RNA–Protein interactions for RNA: ENST00000591470.5

GCDH-216, Transcript of glutaryl-CoA dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCDH, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-216ENST00000591470 BRINP3Q76B58 766 aa23.24■■□□□ 1.31
GCDH-216ENST00000591470 BCL11AQ9H165 835 aa23.23■■□□□ 1.31
GCDH-216ENST00000591470 SLC52A2Q9HAB3 445 aa23.23■■□□□ 1.31
GCDH-216ENST00000591470 CASC1Q6TDU7 716 aa23.22■■□□□ 1.31
GCDH-216ENST00000591470 C5P01031 1676 aa23.22■■□□□ 1.31
GCDH-216ENST00000591470 NBPF7P0C2Y1 421 aaPredicted RBP23.21■■□□□ 1.31
GCDH-216ENST00000591470 CSB-PGBD3P0DP91 1061 aa23.21■■□□□ 1.31
GCDH-216ENST00000591470 CHRNA2Q15822 529 aa23.21■■□□□ 1.31
GCDH-216ENST00000591470 PROSER3Q2NL68 480 aa23.21■■□□□ 1.31
GCDH-216ENST00000591470 IFNL2Q8IZJ0 200 aa23.21■■□□□ 1.31
GCDH-216ENST00000591470 HYPKQ9NX55 129 aa23.21■■□□□ 1.31
GCDH-216ENST00000591470 STAP2Q9UGK3 403 aa23.21■■□□□ 1.31
GCDH-216ENST00000591470 PRAMEF22A3QJZ6 481 aa23.2■■□□□ 1.3
GCDH-216ENST00000591470 RAB11FIP3O75154 756 aa23.2■■□□□ 1.3
GCDH-216ENST00000591470 ALDH1L1O75891 902 aa23.2■■□□□ 1.3
GCDH-216ENST00000591470 ZNF790Q6PG37 636 aa23.2■■□□□ 1.3
GCDH-216ENST00000591470 KSR2Q6VAB6 950 aa23.2■■□□□ 1.3
GCDH-216ENST00000591470 PPP1R42Q7Z4L9 355 aa23.2■■□□□ 1.3
GCDH-216ENST00000591470 USP26Q9BXU7 913 aa23.2■■□□□ 1.3
GCDH-216ENST00000591470 MX1P20591 662 aa23.19■■□□□ 1.3
GCDH-216ENST00000591470 PARP4Q9UKK3 1724 aaKnown RBP23.19■■□□□ 1.3
GCDH-216ENST00000591470 AOX1Q06278 1338 aa23.19■■□□□ 1.3
GCDH-216ENST00000591470 DDX21Q9NR30 783 aaKnown RBP eCLIP23.19■■□□□ 1.3
GCDH-216ENST00000591470 CHMP5Q9NZZ3 219 aa23.19■■□□□ 1.3
GCDH-216ENST00000591470 MAP3K2Q9Y2U5 619 aa23.18■■□□□ 1.3
GCDH-216ENST00000591470 DDIT3P35638 169 aa23.17■■□□□ 1.3
GCDH-216ENST00000591470 SOS2Q07890 1332 aaPredicted RBP23.17■■□□□ 1.3
GCDH-216ENST00000591470 PDIA6Q15084 440 aa23.17■■□□□ 1.3
GCDH-216ENST00000591470 SPRYD3Q8NCJ5 442 aa23.17■■□□□ 1.3
GCDH-216ENST00000591470 DCAF5Q96JK2 942 aa23.17■■□□□ 1.3
GCDH-216ENST00000591470 MTX1Q13505 466 aa23.16■■□□□ 1.3
GCDH-216ENST00000591470 CYP27B1O15528 508 aa23.15■■□□□ 1.3
GCDH-216ENST00000591470 SRGAP3O43295 1099 aa23.15■■□□□ 1.3
GCDH-216ENST00000591470 SLC39A6Q13433 755 aa23.15■■□□□ 1.3
GCDH-216ENST00000591470 NFATC2IPQ8NCF5 419 aa23.15■■□□□ 1.3
GCDH-216ENST00000591470 ABCA3Q99758 1704 aa23.15■■□□□ 1.3
GCDH-216ENST00000591470 ERC2O15083 957 aa23.14■■□□□ 1.29
GCDH-216ENST00000591470 SURF6O75683 361 aaKnown RBP23.14■■□□□ 1.29
GCDH-216ENST00000591470 REC8O95072 547 aa23.14■■□□□ 1.29
GCDH-216ENST00000591470 HSP90AB1P08238 724 aaKnown RBP23.14■■□□□ 1.29
GCDH-216ENST00000591470 RABEP1Q15276 862 aa23.14■■□□□ 1.29
GCDH-216ENST00000591470 CD2BP2O95400 341 aaKnown RBP23.13■■□□□ 1.29
GCDH-216ENST00000591470 DDX58O95786 925 aaKnown RBP23.13■■□□□ 1.29
GCDH-216ENST00000591470 GSE1Q14687 1217 aa23.13■■□□□ 1.29
GCDH-216ENST00000591470 RBM42Q9BTD8 480 aaKnown RBP23.13■■□□□ 1.29
GCDH-216ENST00000591470 K7ELQ4 463 aaPredicted RBP23.13■■□□□ 1.29
GCDH-216ENST00000591470 RHPN1Q8TCX5 695 aa23.13■■□□□ 1.29
GCDH-216ENST00000591470 SLAIN2Q9P270 581 aa23.13■■□□□ 1.29
GCDH-216ENST00000591470 HDAC5Q9UQL6 1122 aa23.13■■□□□ 1.29
GCDH-216ENST00000591470 UTYO14607 1347 aa23.12■■□□□ 1.29
GCDH-216ENST00000591470 TSHZ3Q63HK5 1081 aa23.12■■□□□ 1.29
GCDH-216ENST00000591470 LINS1Q8NG48 757 aa23.12■■□□□ 1.29
GCDH-216ENST00000591470 KIF1BPQ96EK5 621 aa23.12■■□□□ 1.29
GCDH-216ENST00000591470 ZNF335Q9H4Z2 1342 aaPredicted RBP23.12■■□□□ 1.29
GCDH-216ENST00000591470 HSP90AB4PQ58FF6 505 aa23.11■■□□□ 1.29
GCDH-216ENST00000591470 WDR17Q8IZU2 1322 aa23.11■■□□□ 1.29
GCDH-216ENST00000591470 GLI3P10071 1580 aa23.11■■□□□ 1.29
GCDH-216ENST00000591470 ZNF496Q96IT1 587 aaPredicted RBP23.1■■□□□ 1.29
GCDH-216ENST00000591470 IL1RAPL2Q9NP60 686 aa23.1■■□□□ 1.29
GCDH-216ENST00000591470 C9orf78Q9NZ63 289 aaPredicted RBP23.1■■□□□ 1.29
GCDH-216ENST00000591470 CIZ1Q9ULV3 898 aaPredicted RBP23.1■■□□□ 1.29
GCDH-216ENST00000591470 COL5A2P05997 1499 aaPredicted RBP23.09■■□□□ 1.29
GCDH-216ENST00000591470 LAMB4A4D0S4 1761 aa23.09■■□□□ 1.29
GCDH-216ENST00000591470 CWF19L2Q2TBE0 894 aaKnown RBP23.09■■□□□ 1.29
GCDH-216ENST00000591470 PRDM11Q9NQV5 511 aa23.09■■□□□ 1.29
GCDH-216ENST00000591470 SNRPA1P09661 255 aaKnown RBP23.08■■□□□ 1.29
GCDH-216ENST00000591470 ESYT1Q9BSJ8 1104 aa23.08■■□□□ 1.29
GCDH-216ENST00000591470 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.28
GCDH-216ENST00000591470 GRM8O00222 908 aa23.07■■□□□ 1.28
GCDH-216ENST00000591470 CHMLP26374 656 aa23.07■■□□□ 1.28
GCDH-216ENST00000591470 LARP1Q6PKG0 1096 aaKnown RBP23.07■■□□□ 1.28
GCDH-216ENST00000591470 LRP10Q7Z4F1 713 aa23.07■■□□□ 1.28
GCDH-216ENST00000591470 TTC5Q8N0Z6 440 aa23.07■■□□□ 1.28
GCDH-216ENST00000591470 FMNL2Q96PY5 1086 aa23.07■■□□□ 1.28
GCDH-216ENST00000591470 USP42Q9H9J4 1324 aaKnown RBP23.07■■□□□ 1.28
GCDH-216ENST00000591470 NUTM1Q86Y26 1132 aa23.06■■□□□ 1.28
GCDH-216ENST00000591470 PI4K2BQ8TCG2 481 aa23.06■■□□□ 1.28
GCDH-216ENST00000591470 CABP4P57796 275 aa23.05■■□□□ 1.28
GCDH-216ENST00000591470 AIMP1Q12904 312 aaKnown RBP23.05■■□□□ 1.28
GCDH-216ENST00000591470 PCDH11XQ9BZA7 1347 aa23.05■■□□□ 1.28
GCDH-216ENST00000591470 PCDH11YQ9BZA8 1340 aa23.05■■□□□ 1.28
GCDH-216ENST00000591470 TRIM6-TRIM34B2RNG4 842 aa23.05■■□□□ 1.28
GCDH-216ENST00000591470 IGKV5-2P06315 115 aa23.05■■□□□ 1.28
GCDH-216ENST00000591470 MCM4P33991 863 aa23.05■■□□□ 1.28
GCDH-216ENST00000591470 RIC3Q7Z5B4 369 aa23.04■■□□□ 1.28
GCDH-216ENST00000591470 UNC5CLQ8IV45 518 aa23.04■■□□□ 1.28
GCDH-216ENST00000591470 XAGE3Q8WTP9 111 aa23.04■■□□□ 1.28
GCDH-216ENST00000591470 RILPL2Q969X0 211 aa23.04■■□□□ 1.28
GCDH-216ENST00000591470 KAZALD1Q96I82 304 aa23.04■■□□□ 1.28
GCDH-216ENST00000591470 USP16Q9Y5T5 823 aa23.04■■□□□ 1.28
GCDH-216ENST00000591470 TOM1L2Q6ZVM7 507 aa23.03■■□□□ 1.28
GCDH-216ENST00000591470 SUCLG2Q96I99 432 aa23.03■■□□□ 1.28
GCDH-216ENST00000591470 UBR2Q8IWV8 1755 aa23.03■■□□□ 1.28
GCDH-216ENST00000591470 AK9Q5TCS8 1911 aa23.03■■□□□ 1.28
GCDH-216ENST00000591470 MYL6BP14649 208 aa23.02■■□□□ 1.28
GCDH-216ENST00000591470 COPS6Q7L5N1 327 aa23.02■■□□□ 1.28
GCDH-216ENST00000591470 ZCRB1Q8TBF4 217 aaKnown RBP23.02■■□□□ 1.28
GCDH-216ENST00000591470 METTL22Q9BUU2 404 aaPredicted RBP23.02■■□□□ 1.28
GCDH-216ENST00000591470 SHANK3Q9BYB0 1731 aa23.02■■□□□ 1.28
GCDH-216ENST00000591470 PAPPAQ13219 1627 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms