RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 RIC3Q7Z5B4 369 aa8.13□□□□□ -1.11
LINC01539-202ENST00000589293 NUTM1Q86Y26 1132 aa8.13□□□□□ -1.11
LINC01539-202ENST00000589293 NWD2Q9ULI1 1742 aa8.12□□□□□ -1.11
LINC01539-202ENST00000589293 EVA1CP58658 441 aa8.12□□□□□ -1.11
LINC01539-202ENST00000589293 QPCTQ16769 361 aa8.12□□□□□ -1.11
LINC01539-202ENST00000589293 MORN1Q5T089 497 aa8.12□□□□□ -1.11
LINC01539-202ENST00000589293 DCAF11Q8TEB1 546 aa8.12□□□□□ -1.11
LINC01539-202ENST00000589293 RSPH6AQ9H0K4 717 aa8.12□□□□□ -1.11
LINC01539-202ENST00000589293 PLCH1Q4KWH8 1693 aa8.11□□□□□ -1.11
LINC01539-202ENST00000589293 WASLO00401 505 aaPredicted RBP8.11□□□□□ -1.11
LINC01539-202ENST00000589293 SLC4A3P48751 1232 aa8.11□□□□□ -1.11
LINC01539-202ENST00000589293 USP46P62068 366 aa8.11□□□□□ -1.11
LINC01539-202ENST00000589293 MMRN1Q13201 1228 aa8.11□□□□□ -1.11
LINC01539-202ENST00000589293 KMT5BQ4FZB7 885 aa8.11□□□□□ -1.11
LINC01539-202ENST00000589293 RNF166Q96A37 237 aaPredicted RBP8.11□□□□□ -1.11
LINC01539-202ENST00000589293 STRN4Q9NRL3 753 aa8.11□□□□□ -1.11
LINC01539-202ENST00000589293 DLC1Q96QB1 1528 aa8.11□□□□□ -1.11
LINC01539-202ENST00000589293 ATP6V1AP38606 617 aa8.1□□□□□ -1.11
LINC01539-202ENST00000589293 PDE3BQ13370 1112 aa8.1□□□□□ -1.11
LINC01539-202ENST00000589293 DIXDC1Q155Q3 683 aa8.1□□□□□ -1.11
LINC01539-202ENST00000589293 BLOC1S3Q6QNY0 202 aa8.1□□□□□ -1.11
LINC01539-202ENST00000589293 SLC27A5Q9Y2P5 690 aa8.1□□□□□ -1.11
LINC01539-202ENST00000589293 RGPD8O14715 1765 aaPredicted RBP8.1□□□□□ -1.11
LINC01539-202ENST00000589293 SPATA31A5Q5VU36 1347 aa8.09□□□□□ -1.11
LINC01539-202ENST00000589293 SPATA31A7Q8IWB4 1347 aa8.09□□□□□ -1.11
LINC01539-202ENST00000589293 BRWD3Q6RI45 1802 aa8.09□□□□□ -1.11
LINC01539-202ENST00000589293 FDX1P10109 184 aa8.09□□□□□ -1.11
LINC01539-202ENST00000589293 GJA5P36382 358 aa8.09□□□□□ -1.11
LINC01539-202ENST00000589293 TUSC1Q2TAM9 212 aa8.09□□□□□ -1.11
LINC01539-202ENST00000589293 FAM196AQ6ZSG2 479 aa8.09□□□□□ -1.11
LINC01539-202ENST00000589293 SYMPKQ92797 1274 aaKnown RBP8.09□□□□□ -1.11
LINC01539-202ENST00000589293 USP35Q9P2H5 1018 aa8.09□□□□□ -1.11
LINC01539-202ENST00000589293 COL14A1Q05707 1796 aaKnown RBP8.09□□□□□ -1.11
LINC01539-202ENST00000589293 TULP4Q9NRJ4 1543 aa8.08□□□□□ -1.12
LINC01539-202ENST00000589293 LILRB3O75022 631 aa8.08□□□□□ -1.12
LINC01539-202ENST00000589293 HRCP23327 699 aa8.08□□□□□ -1.12
LINC01539-202ENST00000589293 R3HDM1Q15032 1099 aaKnown RBP8.08□□□□□ -1.12
LINC01539-202ENST00000589293 CSPP1Q1MSJ5 1256 aa8.08□□□□□ -1.12
LINC01539-202ENST00000589293 NBPF8Q3BBV2 869 aa8.08□□□□□ -1.12
LINC01539-202ENST00000589293 NBPF14Q5TI25 921 aa8.08□□□□□ -1.12
LINC01539-202ENST00000589293 RNF19BQ6ZMZ0 732 aa8.08□□□□□ -1.12
LINC01539-202ENST00000589293 NECTIN2Q92692 538 aa8.08□□□□□ -1.12
LINC01539-202ENST00000589293 NUDT16Q96DE0 195 aaKnown RBP8.08□□□□□ -1.12
LINC01539-202ENST00000589293 PCMTD1Q96MG8 357 aaPredicted RBP8.08□□□□□ -1.12
LINC01539-202ENST00000589293 RAB3GAP2Q9H2M9 1393 aa8.08□□□□□ -1.12
LINC01539-202ENST00000589293 ADGRB2O60241 1585 aa8.07□□□□□ -1.12
LINC01539-202ENST00000589293 APBA3O96018 575 aa8.07□□□□□ -1.12
LINC01539-202ENST00000589293 ZC3H6P61129 1189 aaKnown RBP8.07□□□□□ -1.12
LINC01539-202ENST00000589293 CHRNA2Q15822 529 aa8.07□□□□□ -1.12
LINC01539-202ENST00000589293 RTL5Q5HYW3 569 aaPredicted RBP8.07□□□□□ -1.12
LINC01539-202ENST00000589293 FAM182BQ5T319 152 aa8.07□□□□□ -1.12
LINC01539-202ENST00000589293 NUTM2GQ5VZR2 741 aa8.07□□□□□ -1.12
LINC01539-202ENST00000589293 ABTB2Q8N961 1025 aa8.07□□□□□ -1.12
LINC01539-202ENST00000589293 THAP11Q96EK4 314 aa8.07□□□□□ -1.12
LINC01539-202ENST00000589293 PCDHB3Q9Y5E6 796 aa8.07□□□□□ -1.12
LINC01539-202ENST00000589293 KIAA0232Q92628 1395 aa8.07□□□□□ -1.12
LINC01539-202ENST00000589293 RGPD1P0DJD0 1748 aa8.06□□□□□ -1.12
LINC01539-202ENST00000589293 ABCA3Q99758 1704 aa8.06□□□□□ -1.12
LINC01539-202ENST00000589293 ZBTB7CA1YPR0 619 aa8.06□□□□□ -1.12
LINC01539-202ENST00000589293 C11orf95C9JLR9 678 aaPredicted RBP8.06□□□□□ -1.12
LINC01539-202ENST00000589293 TRIM37O94972 964 aa8.06□□□□□ -1.12
LINC01539-202ENST00000589293 COPS2P61201 443 aa8.06□□□□□ -1.12
LINC01539-202ENST00000589293 SRPK2P78362 688 aaKnown RBP8.06□□□□□ -1.12
LINC01539-202ENST00000589293 TJAP1Q5JTD0 557 aa8.06□□□□□ -1.12
LINC01539-202ENST00000589293 PPP2R2DQ66LE6 453 aa8.06□□□□□ -1.12
LINC01539-202ENST00000589293 CDK19Q9BWU1 502 aa8.06□□□□□ -1.12
LINC01539-202ENST00000589293 PPP1R1BQ9UD71 204 aaPredicted RBP8.06□□□□□ -1.12
LINC01539-202ENST00000589293 GTF3C3Q9Y5Q9 886 aa8.06□□□□□ -1.12
LINC01539-202ENST00000589293 EP400Q96L91 3159 aa8.06□□□□□ -1.12
LINC01539-202ENST00000589293 ATP7BP35670 1465 aa8.06□□□□□ -1.12
LINC01539-202ENST00000589293 SPATA31A1Q5TZJ5 1347 aa8.05□□□□□ -1.12
LINC01539-202ENST00000589293 PRR36Q9H6K5 1346 aa8.05□□□□□ -1.12
LINC01539-202ENST00000589293 LRP5O75197 1615 aa8.05□□□□□ -1.12
LINC01539-202ENST00000589293 EZH2Q15910 746 aaKnown RBP8.05□□□□□ -1.12
LINC01539-202ENST00000589293 NYAP1Q6ZVC0 841 aa8.05□□□□□ -1.12
LINC01539-202ENST00000589293 NLRP13Q86W25 1043 aa8.05□□□□□ -1.12
LINC01539-202ENST00000589293 SCUBE3Q8IX30 993 aa8.05□□□□□ -1.12
LINC01539-202ENST00000589293 ZNF516Q92618 1163 aa8.05□□□□□ -1.12
LINC01539-202ENST00000589293 MTRQ99707 1265 aa8.05□□□□□ -1.12
LINC01539-202ENST00000589293 PRR14Q9BWN1 585 aa8.05□□□□□ -1.12
LINC01539-202ENST00000589293 ITSN1Q15811 1721 aa8.05□□□□□ -1.12
LINC01539-202ENST00000589293 PARD3Q8TEW0 1356 aa8.05□□□□□ -1.12
LINC01539-202ENST00000589293 ACEP12821 1306 aa8.04□□□□□ -1.12
LINC01539-202ENST00000589293 NRAPQ86VF7 1730 aa8.04□□□□□ -1.12
LINC01539-202ENST00000589293 TLL1O43897 1013 aa8.04□□□□□ -1.12
LINC01539-202ENST00000589293 RFC5P40937 340 aa8.04□□□□□ -1.12
LINC01539-202ENST00000589293 BRICD5Q6PL45 260 aa8.04□□□□□ -1.12
LINC01539-202ENST00000589293 ADGRB1O14514 1584 aa8.04□□□□□ -1.12
LINC01539-202ENST00000589293 ALS2Q96Q42 1657 aa8.04□□□□□ -1.12
LINC01539-202ENST00000589293 TRPM3Q9HCF6 1732 aaPredicted RBP8.03□□□□□ -1.12
LINC01539-202ENST00000589293 SRCAPQ6ZRS2 3230 aa8.03□□□□□ -1.12
LINC01539-202ENST00000589293 CFAP99D6REC4 459 aa8.03□□□□□ -1.12
LINC01539-202ENST00000589293 PRPF38BQ5VTL8 546 aaKnown RBP8.03□□□□□ -1.12
LINC01539-202ENST00000589293 TCP11L2Q8N4U5 519 aa8.03□□□□□ -1.12
LINC01539-202ENST00000589293 THRAP3Q9Y2W1 955 aaKnown RBP8.03□□□□□ -1.12
LINC01539-202ENST00000589293 DISP2A7MBM2 1401 aa8.03□□□□□ -1.12
LINC01539-202ENST00000589293 GRIPAP1Q4V328 841 aa8.02□□□□□ -1.13
LINC01539-202ENST00000589293 SSH2Q76I76 1423 aa8.02□□□□□ -1.13
LINC01539-202ENST00000589293 MTMR2Q13614 643 aa8.01□□□□□ -1.13
LINC01539-202ENST00000589293 LARP1Q6PKG0 1096 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms