RNA–Protein interactions for RNA: ENST00000591050.1

GCDH-215, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 3

Gene GCDH, Length 423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-215ENST00000591050 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
GCDH-215ENST00000591050 ZNF428Q96B54 188 aa11.81□□□□□ -0.52
GCDH-215ENST00000591050 LOC102724428A0A0B4J2F2 783 aa11.8□□□□□ -0.52
GCDH-215ENST00000591050 HMGB2P26583 209 aaKnown RBP11.8□□□□□ -0.52
GCDH-215ENST00000591050 SSFA2P28290 1259 aa11.8□□□□□ -0.52
GCDH-215ENST00000591050 SIK1P57059 783 aa11.8□□□□□ -0.52
GCDH-215ENST00000591050 DEKP35659 375 aaKnown RBP11.79□□□□□ -0.52
GCDH-215ENST00000591050 ITPK1Q13572 414 aa11.79□□□□□ -0.52
GCDH-215ENST00000591050 ASAP1Q9ULH1 1129 aa11.79□□□□□ -0.52
GCDH-215ENST00000591050 PXDNLA1KZ92 1463 aa11.78□□□□□ -0.52
GCDH-215ENST00000591050 IGHDP01880 384 aa11.78□□□□□ -0.52
GCDH-215ENST00000591050 HSPA6P17066 643 aa11.78□□□□□ -0.52
GCDH-215ENST00000591050 RTL5Q5HYW3 569 aaPredicted RBP11.78□□□□□ -0.52
GCDH-215ENST00000591050 SPG7Q9UQ90 795 aa11.78□□□□□ -0.52
GCDH-215ENST00000591050 SBF1O95248 1867 aa11.78□□□□□ -0.52
GCDH-215ENST00000591050 GNPATO15228 680 aa11.77□□□□□ -0.53
GCDH-215ENST00000591050 TMPOP42166 694 aaKnown RBP11.77□□□□□ -0.53
GCDH-215ENST00000591050 ALDH1L2Q3SY69 923 aa11.77□□□□□ -0.53
GCDH-215ENST00000591050 EYA1Q99502 592 aa11.77□□□□□ -0.53
GCDH-215ENST00000591050 TMOD3Q9NYL9 352 aa11.77□□□□□ -0.53
GCDH-215ENST00000591050 KDRP35968 1356 aa11.77□□□□□ -0.53
GCDH-215ENST00000591050 TJP1Q07157 1748 aa11.77□□□□□ -0.53
GCDH-215ENST00000591050 WDR90Q96KV7 1748 aa11.77□□□□□ -0.53
GCDH-215ENST00000591050 SCN11AQ9UI33 1791 aa11.77□□□□□ -0.53
GCDH-215ENST00000591050 KIF3CO14782 793 aa11.76□□□□□ -0.53
GCDH-215ENST00000591050 FCHSD2O94868 740 aa11.76□□□□□ -0.53
GCDH-215ENST00000591050 PHKG2P15735 406 aa11.76□□□□□ -0.53
GCDH-215ENST00000591050 ATP6V1AP38606 617 aa11.76□□□□□ -0.53
GCDH-215ENST00000591050 ATG3Q9NT62 314 aa11.76□□□□□ -0.53
GCDH-215ENST00000591050 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.76□□□□□ -0.53
GCDH-215ENST00000591050 TRIM35Q9UPQ4 493 aa11.76□□□□□ -0.53
GCDH-215ENST00000591050 MMP10P09238 476 aa11.75□□□□□ -0.53
GCDH-215ENST00000591050 HDAC1Q13547 482 aaPredicted RBP11.75□□□□□ -0.53
GCDH-215ENST00000591050 MVPQ14764 893 aaKnown RBP11.75□□□□□ -0.53
GCDH-215ENST00000591050 ZKSCAN2Q63HK3 967 aa11.75□□□□□ -0.53
GCDH-215ENST00000591050 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
GCDH-215ENST00000591050 BCL11AQ9H165 835 aa11.75□□□□□ -0.53
GCDH-215ENST00000591050 RWDD1Q9H446 243 aaPredicted RBP11.75□□□□□ -0.53
GCDH-215ENST00000591050 C10orf71Q711Q0 1435 aa11.75□□□□□ -0.53
GCDH-215ENST00000591050 ADAMTS7Q9UKP4 1686 aa11.75□□□□□ -0.53
GCDH-215ENST00000591050 CCDC88AQ3V6T2 1871 aa11.74□□□□□ -0.53
GCDH-215ENST00000591050 U2AF1L5P0DN76 240 aaPredicted RBP11.74□□□□□ -0.53
GCDH-215ENST00000591050 U2AF1Q01081 240 aaKnown RBP eCLIP11.74□□□□□ -0.53
GCDH-215ENST00000591050 SLC4A9Q96Q91 983 aa11.74□□□□□ -0.53
GCDH-215ENST00000591050 POLKQ9UBT6 870 aa11.74□□□□□ -0.53
GCDH-215ENST00000591050 COG6Q9Y2V7 657 aa11.74□□□□□ -0.53
GCDH-215ENST00000591050 AFDNP55196 1824 aaKnown RBP11.74□□□□□ -0.53
GCDH-215ENST00000591050 DIAPH1O60610 1272 aaKnown RBP11.73□□□□□ -0.53
GCDH-215ENST00000591050 EIF4A2Q14240 407 aaKnown RBP11.73□□□□□ -0.53
GCDH-215ENST00000591050 NPM2Q86SE8 214 aaKnown RBP11.73□□□□□ -0.53
GCDH-215ENST00000591050 PANK1Q8TE04 598 aa11.73□□□□□ -0.53
GCDH-215ENST00000591050 KDM6AO15550 1401 aaPredicted RBP11.72□□□□□ -0.53
GCDH-215ENST00000591050 KIF16BQ96L93 1317 aa11.72□□□□□ -0.53
GCDH-215ENST00000591050 CANXP27824 592 aaKnown RBP11.72□□□□□ -0.53
GCDH-215ENST00000591050 DZIP1LQ8IYY4 767 aaKnown RBP11.72□□□□□ -0.53
GCDH-215ENST00000591050 DDX19BQ9UMR2 479 aa11.72□□□□□ -0.53
GCDH-215ENST00000591050 PCDHB15Q9Y5E8 787 aa11.72□□□□□ -0.53
GCDH-215ENST00000591050 PLEKHG2Q9H7P9 1386 aa11.71□□□□□ -0.53
GCDH-215ENST00000591050 A0A0G2JLW4 131 aa11.71□□□□□ -0.53
GCDH-215ENST00000591050 RLBP1P12271 317 aa11.71□□□□□ -0.53
GCDH-215ENST00000591050 CALD1Q05682 793 aaKnown RBP11.71□□□□□ -0.53
GCDH-215ENST00000591050 TRAPPC3LQ5T215 181 aa11.71□□□□□ -0.53
GCDH-215ENST00000591050 ARHGAP45Q92619 1136 aa11.71□□□□□ -0.53
GCDH-215ENST00000591050 BCS1LQ9Y276 419 aa11.71□□□□□ -0.53
GCDH-215ENST00000591050 RTCBQ9Y3I0 505 aaKnown RBP11.71□□□□□ -0.53
GCDH-215ENST00000591050 DLEC1Q9Y238 1755 aa11.71□□□□□ -0.54
GCDH-215ENST00000591050 TNRC6CQ9HCJ0 1690 aaKnown RBP11.71□□□□□ -0.54
GCDH-215ENST00000591050 IPO8O15397 1037 aaKnown RBP11.7□□□□□ -0.54
GCDH-215ENST00000591050 GYS1P13807 737 aa11.7□□□□□ -0.54
GCDH-215ENST00000591050 TNNT2P45379 298 aaPredicted RBP11.7□□□□□ -0.54
GCDH-215ENST00000591050 TGFB2P61812 414 aa11.7□□□□□ -0.54
GCDH-215ENST00000591050 NBR1Q14596 966 aa11.7□□□□□ -0.54
GCDH-215ENST00000591050 SKAP1Q86WV1 359 aa11.7□□□□□ -0.54
GCDH-215ENST00000591050 ARHGEF1Q92888 912 aaKnown RBP11.7□□□□□ -0.54
GCDH-215ENST00000591050 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
GCDH-215ENST00000591050 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
GCDH-215ENST00000591050 CHMP4BQ9H444 224 aaKnown RBP11.7□□□□□ -0.54
GCDH-215ENST00000591050 RRP7AQ9Y3A4 280 aaKnown RBP11.7□□□□□ -0.54
GCDH-215ENST00000591050 CNTNAP4Q9C0A0 1308 aa11.69□□□□□ -0.54
GCDH-215ENST00000591050 ERVV-2B6SEH9 535 aa11.69□□□□□ -0.54
GCDH-215ENST00000591050 DPEP1P16444 411 aa11.69□□□□□ -0.54
GCDH-215ENST00000591050 RC3H1Q5TC82 1133 aaKnown RBP11.69□□□□□ -0.54
GCDH-215ENST00000591050 ATF7IPQ6VMQ6 1270 aa11.69□□□□□ -0.54
GCDH-215ENST00000591050 SMC5Q8IY18 1101 aa11.69□□□□□ -0.54
GCDH-215ENST00000591050 NLGN1Q8N2Q7 840 aa11.69□□□□□ -0.54
GCDH-215ENST00000591050 NEFMP07197 916 aa11.68□□□□□ -0.54
GCDH-215ENST00000591050 ZNF853P0CG23 659 aa11.68□□□□□ -0.54
GCDH-215ENST00000591050 ADRA2BP18089 450 aa11.68□□□□□ -0.54
GCDH-215ENST00000591050 KCNA3P22001 575 aa11.68□□□□□ -0.54
GCDH-215ENST00000591050 RGS3P49796 1198 aa11.68□□□□□ -0.54
GCDH-215ENST00000591050 ARHGAP27Q6ZUM4 889 aa11.68□□□□□ -0.54
GCDH-215ENST00000591050 DCAF5Q96JK2 942 aa11.68□□□□□ -0.54
GCDH-215ENST00000591050 NMRK2Q9NPI5 230 aa11.68□□□□□ -0.54
GCDH-215ENST00000591050 CCDC87Q9NVE4 849 aa11.68□□□□□ -0.54
GCDH-215ENST00000591050 PDZRN3Q9UPQ7 1066 aa11.68□□□□□ -0.54
GCDH-215ENST00000591050 NRXN2Q9P2S2 1712 aa11.68□□□□□ -0.54
GCDH-215ENST00000591050 TIAM2Q8IVF5 1701 aa11.67□□□□□ -0.54
GCDH-215ENST00000591050 RPS6KA4O75676 772 aa11.67□□□□□ -0.54
GCDH-215ENST00000591050 TOMM70O94826 608 aa11.67□□□□□ -0.54
GCDH-215ENST00000591050 RFC4P35249 363 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms