RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 TNS4Q8IZW8 715 aa30.94■■■□□ 2.54
LSM7-206ENST00000591515 DLEC1Q9Y238 1755 aa30.93■■■□□ 2.54
LSM7-206ENST00000591515 CRKLP46109 303 aaKnown RBP30.92■■■□□ 2.54
LSM7-206ENST00000591515 TIAM2Q8IVF5 1701 aa30.92■■■□□ 2.54
LSM7-206ENST00000591515 MYBBP1AQ9BQG0 1328 aaKnown RBP30.92■■■□□ 2.54
LSM7-206ENST00000591515 SMC1BQ8NDV3 1235 aa30.91■■■□□ 2.54
LSM7-206ENST00000591515 NUDCQ9Y266 331 aa30.91■■■□□ 2.54
LSM7-206ENST00000591515 SCN11AQ9UI33 1791 aa30.9■■■□□ 2.54
LSM7-206ENST00000591515 PTCD1O75127 700 aaKnown RBP30.9■■■□□ 2.54
LSM7-206ENST00000591515 IL13P35225 146 aa30.9■■■□□ 2.54
LSM7-206ENST00000591515 CABP4P57796 275 aa30.9■■■□□ 2.54
LSM7-206ENST00000591515 PRELPP51888 382 aa30.89■■■□□ 2.54
LSM7-206ENST00000591515 ZNF530Q6P9A1 599 aaPredicted RBP30.89■■■□□ 2.54
LSM7-206ENST00000591515 PRKRIP1Q9H875 184 aaPredicted RBP30.89■■■□□ 2.54
LSM7-206ENST00000591515 NRXN2Q9P2S2 1712 aa30.87■■■□□ 2.53
LSM7-206ENST00000591515 POLRMTO00411 1230 aaKnown RBP30.87■■■□□ 2.53
LSM7-206ENST00000591515 ANP32CO43423 234 aa30.87■■■□□ 2.53
LSM7-206ENST00000591515 RASSF7Q02833 373 aa30.87■■■□□ 2.53
LSM7-206ENST00000591515 PLEKHO1Q53GL0 409 aaPredicted RBP30.87■■■□□ 2.53
LSM7-206ENST00000591515 ZC3H4Q9UPT8 1303 aaKnown RBP30.85■■■□□ 2.53
LSM7-206ENST00000591515 VIRMAQ69YN4 1812 aaKnown RBP30.84■■■□□ 2.53
LSM7-206ENST00000591515 COL3A1P02461 1466 aaPredicted RBP30.84■■■□□ 2.53
LSM7-206ENST00000591515 TM4SF1P30408 202 aa30.84■■■□□ 2.53
LSM7-206ENST00000591515 U2SURPO15042 1029 aaKnown RBP30.82■■■□□ 2.52
LSM7-206ENST00000591515 INTS5Q6P9B9 1019 aaKnown RBP30.82■■■□□ 2.52
LSM7-206ENST00000591515 HSPA1AP0DMV8 641 aaKnown RBP30.81■■■□□ 2.52
LSM7-206ENST00000591515 HSPA1BP0DMV9 641 aaKnown RBP30.81■■■□□ 2.52
LSM7-206ENST00000591515 AMOTQ4VCS5 1084 aa30.81■■■□□ 2.52
LSM7-206ENST00000591515 SULT6B1Q6IMI4 303 aa30.81■■■□□ 2.52
LSM7-206ENST00000591515 NFATC2IPQ8NCF5 419 aa30.81■■■□□ 2.52
LSM7-206ENST00000591515 USPL1Q5W0Q7 1092 aa30.78■■■□□ 2.52
LSM7-206ENST00000591515 AEBP1Q8IUX7 1158 aa30.78■■■□□ 2.52
LSM7-206ENST00000591515 DICER1Q9UPY3 1922 aaKnown RBP30.77■■■□□ 2.52
LSM7-206ENST00000591515 GLTPD2A6NH11 291 aa30.77■■■□□ 2.52
LSM7-206ENST00000591515 VEGFAP15692 232 aaPredicted RBP30.77■■■□□ 2.52
LSM7-206ENST00000591515 LMNB1P20700 586 aa30.77■■■□□ 2.52
LSM7-206ENST00000591515 C1orf141Q5JVX7 400 aa30.77■■■□□ 2.52
LSM7-206ENST00000591515 SOS1Q07889 1333 aaPredicted RBP30.75■■■□□ 2.51
LSM7-206ENST00000591515 ZPR1O75312 459 aa30.74■■■□□ 2.51
LSM7-206ENST00000591515 DNAJC10Q8IXB1 793 aa30.74■■■□□ 2.51
LSM7-206ENST00000591515 U2AF1L5P0DN76 240 aaPredicted RBP30.73■■■□□ 2.51
LSM7-206ENST00000591515 U2AF1Q01081 240 aaKnown RBP eCLIP30.73■■■□□ 2.51
LSM7-206ENST00000591515 ANKRD31Q8N7Z5 1873 aa30.72■■■□□ 2.51
LSM7-206ENST00000591515 HMOX1P09601 288 aa30.72■■■□□ 2.51
LSM7-206ENST00000591515 NFIXQ14938 502 aa30.72■■■□□ 2.51
LSM7-206ENST00000591515 FER1L6Q2WGJ9 1857 aa30.7■■■□□ 2.51
LSM7-206ENST00000591515 PNNQ9H307 717 aaKnown RBP30.7■■■□□ 2.51
LSM7-206ENST00000591515 COL15A1P39059 1388 aa30.69■■■□□ 2.5
LSM7-206ENST00000591515 CARMIL3Q8ND23 1372 aa30.69■■■□□ 2.5
LSM7-206ENST00000591515 POTECB2RU33 542 aa30.69■■■□□ 2.5
LSM7-206ENST00000591515 NFKBIEO00221 500 aa30.69■■■□□ 2.5
LSM7-206ENST00000591515 NEFMP07197 916 aa30.69■■■□□ 2.5
LSM7-206ENST00000591515 TTLL6Q8N841 843 aa30.68■■■□□ 2.5
LSM7-206ENST00000591515 BCL2L12Q9HB09 334 aa30.68■■■□□ 2.5
LSM7-206ENST00000591515 NARFQ9UHQ1 456 aa30.68■■■□□ 2.5
LSM7-206ENST00000591515 MRC1P22897 1456 aa30.68■■■□□ 2.5
LSM7-206ENST00000591515 COL11A2P13942 1736 aaPredicted RBP30.67■■■□□ 2.5
LSM7-206ENST00000591515 CYP19A1P11511 503 aaPredicted RBP30.67■■■□□ 2.5
LSM7-206ENST00000591515 SERPINB2P05120 415 aa30.65■■■□□ 2.5
LSM7-206ENST00000591515 WDR43Q15061 677 aaKnown RBP eCLIP30.65■■■□□ 2.5
LSM7-206ENST00000591515 UBR2Q8IWV8 1755 aa30.64■■■□□ 2.5
LSM7-206ENST00000591515 C2CD5Q86YS7 1000 aa30.64■■■□□ 2.5
LSM7-206ENST00000591515 ZBTB1Q9Y2K1 713 aa30.64■■■□□ 2.5
LSM7-206ENST00000591515 CACNA1SQ13698 1873 aa30.63■■■□□ 2.49
LSM7-206ENST00000591515 SLC52A2Q9HAB3 445 aa30.63■■■□□ 2.49
LSM7-206ENST00000591515 PRKAR2BP31323 418 aa30.61■■■□□ 2.49
LSM7-206ENST00000591515 SLC39A6Q13433 755 aa30.61■■■□□ 2.49
LSM7-206ENST00000591515 RSPH6AQ9H0K4 717 aa30.61■■■□□ 2.49
LSM7-206ENST00000591515 AKAP4Q5JQC9 854 aa30.6■■■□□ 2.49
LSM7-206ENST00000591515 GAS2L2Q8NHY3 880 aa30.6■■■□□ 2.49
LSM7-206ENST00000591515 LGR6Q9HBX8 967 aa30.6■■■□□ 2.49
LSM7-206ENST00000591515 SCN7AQ01118 1682 aa30.59■■■□□ 2.49
LSM7-206ENST00000591515 H0YIN7 160 aa30.59■■■□□ 2.49
LSM7-206ENST00000591515 DPY19L2Q6NUT2 758 aa30.56■■■□□ 2.48
LSM7-206ENST00000591515 MAPK8IP3Q9UPT6 1336 aa30.55■■■□□ 2.48
LSM7-206ENST00000591515 CREBZFQ9NS37 354 aa30.55■■■□□ 2.48
LSM7-206ENST00000591515 MKRN1Q9UHC7 482 aaKnown RBP30.55■■■□□ 2.48
LSM7-206ENST00000591515 ARFGEF2Q9Y6D5 1785 aa30.55■■■□□ 2.48
LSM7-206ENST00000591515 RNMTO43148 476 aaKnown RBP30.54■■■□□ 2.48
LSM7-206ENST00000591515 DIEXFQ68CQ4 756 aaKnown RBP30.54■■■□□ 2.48
LSM7-206ENST00000591515 MRS2Q9HD23 443 aa30.54■■■□□ 2.48
LSM7-206ENST00000591515 SLX4Q8IY92 1834 aa30.54■■■□□ 2.48
LSM7-206ENST00000591515 ERFEQ4G0M1 354 aa30.53■■■□□ 2.48
LSM7-206ENST00000591515 BICDL1Q6ZP65 573 aa30.53■■■□□ 2.48
LSM7-206ENST00000591515 POTEIP0CG38 1075 aa30.52■■■□□ 2.48
LSM7-206ENST00000591515 POTEJP0CG39 1038 aa30.52■■■□□ 2.48
LSM7-206ENST00000591515 MTHFSDQ2M296 383 aaKnown RBP30.52■■■□□ 2.48
LSM7-206ENST00000591515 CHADLQ6NUI6 762 aa30.52■■■□□ 2.48
LSM7-206ENST00000591515 ZNF219Q9P2Y4 722 aaPredicted RBP30.52■■■□□ 2.48
LSM7-206ENST00000591515 C21orf2O43822 256 aa30.51■■■□□ 2.47
LSM7-206ENST00000591515 CANXP27824 592 aaKnown RBP30.51■■■□□ 2.47
LSM7-206ENST00000591515 ZNF622Q969S3 477 aaKnown RBP eCLIP30.51■■■□□ 2.47
LSM7-206ENST00000591515 VSIG10Q8N0Z9 540 aa30.5■■■□□ 2.47
LSM7-206ENST00000591515 SCN4AP35499 1836 aa30.5■■■□□ 2.47
LSM7-206ENST00000591515 FOXN1O15353 648 aa30.48■■■□□ 2.47
LSM7-206ENST00000591515 EIF5P55010 431 aaKnown RBP30.48■■■□□ 2.47
LSM7-206ENST00000591515 TBC1D9BQ66K14 1250 aa30.48■■■□□ 2.47
LSM7-206ENST00000591515 CNTNAP1P78357 1384 aa30.47■■■□□ 2.47
LSM7-206ENST00000591515 LTBP3Q9NS15 1303 aa30.47■■■□□ 2.47
LSM7-206ENST00000591515 GNAT3A8MTJ3 354 aa30.46■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms