RNA–Protein interactions for RNA: ENST00000589444.1

PTPN2-209, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

Gene PTPN2, Length 2,264 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-209ENST00000589444 RAPGEF1Q13905 1077 aa6.85□□□□□ -1.31
PTPN2-209ENST00000589444 BRD3Q15059 726 aa6.85□□□□□ -1.31
PTPN2-209ENST00000589444 SNRNP27Q8WVK2 155 aaKnown RBP6.85□□□□□ -1.31
PTPN2-209ENST00000589444 FAM161BQ96MY7 647 aa6.85□□□□□ -1.31
PTPN2-209ENST00000589444 IFT122Q9HBG6 1241 aa6.85□□□□□ -1.31
PTPN2-209ENST00000589444 HMX1Q9NP08 348 aaPredicted RBP6.85□□□□□ -1.31
PTPN2-209ENST00000589444 ANO2Q9NQ90 1003 aa6.85□□□□□ -1.31
PTPN2-209ENST00000589444 DISP3Q9P2K9 1392 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 KRT18P05783 430 aaKnown RBP6.84□□□□□ -1.31
PTPN2-209ENST00000589444 SLFNL1Q499Z3 407 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 CRTC2Q53ET0 693 aaPredicted RBP6.84□□□□□ -1.31
PTPN2-209ENST00000589444 DDX46Q7L014 1031 aaKnown RBP6.84□□□□□ -1.31
PTPN2-209ENST00000589444 VPS37DQ86XT2 251 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 NLRP7Q8WX94 980 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 ANP32EQ9BTT0 268 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 TMEM106CQ9BVX2 250 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 CEP126Q9P2H0 1117 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 FGRP09769 529 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 PDE6BP35913 854 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 CBLBQ13191 982 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 SERINC3Q13530 473 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 RAVER1Q8IY67 606 aaKnown RBP6.84□□□□□ -1.31
PTPN2-209ENST00000589444 DDX12PQ92771 950 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.84□□□□□ -1.31
PTPN2-209ENST00000589444 OCEL1Q9H607 264 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 ARNT2Q9HBZ2 717 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 HOMER2Q9NSB8 354 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 SH3BP1Q9Y3L3 701 aa6.84□□□□□ -1.31
PTPN2-209ENST00000589444 TCERG1O14776 1098 aaKnown RBP6.83□□□□□ -1.32
PTPN2-209ENST00000589444 C21orf2O43822 256 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 MAP3K9P80192 1104 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 NBPF20Q3BBV1 942 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 AXDND1Q5T1B0 1012 aaPredicted RBP6.83□□□□□ -1.32
PTPN2-209ENST00000589444 PARP2Q9UGN5 583 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 LZTS1Q9Y250 596 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 CTDP1Q9Y5B0 961 aaPredicted RBP6.83□□□□□ -1.32
PTPN2-209ENST00000589444 USP17L3A6NCW0 530 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 USP17L4A6NCW7 530 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 NPHP1O15259 732 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 SORBS3O60504 671 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 BPNT1O95861 308 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 SCP2P22307 547 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 PPP2R5AQ15172 486 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 USP17L2Q6R6M4 530 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 USP17L1Q7RTZ2 530 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 TMC4Q7Z404 712 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 YTHDC1Q96MU7 727 aaKnown RBP6.83□□□□□ -1.32
PTPN2-209ENST00000589444 CHST12Q9NRB3 414 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 KIF21AQ7Z4S6 1674 aa6.83□□□□□ -1.32
PTPN2-209ENST00000589444 ERCC6L2Q5T890 1561 aa6.82□□□□□ -1.32
PTPN2-209ENST00000589444 NCAPD3P42695 1498 aa6.82□□□□□ -1.32
PTPN2-209ENST00000589444 TBX3O15119 743 aa6.82□□□□□ -1.32
PTPN2-209ENST00000589444 PTK7Q13308 1070 aa6.82□□□□□ -1.32
PTPN2-209ENST00000589444 SWI5Q1ZZU3 235 aa6.82□□□□□ -1.32
PTPN2-209ENST00000589444 NBPF6Q5VWK0 638 aa6.82□□□□□ -1.32
PTPN2-209ENST00000589444 METTL3Q86U44 580 aaKnown RBP6.82□□□□□ -1.32
PTPN2-209ENST00000589444 NBPF4Q96M43 638 aa6.82□□□□□ -1.32
PTPN2-209ENST00000589444 C12orf49Q9H741 205 aa6.82□□□□□ -1.32
PTPN2-209ENST00000589444 CCDC163A0A0D9SF12 145 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 PRMT3O60678 531 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 MYL1P05976 194 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 FAM200BP0CF97 657 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 ARHGAP4P98171 946 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 PPP4R4Q6NUP7 873 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 PLEKHM2Q8IWE5 1019 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 CKAP2LQ8IYA6 745 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 CHPFQ8IZ52 775 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 NFATC2IPQ8NCF5 419 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 ZNF700Q9H0M5 742 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 NPDC1Q9NQX5 325 aaPredicted RBP6.81□□□□□ -1.32
PTPN2-209ENST00000589444 NUTM2BA6NNL0 878 aaPredicted RBP6.81□□□□□ -1.32
PTPN2-209ENST00000589444 NUTM2EB1AL46 878 aaPredicted RBP6.81□□□□□ -1.32
PTPN2-209ENST00000589444 NR1I2O75469 434 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 GJA5P36382 358 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 MMP14P50281 582 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 TMEM95Q3KNT9 176 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 TBC1D10BQ4KMP7 808 aaPredicted RBP6.81□□□□□ -1.32
PTPN2-209ENST00000589444 NUTM2DQ5VT03 806 aaPredicted RBP6.81□□□□□ -1.32
PTPN2-209ENST00000589444 LARP1Q6PKG0 1096 aaKnown RBP6.81□□□□□ -1.32
PTPN2-209ENST00000589444 NUTM2AQ8IVF1 878 aaPredicted RBP6.81□□□□□ -1.32
PTPN2-209ENST00000589444 TTC30BQ8N4P2 665 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 VTI1BQ9UEU0 232 aa6.81□□□□□ -1.32
PTPN2-209ENST00000589444 NOL7Q9UMY1 257 aaKnown RBP6.81□□□□□ -1.32
PTPN2-209ENST00000589444 EXOSC10Q01780 885 aaKnown RBP6.8□□□□□ -1.32
PTPN2-209ENST00000589444 TAS1R3Q7RTX0 852 aa6.8□□□□□ -1.32
PTPN2-209ENST00000589444 RNF135Q8IUD6 432 aa6.8□□□□□ -1.32
PTPN2-209ENST00000589444 ZNF654Q8IZM8 581 aa6.8□□□□□ -1.32
PTPN2-209ENST00000589444 ATL2Q8NHH9 583 aa6.8□□□□□ -1.32
PTPN2-209ENST00000589444 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.8□□□□□ -1.32
PTPN2-209ENST00000589444 PUF60Q9UHX1 559 aaKnown RBP6.8□□□□□ -1.32
PTPN2-209ENST00000589444 DDX41Q9UJV9 622 aaKnown RBP6.8□□□□□ -1.32
PTPN2-209ENST00000589444 PCDHB15Q9Y5E8 787 aa6.8□□□□□ -1.32
PTPN2-209ENST00000589444 A6NJY4 79 aa6.8□□□□□ -1.32
PTPN2-209ENST00000589444 CBFA2T2O43439 604 aa6.8□□□□□ -1.32
PTPN2-209ENST00000589444 TRAPPC10P48553 1259 aa6.8□□□□□ -1.32
PTPN2-209ENST00000589444 ARSHQ5FYA8 562 aa6.8□□□□□ -1.32
PTPN2-209ENST00000589444 USP48Q86UV5 1035 aa6.8□□□□□ -1.32
PTPN2-209ENST00000589444 IFNL1Q8IU54 200 aa6.8□□□□□ -1.32
PTPN2-209ENST00000589444 MUC3BQ9H195 1237 aa6.8□□□□□ -1.32
PTPN2-209ENST00000589444 IGF1RP08069 1367 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms