RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 FAM196AQ6ZSG2 479 aa23.01■■□□□ 1.27
CTDP1-205ENST00000590599 PELP1Q8IZL8 1130 aaKnown RBP23.01■■□□□ 1.27
CTDP1-205ENST00000590599 MARCH10Q8NA82 808 aaPredicted RBP23.01■■□□□ 1.27
CTDP1-205ENST00000590599 TMEM57Q8N5G2 664 aa23.01■■□□□ 1.27
CTDP1-205ENST00000590599 ABCC4O15439 1325 aa23■■□□□ 1.27
CTDP1-205ENST00000590599 GIGYF1O75420 1035 aaPredicted RBP23■■□□□ 1.27
CTDP1-205ENST00000590599 EIF2S2P20042 333 aaKnown RBP23■■□□□ 1.27
CTDP1-205ENST00000590599 DDX19BQ9UMR2 479 aa23■■□□□ 1.27
CTDP1-205ENST00000590599 PAPPAQ13219 1627 aa22.99■■□□□ 1.27
CTDP1-205ENST00000590599 KAT6BQ8WYB5 2073 aa22.98■■□□□ 1.27
CTDP1-205ENST00000590599 C5P01031 1676 aa22.98■■□□□ 1.27
CTDP1-205ENST00000590599 TMOD3Q9NYL9 352 aa22.97■■□□□ 1.27
CTDP1-205ENST00000590599 EZH2Q15910 746 aaKnown RBP22.96■■□□□ 1.27
CTDP1-205ENST00000590599 G2E3Q7L622 706 aa22.96■■□□□ 1.27
CTDP1-205ENST00000590599 FMNL2Q96PY5 1086 aa22.96■■□□□ 1.27
CTDP1-205ENST00000590599 UBR2Q8IWV8 1755 aa22.96■■□□□ 1.27
CTDP1-205ENST00000590599 BAG6P46379 1132 aa22.96■■□□□ 1.27
CTDP1-205ENST00000590599 ZNF496Q96IT1 587 aaPredicted RBP22.96■■□□□ 1.27
CTDP1-205ENST00000590599 ITGB4P16144 1822 aa22.95■■□□□ 1.27
CTDP1-205ENST00000590599 APBA3O96018 575 aa22.95■■□□□ 1.26
CTDP1-205ENST00000590599 FLIIQ13045 1269 aa22.95■■□□□ 1.26
CTDP1-205ENST00000590599 CHPF2Q9P2E5 772 aa22.95■■□□□ 1.26
CTDP1-205ENST00000590599 CHMP4BQ9H444 224 aaKnown RBP22.94■■□□□ 1.26
CTDP1-205ENST00000590599 DOT1LQ8TEK3 1739 aa22.93■■□□□ 1.26
CTDP1-205ENST00000590599 LAMB4A4D0S4 1761 aa22.93■■□□□ 1.26
CTDP1-205ENST00000590599 PRAMEF22A3QJZ6 481 aa22.93■■□□□ 1.26
CTDP1-205ENST00000590599 SNRPA1P09661 255 aaKnown RBP22.93■■□□□ 1.26
CTDP1-205ENST00000590599 DBF4Q9UBU7 674 aaPredicted RBP22.93■■□□□ 1.26
CTDP1-205ENST00000590599 FKBP5Q13451 457 aaPredicted RBP22.92■■□□□ 1.26
CTDP1-205ENST00000590599 KCPQ6ZWJ8 1503 aa22.91■■□□□ 1.26
CTDP1-205ENST00000590599 INTS3Q68E01 1043 aaKnown RBP22.9■■□□□ 1.26
CTDP1-205ENST00000590599 CAMKK2Q96RR4 588 aa22.9■■□□□ 1.26
CTDP1-205ENST00000590599 PSDA5PKW4 1024 aaPredicted RBP22.89■■□□□ 1.26
CTDP1-205ENST00000590599 KCNQ2O43526 872 aa22.89■■□□□ 1.26
CTDP1-205ENST00000590599 RREB1Q92766 1687 aa22.89■■□□□ 1.25
CTDP1-205ENST00000590599 CENPQQ7L2Z9 268 aaPredicted RBP22.89■■□□□ 1.25
CTDP1-205ENST00000590599 PIGBQ92521 554 aa22.89■■□□□ 1.25
CTDP1-205ENST00000590599 ACSBG1Q96GR2 724 aa22.89■■□□□ 1.25
CTDP1-205ENST00000590599 PHAXQ9H814 394 aaKnown RBP22.89■■□□□ 1.25
CTDP1-205ENST00000590599 BCL9O00512 1426 aa22.88■■□□□ 1.25
CTDP1-205ENST00000590599 ZBTB40Q9NUA8 1239 aa22.88■■□□□ 1.25
CTDP1-205ENST00000590599 NUP188Q5SRE5 1749 aa22.88■■□□□ 1.25
CTDP1-205ENST00000590599 KDM2BQ8NHM5 1336 aa22.87■■□□□ 1.25
CTDP1-205ENST00000590599 F6X3S4 739 aa22.87■■□□□ 1.25
CTDP1-205ENST00000590599 SLC4A10Q6U841 1118 aa22.87■■□□□ 1.25
CTDP1-205ENST00000590599 SYTL4Q96C24 671 aaPredicted RBP22.87■■□□□ 1.25
CTDP1-205ENST00000590599 HYPKQ9NX55 129 aa22.87■■□□□ 1.25
CTDP1-205ENST00000590599 PXDNLA1KZ92 1463 aa22.87■■□□□ 1.25
CTDP1-205ENST00000590599 N4BP2Q86UW6 1770 aaPredicted RBP22.87■■□□□ 1.25
CTDP1-205ENST00000590599 ANXA1P04083 346 aa22.86■■□□□ 1.25
CTDP1-205ENST00000590599 CCT4P50991 539 aaKnown RBP22.86■■□□□ 1.25
CTDP1-205ENST00000590599 DDX21Q9NR30 783 aaKnown RBP eCLIP22.86■■□□□ 1.25
CTDP1-205ENST00000590599 ZBTB7BO15156 539 aaPredicted RBP22.86■■□□□ 1.25
CTDP1-205ENST00000590599 PTCD1O75127 700 aaKnown RBP22.86■■□□□ 1.25
CTDP1-205ENST00000590599 PCDHB15Q9Y5E8 787 aa22.86■■□□□ 1.25
CTDP1-205ENST00000590599 PROSER3Q2NL68 480 aa22.85■■□□□ 1.25
CTDP1-205ENST00000590599 USP16Q9Y5T5 823 aa22.84■■□□□ 1.25
CTDP1-205ENST00000590599 NHSQ6T4R5 1651 aa22.84■■□□□ 1.25
CTDP1-205ENST00000590599 PRIM1P49642 420 aaKnown RBP22.84■■□□□ 1.25
CTDP1-205ENST00000590599 ASAP1Q9ULH1 1129 aa22.84■■□□□ 1.25
CTDP1-205ENST00000590599 BTAF1O14981 1849 aa22.83■■□□□ 1.25
CTDP1-205ENST00000590599 ATG3Q9NT62 314 aa22.83■■□□□ 1.24
CTDP1-205ENST00000590599 PDIA6Q15084 440 aa22.81■■□□□ 1.24
CTDP1-205ENST00000590599 BCL11BQ9C0K0 894 aaPredicted RBP22.81■■□□□ 1.24
CTDP1-205ENST00000590599 IGHDP01880 384 aa22.81■■□□□ 1.24
CTDP1-205ENST00000590599 R3HDM1Q15032 1099 aaKnown RBP22.81■■□□□ 1.24
CTDP1-205ENST00000590599 RWDD1Q9H446 243 aaPredicted RBP22.81■■□□□ 1.24
CTDP1-205ENST00000590599 ERBB4Q15303 1308 aa22.8■■□□□ 1.24
CTDP1-205ENST00000590599 MYL6BP14649 208 aa22.8■■□□□ 1.24
CTDP1-205ENST00000590599 PI4KAP2A4QPH2 592 aa22.79■■□□□ 1.24
CTDP1-205ENST00000590599 DDX58O95786 925 aaKnown RBP22.79■■□□□ 1.24
CTDP1-205ENST00000590599 VSIG10Q8N0Z9 540 aa22.79■■□□□ 1.24
CTDP1-205ENST00000590599 PROM2Q8N271 834 aa22.79■■□□□ 1.24
CTDP1-205ENST00000590599 PI4KAP1Q8N8J0 262 aa22.79■■□□□ 1.24
CTDP1-205ENST00000590599 DNAAF4Q8WXU2 420 aa22.79■■□□□ 1.24
CTDP1-205ENST00000590599 RBM42Q9BTD8 480 aaKnown RBP22.78■■□□□ 1.24
CTDP1-205ENST00000590599 ADCY9O60503 1353 aa22.78■■□□□ 1.24
CTDP1-205ENST00000590599 TEX13AQ9BXU3 409 aaPredicted RBP22.78■■□□□ 1.24
CTDP1-205ENST00000590599 C1orf115Q9H7X2 142 aa22.78■■□□□ 1.24
CTDP1-205ENST00000590599 KSR2Q6VAB6 950 aa22.77■■□□□ 1.24
CTDP1-205ENST00000590599 RGPD3A6NKT7 1758 aaPredicted RBP22.77■■□□□ 1.24
CTDP1-205ENST00000590599 RGPD4Q7Z3J3 1758 aa22.77■■□□□ 1.24
CTDP1-205ENST00000590599 AIMP1Q12904 312 aaKnown RBP22.76■■□□□ 1.23
CTDP1-205ENST00000590599 HDAC1Q13547 482 aaPredicted RBP22.76■■□□□ 1.23
CTDP1-205ENST00000590599 MEIS3Q99687 375 aa22.76■■□□□ 1.23
CTDP1-205ENST00000590599 XAGE3Q8WTP9 111 aa22.76■■□□□ 1.23
CTDP1-205ENST00000590599 SRCIN1Q9C0H9 1055 aa22.76■■□□□ 1.23
CTDP1-205ENST00000590599 MAP3K2Q9Y2U5 619 aa22.76■■□□□ 1.23
CTDP1-205ENST00000590599 ATP10DQ9P241 1426 aa22.75■■□□□ 1.23
CTDP1-205ENST00000590599 PIP4K2AP48426 406 aaPredicted RBP22.75■■□□□ 1.23
CTDP1-205ENST00000590599 PLSCR1O15162 318 aa22.73■■□□□ 1.23
CTDP1-205ENST00000590599 COPS6Q7L5N1 327 aa22.73■■□□□ 1.23
CTDP1-205ENST00000590599 LRP10Q7Z4F1 713 aa22.73■■□□□ 1.23
CTDP1-205ENST00000590599 DNAJC10Q8IXB1 793 aa22.73■■□□□ 1.23
CTDP1-205ENST00000590599 STARD3NLO95772 234 aa22.73■■□□□ 1.23
CTDP1-205ENST00000590599 ANO8Q9HCE9 1232 aaPredicted RBP22.73■■□□□ 1.23
CTDP1-205ENST00000590599 NBPF26B4DH59 902 aa22.72■■□□□ 1.23
CTDP1-205ENST00000590599 A1BGP04217 495 aa22.72■■□□□ 1.23
CTDP1-205ENST00000590599 GNAI3P08754 354 aa22.72■■□□□ 1.23
CTDP1-205ENST00000590599 BEND3Q5T5X7 828 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms