RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 PLEKHF1Q96S99 279 aa18.28■□□□□ 0.52
NEDD4L-228ENST00000590248 HEG1Q9ULI3 1381 aa18.28■□□□□ 0.52
NEDD4L-228ENST00000590248 PARP3Q9Y6F1 533 aa18.27■□□□□ 0.52
NEDD4L-228ENST00000590248 ZPR1O75312 459 aa18.26■□□□□ 0.51
NEDD4L-228ENST00000590248 FMNL2Q96PY5 1086 aa18.26■□□□□ 0.51
NEDD4L-228ENST00000590248 MIS18AQ9NYP9 233 aa18.26■□□□□ 0.51
NEDD4L-228ENST00000590248 KIAA1551Q9HCM1 1747 aa18.26■□□□□ 0.51
NEDD4L-228ENST00000590248 A0A0G2JLW4 131 aa18.25■□□□□ 0.51
NEDD4L-228ENST00000590248 PRAMEF22A3QJZ6 481 aa18.25■□□□□ 0.51
NEDD4L-228ENST00000590248 STARD3NLO95772 234 aa18.25■□□□□ 0.51
NEDD4L-228ENST00000590248 A1BGP04217 495 aa18.25■□□□□ 0.51
NEDD4L-228ENST00000590248 DDR1Q08345 913 aa18.25■□□□□ 0.51
NEDD4L-228ENST00000590248 AFDNP55196 1824 aaKnown RBP18.24■□□□□ 0.51
NEDD4L-228ENST00000590248 GRIN3BO60391 1043 aa18.24■□□□□ 0.51
NEDD4L-228ENST00000590248 NEFMP07197 916 aa18.24■□□□□ 0.51
NEDD4L-228ENST00000590248 ZNF784Q8NCA9 323 aaPredicted RBP18.24■□□□□ 0.51
NEDD4L-228ENST00000590248 NARFQ9UHQ1 456 aa18.24■□□□□ 0.51
NEDD4L-228ENST00000590248 ZNF330Q9Y3S2 320 aaPredicted RBP18.24■□□□□ 0.51
NEDD4L-228ENST00000590248 USP16Q9Y5T5 823 aa18.24■□□□□ 0.51
NEDD4L-228ENST00000590248 COL15A1P39059 1388 aa18.24■□□□□ 0.51
NEDD4L-228ENST00000590248 HTATSF1O43719 755 aaKnown RBP18.23■□□□□ 0.51
NEDD4L-228ENST00000590248 TM4SF1P30408 202 aa18.23■□□□□ 0.51
NEDD4L-228ENST00000590248 EIF5P55010 431 aaKnown RBP18.23■□□□□ 0.51
NEDD4L-228ENST00000590248 THUMPD2Q9BTF0 503 aaKnown RBP18.23■□□□□ 0.51
NEDD4L-228ENST00000590248 BCL2L12Q9HB09 334 aa18.23■□□□□ 0.51
NEDD4L-228ENST00000590248 PIP4K2AP48426 406 aaPredicted RBP18.22■□□□□ 0.51
NEDD4L-228ENST00000590248 TEX13AQ9BXU3 409 aaPredicted RBP18.22■□□□□ 0.51
NEDD4L-228ENST00000590248 MYBBP1AQ9BQG0 1328 aaKnown RBP18.22■□□□□ 0.51
NEDD4L-228ENST00000590248 PXDNLA1KZ92 1463 aa18.21■□□□□ 0.51
NEDD4L-228ENST00000590248 POLRMTO00411 1230 aaKnown RBP18.21■□□□□ 0.51
NEDD4L-228ENST00000590248 DPEP1P16444 411 aa18.21■□□□□ 0.51
NEDD4L-228ENST00000590248 NFIXQ14938 502 aa18.21■□□□□ 0.51
NEDD4L-228ENST00000590248 TAF7Q15545 349 aaPredicted RBP18.21■□□□□ 0.51
NEDD4L-228ENST00000590248 NFE2L2Q16236 605 aa18.21■□□□□ 0.51
NEDD4L-228ENST00000590248 TBC1D2BQ9UPU7 963 aa18.21■□□□□ 0.51
NEDD4L-228ENST00000590248 C10orf71Q711Q0 1435 aa18.21■□□□□ 0.51
NEDD4L-228ENST00000590248 BRCA1P38398 1863 aaKnown RBP18.2■□□□□ 0.5
NEDD4L-228ENST00000590248 TGFB2P61812 414 aa18.2■□□□□ 0.5
NEDD4L-228ENST00000590248 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
NEDD4L-228ENST00000590248 BICDL1Q6ZP65 573 aa18.19■□□□□ 0.5
NEDD4L-228ENST00000590248 PNNQ9H307 717 aaKnown RBP18.19■□□□□ 0.5
NEDD4L-228ENST00000590248 CCDC146Q8IYE0 955 aa18.18■□□□□ 0.5
NEDD4L-228ENST00000590248 BCS1LQ9Y276 419 aa18.18■□□□□ 0.5
NEDD4L-228ENST00000590248 KDM3BQ7LBC6 1761 aa18.17■□□□□ 0.5
NEDD4L-228ENST00000590248 SNRPA1P09661 255 aaKnown RBP18.17■□□□□ 0.5
NEDD4L-228ENST00000590248 KCNA3P22001 575 aa18.17■□□□□ 0.5
NEDD4L-228ENST00000590248 IL6STP40189 918 aaPredicted RBP18.17■□□□□ 0.5
NEDD4L-228ENST00000590248 A0A087WZG4 1122 aa18.16■□□□□ 0.5
NEDD4L-228ENST00000590248 CHRNA5P30532 468 aa18.16■□□□□ 0.5
NEDD4L-228ENST00000590248 RIPK4P57078 832 aa18.16■□□□□ 0.5
NEDD4L-228ENST00000590248 TBC1D9BQ66K14 1250 aa18.16■□□□□ 0.5
NEDD4L-228ENST00000590248 PRKRIP1Q9H875 184 aaPredicted RBP18.16■□□□□ 0.5
NEDD4L-228ENST00000590248 RRP7AQ9Y3A4 280 aaKnown RBP18.16■□□□□ 0.5
NEDD4L-228ENST00000590248 SERPINB2P05120 415 aa18.15■□□□□ 0.5
NEDD4L-228ENST00000590248 NRXN2Q9P2S2 1712 aa18.15■□□□□ 0.5
NEDD4L-228ENST00000590248 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
NEDD4L-228ENST00000590248 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
NEDD4L-228ENST00000590248 SCN7AQ01118 1682 aa18.13■□□□□ 0.49
NEDD4L-228ENST00000590248 NBPF26B4DH59 902 aa18.13■□□□□ 0.49
NEDD4L-228ENST00000590248 TMPOP42166 694 aaKnown RBP18.13■□□□□ 0.49
NEDD4L-228ENST00000590248 NBPF10Q6P3W6 841 aaKnown RBP18.13■□□□□ 0.49
NEDD4L-228ENST00000590248 NPM2Q86SE8 214 aaKnown RBP18.13■□□□□ 0.49
NEDD4L-228ENST00000590248 CCDC24Q8N4L8 307 aa18.13■□□□□ 0.49
NEDD4L-228ENST00000590248 NBPF15Q8N660 670 aa18.13■□□□□ 0.49
NEDD4L-228ENST00000590248 ADAMTS8Q9UP79 889 aa18.13■□□□□ 0.49
NEDD4L-228ENST00000590248 ARFGEF1Q9Y6D6 1849 aa18.13■□□□□ 0.49
NEDD4L-228ENST00000590248 CAMTA2O94983 1202 aa18.12■□□□□ 0.49
NEDD4L-228ENST00000590248 DZIP3Q86Y13 1208 aaKnown RBP18.12■□□□□ 0.49
NEDD4L-228ENST00000590248 PIM2Q9P1W9 311 aa18.12■□□□□ 0.49
NEDD4L-228ENST00000590248 BCORQ6W2J9 1755 aa18.12■□□□□ 0.49
NEDD4L-228ENST00000590248 EIF4A1P60842 406 aaKnown RBP18.11■□□□□ 0.49
NEDD4L-228ENST00000590248 WDR43Q15061 677 aaKnown RBP eCLIP18.11■□□□□ 0.49
NEDD4L-228ENST00000590248 ARHGAP27Q6ZUM4 889 aa18.11■□□□□ 0.49
NEDD4L-228ENST00000590248 PNISRQ8TF01 805 aaKnown RBP18.11■□□□□ 0.49
NEDD4L-228ENST00000590248 CARMIL3Q8ND23 1372 aa18.11■□□□□ 0.49
NEDD4L-228ENST00000590248 LAMB4A4D0S4 1761 aa18.11■□□□□ 0.49
NEDD4L-228ENST00000590248 ANKRD31Q8N7Z5 1873 aa18.11■□□□□ 0.49
NEDD4L-228ENST00000590248 GIGYF1O75420 1035 aaPredicted RBP18.1■□□□□ 0.49
NEDD4L-228ENST00000590248 NGEFQ8N5V2 710 aa18.1■□□□□ 0.49
NEDD4L-228ENST00000590248 ZNF526Q8TF50 670 aaPredicted RBP18.09■□□□□ 0.49
NEDD4L-228ENST00000590248 TSPYL4Q9UJ04 414 aa18.09■□□□□ 0.49
NEDD4L-228ENST00000590248 DALRD3Q5D0E6 543 aaKnown RBP18.08■□□□□ 0.48
NEDD4L-228ENST00000590248 RUNDC1Q96C34 613 aa18.08■□□□□ 0.48
NEDD4L-228ENST00000590248 SETDB2Q96T68 719 aa18.08■□□□□ 0.48
NEDD4L-228ENST00000590248 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
NEDD4L-228ENST00000590248 CACNA1SQ13698 1873 aa18.07■□□□□ 0.48
NEDD4L-228ENST00000590248 NUP98P52948 1817 aa18.07■□□□□ 0.48
NEDD4L-228ENST00000590248 DLEC1Q9Y238 1755 aa18.07■□□□□ 0.48
NEDD4L-228ENST00000590248 SBF1O95248 1867 aa18.06■□□□□ 0.48
NEDD4L-228ENST00000590248 CCDC88AQ3V6T2 1871 aa18.06■□□□□ 0.48
NEDD4L-228ENST00000590248 CCDC184Q52MB2 194 aa18.06■□□□□ 0.48
NEDD4L-228ENST00000590248 PRR5LQ6MZQ0 368 aa18.06■□□□□ 0.48
NEDD4L-228ENST00000590248 C2CD5Q86YS7 1000 aa18.06■□□□□ 0.48
NEDD4L-228ENST00000590248 TRIM35Q9UPQ4 493 aa18.06■□□□□ 0.48
NEDD4L-228ENST00000590248 MYL6BP14649 208 aa18.05■□□□□ 0.48
NEDD4L-228ENST00000590248 HLFQ16534 295 aa18.05■□□□□ 0.48
NEDD4L-228ENST00000590248 LAS1LQ9Y4W2 734 aaKnown RBP18.05■□□□□ 0.48
NEDD4L-228ENST00000590248 FAM177BA6PVY3 158 aa18.04■□□□□ 0.48
NEDD4L-228ENST00000590248 EIF2S2P20042 333 aaKnown RBP18.04■□□□□ 0.48
NEDD4L-228ENST00000590248 LMOD3Q0VAK6 560 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms