RNA–Protein interactions for RNA: ENST00000589638.1

TMED1-205, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 578 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-205ENST00000589638 ATP6V1AP38606 617 aa22.58■■□□□ 1.21
TMED1-205ENST00000589638 BRPF1P55201 1214 aaPredicted RBP22.58■■□□□ 1.21
TMED1-205ENST00000589638 DBF4Q9UBU7 674 aaPredicted RBP22.58■■□□□ 1.21
TMED1-205ENST00000589638 PIP4K2AP48426 406 aaPredicted RBP22.57■■□□□ 1.2
TMED1-205ENST00000589638 PROSER3Q2NL68 480 aa22.57■■□□□ 1.2
TMED1-205ENST00000589638 C20orf194Q5TEA3 1177 aa22.57■■□□□ 1.2
TMED1-205ENST00000589638 TEX13AQ9BXU3 409 aaPredicted RBP22.57■■□□□ 1.2
TMED1-205ENST00000589638 IPO8O15397 1037 aaKnown RBP22.56■■□□□ 1.2
TMED1-205ENST00000589638 MYL6BP14649 208 aa22.56■■□□□ 1.2
TMED1-205ENST00000589638 BTAF1O14981 1849 aa22.56■■□□□ 1.2
TMED1-205ENST00000589638 SBF2Q86WG5 1849 aa22.56■■□□□ 1.2
TMED1-205ENST00000589638 STARD3NLO95772 234 aa22.55■■□□□ 1.2
TMED1-205ENST00000589638 FKBP8Q14318 412 aa22.55■■□□□ 1.2
TMED1-205ENST00000589638 ATF7IPQ6VMQ6 1270 aa22.55■■□□□ 1.2
TMED1-205ENST00000589638 CLUAP1Q96AJ1 413 aa22.55■■□□□ 1.2
TMED1-205ENST00000589638 PHAXQ9H814 394 aaKnown RBP22.55■■□□□ 1.2
TMED1-205ENST00000589638 DDX21Q9NR30 783 aaKnown RBP eCLIP22.55■■□□□ 1.2
TMED1-205ENST00000589638 A1BGP04217 495 aa22.54■■□□□ 1.2
TMED1-205ENST00000589638 TRIM27P14373 513 aa22.54■■□□□ 1.2
TMED1-205ENST00000589638 FLIIQ13045 1269 aa22.54■■□□□ 1.2
TMED1-205ENST00000589638 ITPK1Q13572 414 aa22.54■■□□□ 1.2
TMED1-205ENST00000589638 PDIA6Q15084 440 aa22.54■■□□□ 1.2
TMED1-205ENST00000589638 LAMB4A4D0S4 1761 aa22.53■■□□□ 1.2
TMED1-205ENST00000589638 KCNQ4P56696 695 aa22.53■■□□□ 1.2
TMED1-205ENST00000589638 FTSJ3Q8IY81 847 aaKnown RBP22.53■■□□□ 1.2
TMED1-205ENST00000589638 PANK1Q8TE04 598 aa22.53■■□□□ 1.2
TMED1-205ENST00000589638 CYP19A1P11511 503 aaPredicted RBP22.52■■□□□ 1.2
TMED1-205ENST00000589638 API5Q9BZZ5 524 aaKnown RBP22.52■■□□□ 1.2
TMED1-205ENST00000589638 HYPKQ9NX55 129 aa22.52■■□□□ 1.2
TMED1-205ENST00000589638 CCNL1Q9UK58 526 aaPredicted RBP22.52■■□□□ 1.2
TMED1-205ENST00000589638 PTPRCP08575 1304 aa22.52■■□□□ 1.2
TMED1-205ENST00000589638 ERBB4Q15303 1308 aa22.52■■□□□ 1.2
TMED1-205ENST00000589638 NBPF26B4DH59 902 aa22.51■■□□□ 1.19
TMED1-205ENST00000589638 FKBP5Q13451 457 aaPredicted RBP22.51■■□□□ 1.19
TMED1-205ENST00000589638 NBPF14Q5TI25 921 aa22.51■■□□□ 1.19
TMED1-205ENST00000589638 NBPF10Q6P3W6 841 aaKnown RBP22.51■■□□□ 1.19
TMED1-205ENST00000589638 DZIP1LQ8IYY4 767 aaKnown RBP22.51■■□□□ 1.19
TMED1-205ENST00000589638 NBPF15Q8N660 670 aa22.51■■□□□ 1.19
TMED1-205ENST00000589638 ARHGAP45Q92619 1136 aa22.51■■□□□ 1.19
TMED1-205ENST00000589638 TJP1Q07157 1748 aa22.51■■□□□ 1.19
TMED1-205ENST00000589638 RLBP1P12271 317 aa22.5■■□□□ 1.19
TMED1-205ENST00000589638 AIMP1Q12904 312 aaKnown RBP22.5■■□□□ 1.19
TMED1-205ENST00000589638 CRBNQ96SW2 442 aa22.5■■□□□ 1.19
TMED1-205ENST00000589638 GTF3C3Q9Y5Q9 886 aa22.5■■□□□ 1.19
TMED1-205ENST00000589638 APBA3O96018 575 aa22.49■■□□□ 1.19
TMED1-205ENST00000589638 MS4A1P11836 297 aa22.49■■□□□ 1.19
TMED1-205ENST00000589638 PDE3AQ14432 1141 aa22.49■■□□□ 1.19
TMED1-205ENST00000589638 XAGE3Q8WTP9 111 aa22.49■■□□□ 1.19
TMED1-205ENST00000589638 ZNF330Q9Y3S2 320 aaPredicted RBP22.49■■□□□ 1.19
TMED1-205ENST00000589638 LINC00116Q8NCU8 138 aa22.48■■□□□ 1.19
TMED1-205ENST00000589638 ZBTB1Q9Y2K1 713 aa22.48■■□□□ 1.19
TMED1-205ENST00000589638 F6X3S4 739 aa22.47■■□□□ 1.19
TMED1-205ENST00000589638 COPS6Q7L5N1 327 aa22.47■■□□□ 1.19
TMED1-205ENST00000589638 LRP10Q7Z4F1 713 aa22.47■■□□□ 1.19
TMED1-205ENST00000589638 COG6Q9Y2V7 657 aa22.47■■□□□ 1.19
TMED1-205ENST00000589638 CRKLP46109 303 aaKnown RBP22.46■■□□□ 1.19
TMED1-205ENST00000589638 TMEM57Q8N5G2 664 aa22.46■■□□□ 1.19
TMED1-205ENST00000589638 EXOC6Q8TAG9 804 aa22.46■■□□□ 1.19
TMED1-205ENST00000589638 CCDC87Q9NVE4 849 aa22.46■■□□□ 1.19
TMED1-205ENST00000589638 ABCC4O15439 1325 aa22.45■■□□□ 1.18
TMED1-205ENST00000589638 INTS5Q6P9B9 1019 aaKnown RBP22.44■■□□□ 1.18
TMED1-205ENST00000589638 SLC4A10Q6U841 1118 aa22.44■■□□□ 1.18
TMED1-205ENST00000589638 ITPRIPQ8IWB1 547 aa22.44■■□□□ 1.18
TMED1-205ENST00000589638 PI4KAP2A4QPH2 592 aa22.43■■□□□ 1.18
TMED1-205ENST00000589638 DDX58O95786 925 aaKnown RBP22.43■■□□□ 1.18
TMED1-205ENST00000589638 PI4KAP1Q8N8J0 262 aa22.43■■□□□ 1.18
TMED1-205ENST00000589638 LRRC4BQ9NT99 713 aa22.43■■□□□ 1.18
TMED1-205ENST00000589638 CICQ96RK0 1608 aaPredicted RBP22.42■■□□□ 1.18
TMED1-205ENST00000589638 TXNRD1Q16881 649 aa22.42■■□□□ 1.18
TMED1-205ENST00000589638 TTLL7Q6ZT98 887 aa22.42■■□□□ 1.18
TMED1-205ENST00000589638 ARXQ96QS3 562 aa22.42■■□□□ 1.18
TMED1-205ENST00000589638 LY75O60449 1722 aa22.42■■□□□ 1.18
TMED1-205ENST00000589638 ADCY9O60503 1353 aa22.41■■□□□ 1.18
TMED1-205ENST00000589638 EP400Q96L91 3159 aa22.41■■□□□ 1.18
TMED1-205ENST00000589638 CNTNAP4Q9C0A0 1308 aa22.41■■□□□ 1.18
TMED1-205ENST00000589638 MVPQ14764 893 aaKnown RBP22.41■■□□□ 1.18
TMED1-205ENST00000589638 SLC27A3Q5K4L6 730 aa22.41■■□□□ 1.18
TMED1-205ENST00000589638 KSR2Q6VAB6 950 aa22.41■■□□□ 1.18
TMED1-205ENST00000589638 RIC3Q7Z5B4 369 aa22.41■■□□□ 1.18
TMED1-205ENST00000589638 NPM2Q86SE8 214 aaKnown RBP22.41■■□□□ 1.18
TMED1-205ENST00000589638 MAP3K2Q9Y2U5 619 aa22.41■■□□□ 1.18
TMED1-205ENST00000589638 ZNF831Q5JPB2 1677 aa22.4■■□□□ 1.18
TMED1-205ENST00000589638 PLSCR1O15162 318 aa22.4■■□□□ 1.18
TMED1-205ENST00000589638 IL6STP40189 918 aaPredicted RBP22.4■■□□□ 1.18
TMED1-205ENST00000589638 DNAAF4Q8WXU2 420 aa22.4■■□□□ 1.18
TMED1-205ENST00000589638 SF3B2Q13435 895 aaKnown RBP22.39■■□□□ 1.17
TMED1-205ENST00000589638 KIF6Q6ZMV9 814 aa22.39■■□□□ 1.17
TMED1-205ENST00000589638 ANKRD13DQ6ZTN6 518 aa22.39■■□□□ 1.17
TMED1-205ENST00000589638 PROM2Q8N271 834 aa22.39■■□□□ 1.17
TMED1-205ENST00000589638 TNS1Q9HBL0 1735 aaKnown RBP22.39■■□□□ 1.17
TMED1-205ENST00000589638 COL5A3P25940 1745 aaPredicted RBP22.38■■□□□ 1.17
TMED1-205ENST00000589638 ZBTB3Q9H5J0 574 aa22.38■■□□□ 1.17
TMED1-205ENST00000589638 CACNA1FO60840 1977 aa22.38■■□□□ 1.17
TMED1-205ENST00000589638 GNPATO15228 680 aa22.37■■□□□ 1.17
TMED1-205ENST00000589638 CCT4P50991 539 aaKnown RBP22.37■■□□□ 1.17
TMED1-205ENST00000589638 EIF5P55010 431 aaKnown RBP22.37■■□□□ 1.17
TMED1-205ENST00000589638 RC3H1Q5TC82 1133 aaKnown RBP22.37■■□□□ 1.17
TMED1-205ENST00000589638 INTS3Q68E01 1043 aaKnown RBP22.37■■□□□ 1.17
TMED1-205ENST00000589638 PLBD2Q8NHP8 589 aa22.37■■□□□ 1.17
TMED1-205ENST00000589638 AK7Q96M32 723 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms