RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 NARFQ9UHQ1 456 aa28.75■■■□□ 2.19
NEDD4L-225ENST00000589054 GNAT3A8MTJ3 354 aa28.74■■■□□ 2.19
NEDD4L-225ENST00000589054 ZPR1O75312 459 aa28.74■■■□□ 2.19
NEDD4L-225ENST00000589054 NFIXQ14938 502 aa28.74■■■□□ 2.19
NEDD4L-225ENST00000589054 RSPH6AQ9H0K4 717 aa28.74■■■□□ 2.19
NEDD4L-225ENST00000589054 COL15A1P39059 1388 aa28.74■■■□□ 2.19
NEDD4L-225ENST00000589054 CEP350Q5VT06 3117 aa28.74■■■□□ 2.19
NEDD4L-225ENST00000589054 KIF3CO14782 793 aa28.73■■■□□ 2.19
NEDD4L-225ENST00000589054 CANXP27824 592 aaKnown RBP28.73■■■□□ 2.19
NEDD4L-225ENST00000589054 KCNQ3O43525 872 aa28.72■■■□□ 2.19
NEDD4L-225ENST00000589054 PRKAR2BP31323 418 aa28.72■■■□□ 2.19
NEDD4L-225ENST00000589054 GAS2L2Q8NHY3 880 aa28.72■■■□□ 2.19
NEDD4L-225ENST00000589054 BRCA1P38398 1863 aaKnown RBP28.72■■■□□ 2.19
NEDD4L-225ENST00000589054 UBR2Q8IWV8 1755 aa28.71■■■□□ 2.19
NEDD4L-225ENST00000589054 PPP2R1AP30153 589 aa28.71■■■□□ 2.19
NEDD4L-225ENST00000589054 ZNF790Q6PG37 636 aa28.71■■■□□ 2.19
NEDD4L-225ENST00000589054 PIM2Q9P1W9 311 aa28.71■■■□□ 2.19
NEDD4L-225ENST00000589054 EIF5P55010 431 aaKnown RBP28.7■■■□□ 2.18
NEDD4L-225ENST00000589054 CEMIPQ8WUJ3 1361 aa28.69■■■□□ 2.18
NEDD4L-225ENST00000589054 TEFQ10587 303 aa28.68■■■□□ 2.18
NEDD4L-225ENST00000589054 TTC5Q8N0Z6 440 aa28.68■■■□□ 2.18
NEDD4L-225ENST00000589054 HEG1Q9ULI3 1381 aa28.67■■■□□ 2.18
NEDD4L-225ENST00000589054 DALRD3Q5D0E6 543 aaKnown RBP28.66■■■□□ 2.18
NEDD4L-225ENST00000589054 SERPINB2P05120 415 aa28.65■■■□□ 2.18
NEDD4L-225ENST00000589054 STARD3NLO95772 234 aa28.64■■■□□ 2.18
NEDD4L-225ENST00000589054 A1BGP04217 495 aa28.64■■■□□ 2.18
NEDD4L-225ENST00000589054 C9orf131Q5VYM1 1079 aa28.64■■■□□ 2.18
NEDD4L-225ENST00000589054 SIPA1L3O60292 1781 aaPredicted RBP28.64■■■□□ 2.18
NEDD4L-225ENST00000589054 CARMIL3Q8ND23 1372 aa28.63■■■□□ 2.17
NEDD4L-225ENST00000589054 CFAP53Q96M91 514 aa28.63■■■□□ 2.17
NEDD4L-225ENST00000589054 PRAMEF22A3QJZ6 481 aa28.62■■■□□ 2.17
NEDD4L-225ENST00000589054 BICDL1Q6ZP65 573 aa28.62■■■□□ 2.17
NEDD4L-225ENST00000589054 TBC1D2BQ9UPU7 963 aa28.62■■■□□ 2.17
NEDD4L-225ENST00000589054 U2AF1L5P0DN76 240 aaPredicted RBP28.61■■■□□ 2.17
NEDD4L-225ENST00000589054 U2AF1Q01081 240 aaKnown RBP eCLIP28.61■■■□□ 2.173e-7■■■□□ 16.4
NEDD4L-225ENST00000589054 TBC1D9BQ66K14 1250 aa28.61■■■□□ 2.17
NEDD4L-225ENST00000589054 NMRK2Q9NPI5 230 aa28.61■■■□□ 2.17
NEDD4L-225ENST00000589054 AFDNP55196 1824 aaKnown RBP28.61■■■□□ 2.17
NEDD4L-225ENST00000589054 NRXN2Q9P2S2 1712 aa28.6■■■□□ 2.17
NEDD4L-225ENST00000589054 DCTN1Q14203 1278 aa28.6■■■□□ 2.17
NEDD4L-225ENST00000589054 MCM10Q7L590 875 aa28.6■■■□□ 2.17
NEDD4L-225ENST00000589054 BTBD11A6QL63 1104 aa28.59■■■□□ 2.17
NEDD4L-225ENST00000589054 HSPA6P17066 643 aa28.59■■■□□ 2.17
NEDD4L-225ENST00000589054 PRELPP51888 382 aa28.59■■■□□ 2.17
NEDD4L-225ENST00000589054 FMNL2Q96PY5 1086 aa28.59■■■□□ 2.17
NEDD4L-225ENST00000589054 USP16Q9Y5T5 823 aa28.59■■■□□ 2.17
NEDD4L-225ENST00000589054 ARFGEF1Q9Y6D6 1849 aa28.59■■■□□ 2.17
NEDD4L-225ENST00000589054 PIP4K2AP48426 406 aaPredicted RBP28.58■■■□□ 2.17
NEDD4L-225ENST00000589054 CCDC24Q8N4L8 307 aa28.58■■■□□ 2.17
NEDD4L-225ENST00000589054 TEX13AQ9BXU3 409 aaPredicted RBP28.57■■■□□ 2.16
NEDD4L-225ENST00000589054 NUDCQ9Y266 331 aa28.57■■■□□ 2.16
NEDD4L-225ENST00000589054 ZNF330Q9Y3S2 320 aaPredicted RBP28.57■■■□□ 2.16
NEDD4L-225ENST00000589054 A0A087WZG4 1122 aa28.55■■■□□ 2.16
NEDD4L-225ENST00000589054 IL6STP40189 918 aaPredicted RBP28.55■■■□□ 2.16
NEDD4L-225ENST00000589054 RASSF7Q02833 373 aa28.55■■■□□ 2.16
NEDD4L-225ENST00000589054 RNF181Q9P0P0 153 aa28.55■■■□□ 2.16
NEDD4L-225ENST00000589054 CAMTA2O94983 1202 aa28.54■■■□□ 2.16
NEDD4L-225ENST00000589054 C2CD5Q86YS7 1000 aa28.54■■■□□ 2.16
NEDD4L-225ENST00000589054 PRR5LQ6MZQ0 368 aa28.51■■■□□ 2.15
NEDD4L-225ENST00000589054 MIS18AQ9NYP9 233 aa28.5■■■□□ 2.15
NEDD4L-225ENST00000589054 TOMM70O94826 608 aa28.49■■■□□ 2.15
NEDD4L-225ENST00000589054 TTLL6Q8N841 843 aa28.49■■■□□ 2.15
NEDD4L-225ENST00000589054 SCN7AQ01118 1682 aa28.48■■■□□ 2.15
NEDD4L-225ENST00000589054 NBPF26B4DH59 902 aa28.47■■■□□ 2.15
NEDD4L-225ENST00000589054 H0YIN7 160 aa28.47■■■□□ 2.15
NEDD4L-225ENST00000589054 NBPF10Q6P3W6 841 aaKnown RBP28.47■■■□□ 2.15
NEDD4L-225ENST00000589054 NBPF15Q8N660 670 aa28.47■■■□□ 2.15
NEDD4L-225ENST00000589054 RTF1Q92541 710 aaKnown RBP28.47■■■□□ 2.15
NEDD4L-225ENST00000589054 NFKBIEO00221 500 aa28.46■■■□□ 2.15
NEDD4L-225ENST00000589054 DZIP3Q86Y13 1208 aaKnown RBP28.46■■■□□ 2.15
NEDD4L-225ENST00000589054 ANKRD31Q8N7Z5 1873 aa28.46■■■□□ 2.15
NEDD4L-225ENST00000589054 SBF1O95248 1867 aa28.45■■■□□ 2.15
NEDD4L-225ENST00000589054 SNRPA1P09661 255 aaKnown RBP28.45■■■□□ 2.14
NEDD4L-225ENST00000589054 PLEKHF1Q96S99 279 aa28.45■■■□□ 2.14
NEDD4L-225ENST00000589054 BRIP1Q9BX63 1249 aa28.45■■■□□ 2.14
NEDD4L-225ENST00000589054 HTATSF1O43719 755 aaKnown RBP28.44■■■□□ 2.14
NEDD4L-225ENST00000589054 RRAGCQ9HB90 399 aa28.44■■■□□ 2.14
NEDD4L-225ENST00000589054 DLEC1Q9Y238 1755 aa28.44■■■□□ 2.14
NEDD4L-225ENST00000589054 TAF7Q15545 349 aaPredicted RBP28.42■■■□□ 2.14
NEDD4L-225ENST00000589054 ZNF622Q969S3 477 aaKnown RBP eCLIP28.42■■■□□ 2.14
NEDD4L-225ENST00000589054 SETDB2Q96T68 719 aa28.42■■■□□ 2.14
NEDD4L-225ENST00000589054 ZNF219Q9P2Y4 722 aaPredicted RBP28.42■■■□□ 2.14
NEDD4L-225ENST00000589054 LMNB1P20700 586 aa28.4■■■□□ 2.14
NEDD4L-225ENST00000589054 THUMPD2Q9BTF0 503 aaKnown RBP28.4■■■□□ 2.14
NEDD4L-225ENST00000589054 C21orf2O43822 256 aa28.39■■■□□ 2.14
NEDD4L-225ENST00000589054 COL11A2P13942 1736 aaPredicted RBP28.39■■■□□ 2.14
NEDD4L-225ENST00000589054 PDE6BP35913 854 aa28.39■■■□□ 2.14
NEDD4L-225ENST00000589054 DNAJC5GQ8N7S2 189 aa28.39■■■□□ 2.14
NEDD4L-225ENST00000589054 CNBD1Q8NA66 436 aa28.38■■■□□ 2.13
NEDD4L-225ENST00000589054 RBM46Q8TBY0 533 aaKnown RBP28.38■■■□□ 2.13
NEDD4L-225ENST00000589054 KDM2BQ8NHM5 1336 aa28.38■■■□□ 2.13
NEDD4L-225ENST00000589054 BCORQ6W2J9 1755 aa28.37■■■□□ 2.13
NEDD4L-225ENST00000589054 HTRA3P83110 453 aa28.36■■■□□ 2.13
NEDD4L-225ENST00000589054 HLFQ16534 295 aa28.36■■■□□ 2.13
NEDD4L-225ENST00000589054 SRGNP10124 158 aa28.35■■■□□ 2.13
NEDD4L-225ENST00000589054 APLP1P51693 650 aa28.35■■■□□ 2.13
NEDD4L-225ENST00000589054 CLEC4GQ6UXB4 293 aa28.35■■■□□ 2.13
NEDD4L-225ENST00000589054 NPM2Q86SE8 214 aaKnown RBP28.35■■■□□ 2.13
NEDD4L-225ENST00000589054 GLTPD2A6NH11 291 aa28.33■■■□□ 2.13
NEDD4L-225ENST00000589054 NFE2L2Q16236 605 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms