RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ROCK2O75116 1388 aaKnown RBP8.71□□□□□ -1.02
VPS25-204ENST00000589577 CARMIL3Q8ND23 1372 aa8.71□□□□□ -1.02
VPS25-204ENST00000589577 ARFGEF2Q9Y6D5 1785 aa8.71□□□□□ -1.02
VPS25-204ENST00000589577 MAP2K1Q02750 393 aaPredicted RBP8.7□□□□□ -1.02
VPS25-204ENST00000589577 DPY19L2Q6NUT2 758 aa8.7□□□□□ -1.02
VPS25-204ENST00000589577 LDHDQ86WU2 507 aa8.7□□□□□ -1.02
VPS25-204ENST00000589577 TERF2IPQ9NYB0 399 aa8.7□□□□□ -1.02
VPS25-204ENST00000589577 WDR33Q9C0J8 1336 aaKnown RBP8.7□□□□□ -1.02
VPS25-204ENST00000589577 DEFB115Q30KQ5 88 aa8.69□□□□□ -1.02
VPS25-204ENST00000589577 ERFEQ4G0M1 354 aa8.69□□□□□ -1.02
VPS25-204ENST00000589577 MCOLN1Q9GZU1 580 aa8.69□□□□□ -1.02
VPS25-204ENST00000589577 TSKSQ9UJT2 592 aa8.69□□□□□ -1.02
VPS25-204ENST00000589577 FLT4P35916 1363 aa8.69□□□□□ -1.02
VPS25-204ENST00000589577 SLX4Q8IY92 1834 aa8.68□□□□□ -1.02
VPS25-204ENST00000589577 TRPM7Q96QT4 1865 aa8.68□□□□□ -1.02
VPS25-204ENST00000589577 PHKG2P15735 406 aa8.68□□□□□ -1.02
VPS25-204ENST00000589577 TTLL6Q8N841 843 aa8.68□□□□□ -1.02
VPS25-204ENST00000589577 CFAP44Q96MT7 982 aa8.68□□□□□ -1.02
VPS25-204ENST00000589577 RBM42Q9BTD8 480 aaKnown RBP8.68□□□□□ -1.02
VPS25-204ENST00000589577 TAF1DQ9H5J8 278 aaPredicted RBP8.68□□□□□ -1.02
VPS25-204ENST00000589577 MKI67P46013 3256 aaKnown RBP8.68□□□□□ -1.02
VPS25-204ENST00000589577 CRKLP46109 303 aaKnown RBP8.67□□□□□ -1.02
VPS25-204ENST00000589577 L3MBTL2Q969R5 705 aa8.67□□□□□ -1.02
VPS25-204ENST00000589577 TONSLQ96HA7 1378 aa8.67□□□□□ -1.02
VPS25-204ENST00000589577 L3MBTL3Q96JM7 780 aaPredicted RBP8.67□□□□□ -1.02
VPS25-204ENST00000589577 SPG7Q9UQ90 795 aa8.67□□□□□ -1.02
VPS25-204ENST00000589577 KIF24Q5T7B8 1368 aa8.66□□□□□ -1.02
VPS25-204ENST00000589577 LTBP3Q9NS15 1303 aa8.66□□□□□ -1.02
VPS25-204ENST00000589577 NFIXQ14938 502 aa8.66□□□□□ -1.02
VPS25-204ENST00000589577 PRPF38BQ5VTL8 546 aaKnown RBP8.66□□□□□ -1.02
VPS25-204ENST00000589577 IQCA1LA6NCM1 817 aa8.65□□□□□ -1.02
VPS25-204ENST00000589577 FYB1O15117 783 aa8.65□□□□□ -1.02
VPS25-204ENST00000589577 USPL1Q5W0Q7 1092 aa8.65□□□□□ -1.02
VPS25-204ENST00000589577 INTS5Q6P9B9 1019 aaKnown RBP8.65□□□□□ -1.02
VPS25-204ENST00000589577 C2CD5Q86YS7 1000 aa8.65□□□□□ -1.02
VPS25-204ENST00000589577 CAPNS2Q96L46 248 aa8.65□□□□□ -1.02
VPS25-204ENST00000589577 GGNBP2Q9H3C7 697 aa8.65□□□□□ -1.02
VPS25-204ENST00000589577 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.65□□□□□ -1.02
VPS25-204ENST00000589577 ZNF541Q9H0D2 1346 aa8.64□□□□□ -1.03
VPS25-204ENST00000589577 C21orf2O43822 256 aa8.64□□□□□ -1.03
VPS25-204ENST00000589577 FMR1Q06787 632 aaKnown RBP eCLIP8.64□□□□□ -1.03
VPS25-204ENST00000589577 MAP1SQ66K74 1059 aaPredicted RBP8.64□□□□□ -1.03
VPS25-204ENST00000589577 IFNL2Q8IZJ0 200 aa8.64□□□□□ -1.03
VPS25-204ENST00000589577 BCL2L12Q9HB09 334 aa8.64□□□□□ -1.03
VPS25-204ENST00000589577 ABT1Q9ULW3 272 aaKnown RBP8.64□□□□□ -1.03
VPS25-204ENST00000589577 SCN7AQ01118 1682 aa8.64□□□□□ -1.03
VPS25-204ENST00000589577 BCORQ6W2J9 1755 aa8.63□□□□□ -1.03
VPS25-204ENST00000589577 SOX10P56693 466 aa8.63□□□□□ -1.03
VPS25-204ENST00000589577 DGKZQ13574 1117 aa8.63□□□□□ -1.03
VPS25-204ENST00000589577 EAPPQ56P03 285 aaPredicted RBP8.63□□□□□ -1.03
VPS25-204ENST00000589577 CYP4F22Q6NT55 531 aa8.63□□□□□ -1.03
VPS25-204ENST00000589577 CNTROBQ8N137 903 aa8.63□□□□□ -1.03
VPS25-204ENST00000589577 GPR101Q96P66 508 aaPredicted RBP8.63□□□□□ -1.03
VPS25-204ENST00000589577 PUS7Q96PZ0 661 aaKnown RBP8.63□□□□□ -1.03
VPS25-204ENST00000589577 TAOK3Q9H2K8 898 aa8.63□□□□□ -1.03
VPS25-204ENST00000589577 ZNF219Q9P2Y4 722 aaPredicted RBP8.63□□□□□ -1.03
VPS25-204ENST00000589577 EMILIN1Q9Y6C2 1016 aa8.63□□□□□ -1.03
VPS25-204ENST00000589577 SCN11AQ9UI33 1791 aa8.63□□□□□ -1.03
VPS25-204ENST00000589577 SZT2Q5T011 3432 aa8.63□□□□□ -1.03
VPS25-204ENST00000589577 SOS1Q07889 1333 aaPredicted RBP8.62□□□□□ -1.03
VPS25-204ENST00000589577 ERVV-2B6SEH9 535 aa8.62□□□□□ -1.03
VPS25-204ENST00000589577 H0YIN7 160 aa8.62□□□□□ -1.03
VPS25-204ENST00000589577 AOC2O75106 756 aa8.62□□□□□ -1.03
VPS25-204ENST00000589577 PTCD1O75127 700 aaKnown RBP8.62□□□□□ -1.03
VPS25-204ENST00000589577 SERPINB2P05120 415 aa8.62□□□□□ -1.03
VPS25-204ENST00000589577 EYA1Q99502 592 aa8.62□□□□□ -1.03
VPS25-204ENST00000589577 DDX21Q9NR30 783 aaKnown RBP eCLIP8.62□□□□□ -1.03
VPS25-204ENST00000589577 EPHX2P34913 555 aa8.61□□□□□ -1.03
VPS25-204ENST00000589577 GRM1Q13255 1194 aa8.61□□□□□ -1.03
VPS25-204ENST00000589577 BEGAINQ9BUH8 593 aa8.61□□□□□ -1.03
VPS25-204ENST00000589577 COL15A1P39059 1388 aa8.61□□□□□ -1.03
VPS25-204ENST00000589577 RNF123Q5XPI4 1314 aa8.6□□□□□ -1.03
VPS25-204ENST00000589577 COL4A5P29400 1685 aa8.6□□□□□ -1.03
VPS25-204ENST00000589577 ZPR1O75312 459 aa8.6□□□□□ -1.03
VPS25-204ENST00000589577 CST9Q5W186 159 aa8.6□□□□□ -1.03
VPS25-204ENST00000589577 NARFQ9UHQ1 456 aa8.6□□□□□ -1.03
VPS25-204ENST00000589577 HACL1Q9UJ83 578 aa8.6□□□□□ -1.03
VPS25-204ENST00000589577 CLEC11AQ9Y240 323 aa8.6□□□□□ -1.03
VPS25-204ENST00000589577 UBR2Q8IWV8 1755 aa8.59□□□□□ -1.03
VPS25-204ENST00000589577 MAP2K2P36507 400 aa8.59□□□□□ -1.03
VPS25-204ENST00000589577 ECE1P42892 770 aa8.59□□□□□ -1.03
VPS25-204ENST00000589577 PAXIP1Q6ZW49 1069 aaPredicted RBP8.59□□□□□ -1.03
VPS25-204ENST00000589577 ZNF622Q969S3 477 aaKnown RBP eCLIP8.59□□□□□ -1.03
VPS25-204ENST00000589577 TESK2Q96S53 571 aa8.59□□□□□ -1.03
VPS25-204ENST00000589577 TLL2Q9Y6L7 1015 aa8.59□□□□□ -1.03
VPS25-204ENST00000589577 HTTP42858 3142 aa8.59□□□□□ -1.03
VPS25-204ENST00000589577 BRCA2P51587 3418 aa8.58□□□□□ -1.04
VPS25-204ENST00000589577 A0A0C4DFX4 3053 aa8.58□□□□□ -1.04
VPS25-204ENST00000589577 TRAF5O00463 557 aa8.58□□□□□ -1.04
VPS25-204ENST00000589577 CA12O43570 354 aa8.58□□□□□ -1.04
VPS25-204ENST00000589577 PRPF40BQ6NWY9 871 aaKnown RBP8.58□□□□□ -1.04
VPS25-204ENST00000589577 PNMA8AQ86V59 439 aaPredicted RBP8.58□□□□□ -1.04
VPS25-204ENST00000589577 DNAJC10Q8IXB1 793 aa8.58□□□□□ -1.04
VPS25-204ENST00000589577 CCDC24Q8N4L8 307 aa8.58□□□□□ -1.04
VPS25-204ENST00000589577 CENPFP49454 3210 aa8.58□□□□□ -1.04
VPS25-204ENST00000589577 WASHC2AQ641Q2 1341 aa8.57□□□□□ -1.04
VPS25-204ENST00000589577 CYP19A1P11511 503 aaPredicted RBP8.57□□□□□ -1.04
VPS25-204ENST00000589577 BRPF1P55201 1214 aaPredicted RBP8.57□□□□□ -1.04
VPS25-204ENST00000589577 CABP4P57796 275 aa8.57□□□□□ -1.04
VPS25-204ENST00000589577 PRR5LQ6MZQ0 368 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms