RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 PIM2Q9P1W9 311 aa28.27■■■□□ 2.12
TMC6-213ENST00000589933 NARFQ9UHQ1 456 aa28.26■■■□□ 2.11
TMC6-213ENST00000589933 COL15A1P39059 1388 aa28.25■■■□□ 2.11
TMC6-213ENST00000589933 TEX13AQ9BXU3 409 aaPredicted RBP28.25■■■□□ 2.11
TMC6-213ENST00000589933 TM4SF1P30408 202 aa28.23■■■□□ 2.11
TMC6-213ENST00000589933 DDR1Q08345 913 aa28.23■■■□□ 2.11
TMC6-213ENST00000589933 NPM2Q86SE8 214 aaKnown RBP28.23■■■□□ 2.11
TMC6-213ENST00000589933 ZBTB1Q9Y2K1 713 aa28.23■■■□□ 2.11
TMC6-213ENST00000589933 GOLGB1Q14789 3259 aaKnown RBP28.23■■■□□ 2.11
TMC6-213ENST00000589933 A0A087WZG4 1122 aa28.22■■■□□ 2.11
TMC6-213ENST00000589933 DALRD3Q5D0E6 543 aaKnown RBP28.22■■■□□ 2.11
TMC6-213ENST00000589933 POLRMTO00411 1230 aaKnown RBP28.21■■■□□ 2.11
TMC6-213ENST00000589933 CANXP27824 592 aaKnown RBP28.21■■■□□ 2.11
TMC6-213ENST00000589933 SIPA1L3O60292 1781 aaPredicted RBP28.21■■■□□ 2.11
TMC6-213ENST00000589933 AFDNP55196 1824 aaKnown RBP28.2■■■□□ 2.11
TMC6-213ENST00000589933 ZNF790Q6PG37 636 aa28.2■■■□□ 2.1
TMC6-213ENST00000589933 PRKAR2BP31323 418 aa28.19■■■□□ 2.1
TMC6-213ENST00000589933 IL17REQ8NFR9 667 aa28.19■■■□□ 2.1
TMC6-213ENST00000589933 KCNA3P22001 575 aa28.18■■■□□ 2.1
TMC6-213ENST00000589933 HEG1Q9ULI3 1381 aa28.17■■■□□ 2.1
TMC6-213ENST00000589933 NFIXQ14938 502 aa28.17■■■□□ 2.1
TMC6-213ENST00000589933 FMNL2Q96PY5 1086 aa28.17■■■□□ 2.1
TMC6-213ENST00000589933 U2AF1L5P0DN76 240 aaPredicted RBP28.16■■■□□ 2.1
TMC6-213ENST00000589933 U2AF1Q01081 240 aaKnown RBP eCLIP28.16■■■□□ 2.1
TMC6-213ENST00000589933 RTF1Q92541 710 aaKnown RBP28.16■■■□□ 2.1
TMC6-213ENST00000589933 ZNF496Q96IT1 587 aaPredicted RBP28.16■■■□□ 2.1
TMC6-213ENST00000589933 RSPH6AQ9H0K4 717 aa28.15■■■□□ 2.1
TMC6-213ENST00000589933 SERPINB2P05120 415 aa28.14■■■□□ 2.1
TMC6-213ENST00000589933 PPP2R1AP30153 589 aa28.14■■■□□ 2.1
TMC6-213ENST00000589933 CHRNA5P30532 468 aa28.14■■■□□ 2.1
TMC6-213ENST00000589933 NRXN2Q9P2S2 1712 aa28.13■■■□□ 2.09
TMC6-213ENST00000589933 BTBD11A6QL63 1104 aa28.13■■■□□ 2.09
TMC6-213ENST00000589933 NEFMP07197 916 aa28.13■■■□□ 2.09
TMC6-213ENST00000589933 EIF5P55010 431 aaKnown RBP28.13■■■□□ 2.09
TMC6-213ENST00000589933 ZNF330Q9Y3S2 320 aaPredicted RBP28.13■■■□□ 2.09
TMC6-213ENST00000589933 CEMIPQ8WUJ3 1361 aa28.12■■■□□ 2.09
TMC6-213ENST00000589933 PHACTR3Q96KR7 559 aa28.12■■■□□ 2.09
TMC6-213ENST00000589933 C9orf131Q5VYM1 1079 aa28.11■■■□□ 2.09
TMC6-213ENST00000589933 IL6STP40189 918 aaPredicted RBP28.1■■■□□ 2.09
TMC6-213ENST00000589933 KIF3CO14782 793 aa28.09■■■□□ 2.09
TMC6-213ENST00000589933 HSPA6P17066 643 aa28.09■■■□□ 2.09
TMC6-213ENST00000589933 BICDL1Q6ZP65 573 aa28.09■■■□□ 2.09
TMC6-213ENST00000589933 BCL2L12Q9HB09 334 aa28.09■■■□□ 2.09
TMC6-213ENST00000589933 DLEC1Q9Y238 1755 aa28.09■■■□□ 2.09
TMC6-213ENST00000589933 SBF1O95248 1867 aa28.08■■■□□ 2.09
TMC6-213ENST00000589933 H0YIN7 160 aa28.07■■■□□ 2.08
TMC6-213ENST00000589933 PDZRN3Q9UPQ7 1066 aa28.07■■■□□ 2.08
TMC6-213ENST00000589933 NPHP1O15259 732 aa28.06■■■□□ 2.08
TMC6-213ENST00000589933 RNF181Q9P0P0 153 aa28.06■■■□□ 2.08
TMC6-213ENST00000589933 SCN7AQ01118 1682 aa28.06■■■□□ 2.08
TMC6-213ENST00000589933 HTATSF1O43719 755 aaKnown RBP28.05■■■□□ 2.08
TMC6-213ENST00000589933 TOMM70O94826 608 aa28.05■■■□□ 2.08
TMC6-213ENST00000589933 C2CD5Q86YS7 1000 aa28.05■■■□□ 2.08
TMC6-213ENST00000589933 TTLL6Q8N841 843 aa28.05■■■□□ 2.08
TMC6-213ENST00000589933 KDM2BQ8NHM5 1336 aa28.05■■■□□ 2.08
TMC6-213ENST00000589933 TBC1D2BQ9UPU7 963 aa28.05■■■□□ 2.08
TMC6-213ENST00000589933 C16orf71Q8IYS4 520 aaPredicted RBP28.04■■■□□ 2.08
TMC6-213ENST00000589933 CARMIL3Q8ND23 1372 aa28.02■■■□□ 2.08
TMC6-213ENST00000589933 A1BGP04217 495 aa28.02■■■□□ 2.08
TMC6-213ENST00000589933 SNRPA1P09661 255 aaKnown RBP28.02■■■□□ 2.08
TMC6-213ENST00000589933 PDE6BP35913 854 aa28.02■■■□□ 2.08
TMC6-213ENST00000589933 TBC1D9BQ66K14 1250 aa28.02■■■□□ 2.08
TMC6-213ENST00000589933 MCM10Q7L590 875 aa28.02■■■□□ 2.08
TMC6-213ENST00000589933 SETDB2Q96T68 719 aa28.02■■■□□ 2.08
TMC6-213ENST00000589933 CCDC88AQ3V6T2 1871 aa28■■■□□ 2.07
TMC6-213ENST00000589933 KCNQ3O43525 872 aa28■■■□□ 2.07
TMC6-213ENST00000589933 DZIP3Q86Y13 1208 aaKnown RBP27.99■■■□□ 2.07
TMC6-213ENST00000589933 BRIP1Q9BX63 1249 aa27.99■■■□□ 2.07
TMC6-213ENST00000589933 PNNQ9H307 717 aaKnown RBP27.99■■■□□ 2.07
TMC6-213ENST00000589933 NMRK2Q9NPI5 230 aa27.99■■■□□ 2.07
TMC6-213ENST00000589933 ZC3H4Q9UPT8 1303 aaKnown RBP27.98■■■□□ 2.07
TMC6-213ENST00000589933 ZNF652Q9Y2D9 606 aa27.98■■■□□ 2.07
TMC6-213ENST00000589933 USP16Q9Y5T5 823 aa27.98■■■□□ 2.07
TMC6-213ENST00000589933 BCORQ6W2J9 1755 aa27.97■■■□□ 2.07
TMC6-213ENST00000589933 DLG5Q8TDM6 1919 aa27.97■■■□□ 2.07
TMC6-213ENST00000589933 ST5P78524 1137 aa27.97■■■□□ 2.07
TMC6-213ENST00000589933 TAF7Q15545 349 aaPredicted RBP27.97■■■□□ 2.07
TMC6-213ENST00000589933 CNBD1Q8NA66 436 aa27.97■■■□□ 2.07
TMC6-213ENST00000589933 ZNF622Q969S3 477 aaKnown RBP eCLIP27.97■■■□□ 2.07
TMC6-213ENST00000589933 ANKRD31Q8N7Z5 1873 aa27.97■■■□□ 2.07
TMC6-213ENST00000589933 TNRC6CQ9HCJ0 1690 aaKnown RBP27.97■■■□□ 2.07
TMC6-213ENST00000589933 CAMTA2O94983 1202 aa27.96■■■□□ 2.07
TMC6-213ENST00000589933 LMNB1P20700 586 aa27.96■■■□□ 2.07
TMC6-213ENST00000589933 APLP1P51693 650 aa27.95■■■□□ 2.06
TMC6-213ENST00000589933 PRR5LQ6MZQ0 368 aa27.95■■■□□ 2.06
TMC6-213ENST00000589933 DCTN1Q14203 1278 aa27.94■■■□□ 2.06
TMC6-213ENST00000589933 CLEC4GQ6UXB4 293 aa27.94■■■□□ 2.06
TMC6-213ENST00000589933 RBM46Q8TBY0 533 aaKnown RBP27.94■■■□□ 2.06
TMC6-213ENST00000589933 PNISRQ8TF01 805 aaKnown RBP27.94■■■□□ 2.06
TMC6-213ENST00000589933 RASSF7Q02833 373 aa27.93■■■□□ 2.06
TMC6-213ENST00000589933 CNKSR1Q969H4 720 aa27.91■■■□□ 2.06
TMC6-213ENST00000589933 MAPK8IP3Q9UPT6 1336 aa27.91■■■□□ 2.06
TMC6-213ENST00000589933 CACNA1SQ13698 1873 aa27.89■■■□□ 2.06
TMC6-213ENST00000589933 NBPF5PQ86XG9 351 aaPredicted RBP27.89■■■□□ 2.06
TMC6-213ENST00000589933 RRAGCQ9HB90 399 aa27.89■■■□□ 2.06
TMC6-213ENST00000589933 LAMB4A4D0S4 1761 aa27.88■■■□□ 2.05
TMC6-213ENST00000589933 PRAMEF22A3QJZ6 481 aa27.88■■■□□ 2.05
TMC6-213ENST00000589933 RGL2O15211 777 aa27.88■■■□□ 2.05
TMC6-213ENST00000589933 PIP4K2AP48426 406 aaPredicted RBP27.88■■■□□ 2.05
TMC6-213ENST00000589933 FSTL1Q12841 308 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms