS4B-207ENST00000591519 SEC24BO95487 1268 aa14.18□□□□□ -0.14
VPS4B-207ENST00000591519 MTHFSP49914 203 aa14.18□□□□□ -0.14
VPS4B-207ENST00000591519 SULT6B1Q6IMI4 303 aa14.18□□□□□ -0.14
VPS4B-207ENST00000591519 ZNF530Q6P9A1 599 aaPredicted RBP14.18□□□□□ -0.14
VPS4B-207ENST00000591519 AEBP1Q8IUX7 1158 aa14.18□□□□□ -0.14
VPS4B-207ENST00000591519 SCUBE2Q9NQ36 999 aa14.18□□□□□ -0.14
VPS4B-207ENST00000591519 KIF7Q2M1P5 1343 aa14.17□□□□□ -0.14
VPS4B-207ENST00000591519 KDM6AO15550 1401 aaPredicted RBP14.17□□□□□ -0.14
VPS4B-207ENST00000591519 CABP4P57796 275 aa14.17□□□□□ -0.14
VPS4B-207ENST00000591519 TRAPPC3LQ5T215 181 aa14.17□□□□□ -0.14
VPS4B-207ENST00000591519 FBXO3Q9UK99 471 aa14.17□□□□□ -0.14
VPS4B-207ENST00000591519 RTCBQ9Y3I0 505 aaKnown RBP14.17□□□□□ -0.14
VPS4B-207ENST00000591519 RPS6KA4O75676 772 aa14.16□□□□□ -0.14
VPS4B-207ENST00000591519 C1QTNF8P60827 252 aa14.16□□□□□ -0.14
VPS4B-207ENST00000591519 C1orf141Q5JVX7 400 aa14.16□□□□□ -0.14
VPS4B-207ENST00000591519 DCAF8Q5TAQ9 597 aa14.16□□□□□ -0.14
VPS4B-207ENST00000591519 NLGN1Q8N2Q7 840 aa14.16□□□□□ -0.14
VPS4B-207ENST00000591519 NFATC2IPQ8NCF5 419 aa14.16□□□□□ -0.14
VPS4B-207ENST00000591519 CNTNAP4Q9C0A0 1308 aa14.15□□□□□ -0.14
VPS4B-207ENST00000591519 PYGBP11216 843 aa14.15□□□□□ -0.14
VPS4B-207ENST00000591519 POTEGQ6S5H5 508 aa14.15□□□□□ -0.14
VPS4B-207ENST00000591519 ARHGEF1Q92888 912 aaKnown RBP14.15□□□□□ -0.14
VPS4B-207ENST00000591519 TMEM106CQ9BVX2 250 aa14.15□□□□□ -0.14
VPS4B-207ENST00000591519 MMP10P09238 476 aa14.13□□□□□ -0.15
VPS4B-207ENST00000591519 AKAP4Q5JQC9 854 aa14.13□□□□□ -0.15
VPS4B-207ENST00000591519 TGFB2P61812 414 aa14.12□□□□□ -0.15
VPS4B-207ENST00000591519 COL5A3P25940 1745 aaPredicted RBP14.12□□□□□ -0.15
VPS4B-207ENST00000591519 MYH14Q7Z406 1995 aaKnown RBP14.11□□□□□ -0.15
VPS4B-207ENST00000591519 PTCD1O75127 700 aaKnown RBP14.11□□□□□ -0.15
VPS4B-207ENST00000591519 GYS1P13807 737 aa14.11□□□□□ -0.15
VPS4B-207ENST00000591519 RFC4P35249 363 aa14.11□□□□□ -0.15
VPS4B-207ENST00000591519 NPC1L1Q9UHC9 1359 aa14.1□□□□□ -0.15
VPS4B-207ENST00000591519 SCN11AQ9UI33 1791 aa14.1□□□□□ -0.15
VPS4B-207ENST00000591519 GIGYF1O75420 1035 aaPredicted RBP14.1□□□□□ -0.15
VPS4B-207ENST00000591519 SLC52A2Q9HAB3 445 aa14.1□□□□□ -0.15
VPS4B-207ENST00000591519 LGR6Q9HBX8 967 aa14.1□□□□□ -0.15
VPS4B-207ENST00000591519 KIF13BQ9NQT8 1826 aa14.1□□□□□ -0.15
VPS4B-207ENST00000591519 DIAPH1O60610 1272 aaKnown RBP14.09□□□□□ -0.15
VPS4B-207ENST00000591519 CRKLP46109 303 aaKnown RBP14.09□□□□□ -0.15
VPS4B-207ENST00000591519 VASPP50552 380 aaPredicted RBP14.09□□□□□ -0.15
VPS4B-207ENST00000591519 IER5LQ5T953 404 aa14.09□□□□□ -0.15
VPS4B-207ENST00000591519 RNMTO43148 476 aaKnown RBP14.08□□□□□ -0.16
VPS4B-207ENST00000591519 CC2D1BQ5T0F9 858 aaKnown RBP14.08□□□□□ -0.16
VPS4B-207ENST00000591519 INTS5Q6P9B9 1019 aaKnown RBP14.08□□□□□ -0.16
VPS4B-207ENST00000591519 ADCY9O60503 1353 aa14.08□□□□□ -0.16
VPS4B-207ENST00000591519 CICQ96RK0 1608 aaPredicted RBP14.08□□□□□ -0.16
VPS4B-207ENST00000591519 HMOX1P09601 288 aa14.07□□□□□ -0.16
VPS4B-207ENST00000591519 MTHFSDQ2M296 383 aaKnown RBP14.07□□□□□ -0.16
VPS4B-207ENST00000591519 LCE2DQ5TA82 110 aaPredicted RBP14.07□□□□□ -0.16
VPS4B-207ENST00000591519 CCDC87Q9NVE4 849 aa14.07□□□□□ -0.16
VPS4B-207ENST00000591519 ATP10DQ9P241 1426 aa14.07□□□□□ -0.16
VPS4B-207ENST00000591519 PXDNLA1KZ92 1463 aa14.06□□□□□ -0.16
VPS4B-207ENST00000591519 FAM163AQ96GL9 167 aaPredicted RBP14.06□□□□□ -0.16
VPS4B-207ENST00000591519 PCDHB8Q9UN66 801 aa14.06□□□□□ -0.16
VPS4B-207ENST00000591519 PARP3Q9Y6F1 533 aa14.06□□□□□ -0.16
VPS4B-207ENST00000591519 USP42Q9H9J4 1324 aaKnown RBP14.06□□□□□ -0.16
VPS4B-207ENST00000591519 C10orf71Q711Q0 1435 aa14.06□□□□□ -0.16
VPS4B-207ENST00000591519 SENP3-EIF4A1A0A087X0R7 540 aa14.05□□□□□ -0.16
VPS4B-207ENST00000591519 A0A0G2JLW4 131 aa14.05□□□□□ -0.16
VPS4B-207ENST00000591519 TM4SF1P30408 202 aa14.05□□□□□ -0.16
VPS4B-207ENST00000591519 DNAJC10Q8IXB1 793 aa14.05□□□□□ -0.16
VPS4B-207ENST00000591519 VSIG10Q8N0Z9 540 aa14.05□□□□□ -0.16
VPS4B-207ENST00000591519 MRC1P22897 1456 aa14.05□□□□□ -0.16
VPS4B-207ENST00000591519 ADAMTS7Q9UKP4 1686 aa14.04□□□□□ -0.16
VPS4B-207ENST00000591519 C4AP0C0L4 1744 aa14.04□□□□□ -0.16
VPS4B-207ENST00000591519 TJP1Q07157 1748 aa14.04□□□□□ -0.16
VPS4B-207ENST00000591519 KIAA1551Q9HCM1 1747 aa14.04□□□□□ -0.16
VPS4B-207ENST00000591519 CYP19A1P11511 503 aaPredicted RBP14.04□□□□□ -0.16
VPS4B-207ENST00000591519 KCNA3P22001 575 aa14.04□□□□□ -0.16
VPS4B-207ENST00000591519 GPBP1L1Q9HC44 474 aaPredicted RBP14.04□□□□□ -0.16
VPS4B-207ENST00000591519 WWC3Q9ULE0 1092 aa14.04□□□□□ -0.16
VPS4B-207ENST00000591519 DPEP1P16444 411 aa14.03□□□□□ -0.16
VPS4B-207ENST00000591519 SLC39A6Q13433 755 aa14.03□□□□□ -0.16
VPS4B-207ENST00000591519 SRP68Q9UHB9 627 aaKnown RBP14.03□□□□□ -0.16
VPS4B-207ENST00000591519 N4BP2Q86UW6 1770 aaPredicted RBP14.02□□□□□ -0.16
VPS4B-207ENST00000591519 SOS1Q07889 1333 aaPredicted RBP14.02□□□□□ -0.17
VPS4B-207ENST00000591519 DDR1Q08345 913 aa14.02□□□□□ -0.17
VPS4B-207ENST00000591519 COL3A1P02461 1466 aaPredicted RBP14.01□□□□□ -0.17
VPS4B-207ENST00000591519 ZPR1O75312 459 aa14.01□□□□□ -0.17
VPS4B-207ENST00000591519 IL17REQ8NFR9 667 aa14.01□□□□□ -0.17
VPS4B-207ENST00000591519 NARFQ9UHQ1 456 aa14.01□□□□□ -0.17
VPS4B-207ENST00000591519 BCS1LQ9Y276 419 aa14.01□□□□□ -0.17
VPS4B-207ENST00000591519 KCPQ6ZWJ8 1503 aa14□□□□□ -0.17
VPS4B-207ENST00000591519 VIRMAQ69YN4 1812 aaKnown RBP14□□□□□ -0.17
VPS4B-207ENST00000591519 POLRMTO00411 1230 aaKnown RBP14□□□□□ -0.17
VPS4B-207ENST00000591519 USPL1Q5W0Q7 1092 aa14□□□□□ -0.17
VPS4B-207ENST00000591519 GAS2L2Q8NHY3 880 aa14□□□□□ -0.17
VPS4B-207ENST00000591519 PIM2Q9P1W9 311 aa14□□□□□ -0.17
VPS4B-207ENST00000591519 BRCA1P38398 1863 aaKnown RBP13.99□□□□□ -0.17
VPS4B-207ENST00000591519 GNAT3A8MTJ3 354 aa13.99□□□□□ -0.17
VPS4B-207ENST00000591519 FCHSD2O94868 740 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms