RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 U2AF1Q01081 240 aaKnown RBP eCLIP10.14□□□□□ -0.79
NPC1-208ENST00000590301 ZNF790Q6PG37 636 aa10.14□□□□□ -0.79
NPC1-208ENST00000590301 IL17REQ8NFR9 667 aa10.14□□□□□ -0.79
NPC1-208ENST00000590301 NARFQ9UHQ1 456 aa10.14□□□□□ -0.79
NPC1-208ENST00000590301 PXDNLA1KZ92 1463 aa10.14□□□□□ -0.79
NPC1-208ENST00000590301 ADAMTS7Q9UKP4 1686 aa10.13□□□□□ -0.79
NPC1-208ENST00000590301 GIGYF1O75420 1035 aaPredicted RBP10.13□□□□□ -0.79
NPC1-208ENST00000590301 RTF1Q92541 710 aaKnown RBP10.13□□□□□ -0.79
NPC1-208ENST00000590301 PHACTR3Q96KR7 559 aa10.13□□□□□ -0.79
NPC1-208ENST00000590301 FMNL2Q96PY5 1086 aa10.13□□□□□ -0.79
NPC1-208ENST00000590301 SRP68Q9UHB9 627 aaKnown RBP10.13□□□□□ -0.79
NPC1-208ENST00000590301 GOLGB1Q14789 3259 aaKnown RBP10.13□□□□□ -0.79
NPC1-208ENST00000590301 COL15A1P39059 1388 aa10.13□□□□□ -0.79
NPC1-208ENST00000590301 NEFMP07197 916 aa10.12□□□□□ -0.79
NPC1-208ENST00000590301 TM4SF1P30408 202 aa10.12□□□□□ -0.79
NPC1-208ENST00000590301 C1QTNF8P60827 252 aa10.12□□□□□ -0.79
NPC1-208ENST00000590301 DDR1Q08345 913 aa10.12□□□□□ -0.79
NPC1-208ENST00000590301 USPL1Q5W0Q7 1092 aa10.12□□□□□ -0.79
NPC1-208ENST00000590301 ZNF496Q96IT1 587 aaPredicted RBP10.12□□□□□ -0.79
NPC1-208ENST00000590301 ZBTB1Q9Y2K1 713 aa10.12□□□□□ -0.79
NPC1-208ENST00000590301 ADCY9O60503 1353 aa10.12□□□□□ -0.79
NPC1-208ENST00000590301 HEG1Q9ULI3 1381 aa10.12□□□□□ -0.79
NPC1-208ENST00000590301 COL5A3P25940 1745 aaPredicted RBP10.11□□□□□ -0.79
NPC1-208ENST00000590301 A0A0G2JLW4 131 aa10.11□□□□□ -0.79
NPC1-208ENST00000590301 BTBD11A6QL63 1104 aa10.11□□□□□ -0.79
NPC1-208ENST00000590301 POLRMTO00411 1230 aaKnown RBP10.11□□□□□ -0.79
NPC1-208ENST00000590301 DPEP1P16444 411 aa10.11□□□□□ -0.79
NPC1-208ENST00000590301 EIF5P55010 431 aaKnown RBP10.11□□□□□ -0.79
NPC1-208ENST00000590301 NPM2Q86SE8 214 aaKnown RBP10.11□□□□□ -0.79
NPC1-208ENST00000590301 PNNQ9H307 717 aaKnown RBP10.11□□□□□ -0.79
NPC1-208ENST00000590301 PIM2Q9P1W9 311 aa10.11□□□□□ -0.79
NPC1-208ENST00000590301 ATP10DQ9P241 1426 aa10.1□□□□□ -0.79
NPC1-208ENST00000590301 CANXP27824 592 aaKnown RBP10.1□□□□□ -0.79
NPC1-208ENST00000590301 IL6STP40189 918 aaPredicted RBP10.1□□□□□ -0.79
NPC1-208ENST00000590301 SPINK5Q9NQ38 1064 aaPredicted RBP10.1□□□□□ -0.79
NPC1-208ENST00000590301 BCS1LQ9Y276 419 aa10.1□□□□□ -0.79
NPC1-208ENST00000590301 C4AP0C0L4 1744 aa10.1□□□□□ -0.79
NPC1-208ENST00000590301 TJP1Q07157 1748 aa10.1□□□□□ -0.79
NPC1-208ENST00000590301 SCN11AQ9UI33 1791 aa10.09□□□□□ -0.79
NPC1-208ENST00000590301 KCNA3P22001 575 aa10.09□□□□□ -0.79
NPC1-208ENST00000590301 PLCB2Q00722 1185 aa10.09□□□□□ -0.79
NPC1-208ENST00000590301 NFIXQ14938 502 aa10.09□□□□□ -0.79
NPC1-208ENST00000590301 DALRD3Q5D0E6 543 aaKnown RBP10.09□□□□□ -0.79
NPC1-208ENST00000590301 GPBP1L1Q9HC44 474 aaPredicted RBP10.09□□□□□ -0.79
NPC1-208ENST00000590301 PDZRN3Q9UPQ7 1066 aa10.09□□□□□ -0.79
NPC1-208ENST00000590301 RGL2O15211 777 aa10.08□□□□□ -0.8
NPC1-208ENST00000590301 SNRPA1P09661 255 aaKnown RBP10.08□□□□□ -0.8
NPC1-208ENST00000590301 RALBP1Q15311 655 aa10.08□□□□□ -0.8
NPC1-208ENST00000590301 PNISRQ8TF01 805 aaKnown RBP10.08□□□□□ -0.8
NPC1-208ENST00000590301 BCL2L12Q9HB09 334 aa10.08□□□□□ -0.8
NPC1-208ENST00000590301 WWC3Q9ULE0 1092 aa10.08□□□□□ -0.8
NPC1-208ENST00000590301 SERPINB2P05120 415 aa10.07□□□□□ -0.8
NPC1-208ENST00000590301 TAF7Q15545 349 aaPredicted RBP10.07□□□□□ -0.8
NPC1-208ENST00000590301 ARHGAP27Q6ZUM4 889 aa10.07□□□□□ -0.8
NPC1-208ENST00000590301 MCM10Q7L590 875 aa10.07□□□□□ -0.8
NPC1-208ENST00000590301 CARMIL3Q8ND23 1372 aa10.06□□□□□ -0.8
NPC1-208ENST00000590301 MAPK8IP3Q9UPT6 1336 aa10.06□□□□□ -0.8
NPC1-208ENST00000590301 SENP3-EIF4A1A0A087X0R7 540 aa10.05□□□□□ -0.8
NPC1-208ENST00000590301 A1BGP04217 495 aa10.05□□□□□ -0.8
NPC1-208ENST00000590301 CHRNA5P30532 468 aa10.05□□□□□ -0.8
NPC1-208ENST00000590301 PDE6BP35913 854 aa10.05□□□□□ -0.8
NPC1-208ENST00000590301 NFE2L2Q16236 605 aa10.05□□□□□ -0.8
NPC1-208ENST00000590301 CLEC4GQ6UXB4 293 aa10.05□□□□□ -0.8
NPC1-208ENST00000590301 PLEKHF1Q96S99 279 aa10.05□□□□□ -0.8
NPC1-208ENST00000590301 BRIP1Q9BX63 1249 aa10.05□□□□□ -0.8
NPC1-208ENST00000590301 ZNF652Q9Y2D9 606 aa10.05□□□□□ -0.8
NPC1-208ENST00000590301 UBR2Q8IWV8 1755 aa10.04□□□□□ -0.8
NPC1-208ENST00000590301 CHD4Q14839 1912 aa10.04□□□□□ -0.8
NPC1-208ENST00000590301 H0YIN7 160 aa10.04□□□□□ -0.8
NPC1-208ENST00000590301 KCNQ3O43525 872 aa10.04□□□□□ -0.8
NPC1-208ENST00000590301 CAMTA2O94983 1202 aa10.04□□□□□ -0.8
NPC1-208ENST00000590301 TBC1D9BQ66K14 1250 aa10.04□□□□□ -0.8
NPC1-208ENST00000590301 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
NPC1-208ENST00000590301 TTLL6Q8N841 843 aa10.04□□□□□ -0.8
NPC1-208ENST00000590301 SETDB2Q96T68 719 aa10.04□□□□□ -0.8
NPC1-208ENST00000590301 TBC1D2BQ9UPU7 963 aa10.04□□□□□ -0.8
NPC1-208ENST00000590301 ZNF330Q9Y3S2 320 aaPredicted RBP10.04□□□□□ -0.8
NPC1-208ENST00000590301 USP16Q9Y5T5 823 aa10.04□□□□□ -0.8
NPC1-208ENST00000590301 KIF13BQ9NQT8 1826 aa10.04□□□□□ -0.8
NPC1-208ENST00000590301 ZC3H4Q9UPT8 1303 aaKnown RBP10.04□□□□□ -0.8
NPC1-208ENST00000590301 MYH14Q7Z406 1995 aaKnown RBP10.03□□□□□ -0.8
NPC1-208ENST00000590301 LMOD3Q0VAK6 560 aa10.03□□□□□ -0.8
NPC1-208ENST00000590301 DCTN1Q14203 1278 aa10.03□□□□□ -0.8
NPC1-208ENST00000590301 C9orf131Q5VYM1 1079 aa10.03□□□□□ -0.8
NPC1-208ENST00000590301 BICDL1Q6ZP65 573 aa10.03□□□□□ -0.8
NPC1-208ENST00000590301 C2CD5Q86YS7 1000 aa10.03□□□□□ -0.8
NPC1-208ENST00000590301 CNBD1Q8NA66 436 aa10.03□□□□□ -0.8
NPC1-208ENST00000590301 ZNF526Q8TF50 670 aaPredicted RBP10.03□□□□□ -0.8
NPC1-208ENST00000590301 NPHP1O15259 732 aa10.02□□□□□ -0.81
NPC1-208ENST00000590301 ST5P78524 1137 aa10.02□□□□□ -0.81
NPC1-208ENST00000590301 PRR5LQ6MZQ0 368 aa10.02□□□□□ -0.81
NPC1-208ENST00000590301 BABAM1Q9NWV8 329 aa10.02□□□□□ -0.81
NPC1-208ENST00000590301 MYBBP1AQ9BQG0 1328 aaKnown RBP10.02□□□□□ -0.81
NPC1-208ENST00000590301 KIAA1551Q9HCM1 1747 aa10.02□□□□□ -0.81
NPC1-208ENST00000590301 RNF181Q9P0P0 153 aa10.01□□□□□ -0.81
NPC1-208ENST00000590301 ERBB4Q15303 1308 aa10.01□□□□□ -0.81
NPC1-208ENST00000590301 KDM2BQ8NHM5 1336 aa10.01□□□□□ -0.81
NPC1-208ENST00000590301 PRAMEF22A3QJZ6 481 aa10□□□□□ -0.81
NPC1-208ENST00000590301 NBPF26B4DH59 902 aa10□□□□□ -0.81
NPC1-208ENST00000590301 KIF3CO14782 793 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms