RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 SLKQ9H2G2 1235 aaPredicted RBP18.83■□□□□ 0.61
MBD1-217ENST00000588937 ANTXR1Q9H6X2 564 aa18.83■□□□□ 0.61
MBD1-217ENST00000588937 EXOC6BQ9Y2D4 811 aa18.83■□□□□ 0.61
MBD1-217ENST00000588937 COL16A1Q07092 1604 aaPredicted RBP18.83■□□□□ 0.6
MBD1-217ENST00000588937 RAB11FIP3O75154 756 aa18.83■□□□□ 0.6
MBD1-217ENST00000588937 HSP90AB1P08238 724 aaKnown RBP18.83■□□□□ 0.6
MBD1-217ENST00000588937 SDSP20132 328 aa18.83■□□□□ 0.6
MBD1-217ENST00000588937 PDE1AP54750 535 aa18.83■□□□□ 0.6
MBD1-217ENST00000588937 SSH3Q8TE77 659 aa18.83■□□□□ 0.6
MBD1-217ENST00000588937 BCL11AQ9H165 835 aa18.83■□□□□ 0.6
MBD1-217ENST00000588937 SLC52A2Q9HAB3 445 aa18.83■□□□□ 0.6
MBD1-217ENST00000588937 PHLPP1O60346 1717 aa18.82■□□□□ 0.6
MBD1-217ENST00000588937 MEGF6O75095 1541 aa18.82■□□□□ 0.6
MBD1-217ENST00000588937 ALDH1L1O75891 902 aa18.81■□□□□ 0.6
MBD1-217ENST00000588937 DDX58O95786 925 aaKnown RBP18.81■□□□□ 0.6
MBD1-217ENST00000588937 PKD1L3Q7Z443 1732 aa18.81■□□□□ 0.6
MBD1-217ENST00000588937 ADCY9O60503 1353 aa18.81■□□□□ 0.6
MBD1-217ENST00000588937 ZNF790Q6PG37 636 aa18.81■□□□□ 0.6
MBD1-217ENST00000588937 KSR2Q6VAB6 950 aa18.81■□□□□ 0.6
MBD1-217ENST00000588937 KDM6AO15550 1401 aaPredicted RBP18.8■□□□□ 0.6
MBD1-217ENST00000588937 UBAP1LF5GYI3 381 aa18.8■□□□□ 0.6
MBD1-217ENST00000588937 POLA2Q14181 598 aa18.8■□□□□ 0.6
MBD1-217ENST00000588937 CHRNA2Q15822 529 aa18.8■□□□□ 0.6
MBD1-217ENST00000588937 DCAF5Q96JK2 942 aa18.8■□□□□ 0.6
MBD1-217ENST00000588937 DDX21Q9NR30 783 aaKnown RBP eCLIP18.8■□□□□ 0.6
MBD1-217ENST00000588937 AOX1Q06278 1338 aa18.79■□□□□ 0.6
MBD1-217ENST00000588937 SALL3Q9BXA9 1300 aa18.79■□□□□ 0.6
MBD1-217ENST00000588937 REC8O95072 547 aa18.78■□□□□ 0.6
MBD1-217ENST00000588937 MX1P20591 662 aa18.78■□□□□ 0.6
MBD1-217ENST00000588937 HSP90AB4PQ58FF6 505 aa18.78■□□□□ 0.6
MBD1-217ENST00000588937 PPP1R42Q7Z4L9 355 aa18.78■□□□□ 0.6
MBD1-217ENST00000588937 MRC1P22897 1456 aa18.78■□□□□ 0.6
MBD1-217ENST00000588937 FRAT2O75474 233 aaPredicted RBP18.78■□□□□ 0.6
MBD1-217ENST00000588937 ANXA1P04083 346 aa18.78■□□□□ 0.6
MBD1-217ENST00000588937 KIF2CQ99661 725 aa18.78■□□□□ 0.6
MBD1-217ENST00000588937 CHMP5Q9NZZ3 219 aa18.78■□□□□ 0.6
MBD1-217ENST00000588937 STAP2Q9UGK3 403 aa18.78■□□□□ 0.6
MBD1-217ENST00000588937 MAP3K2Q9Y2U5 619 aa18.78■□□□□ 0.6
MBD1-217ENST00000588937 SRGAP3O43295 1099 aa18.76■□□□□ 0.59
MBD1-217ENST00000588937 NBPF7P0C2Y1 421 aaPredicted RBP18.76■□□□□ 0.59
MBD1-217ENST00000588937 NFATC2IPQ8NCF5 419 aa18.76■□□□□ 0.59
MBD1-217ENST00000588937 PRDM11Q9NQV5 511 aa18.76■□□□□ 0.59
MBD1-217ENST00000588937 PARP4Q9UKK3 1724 aaKnown RBP18.76■□□□□ 0.59
MBD1-217ENST00000588937 SURF6O75683 361 aaKnown RBP18.76■□□□□ 0.59
MBD1-217ENST00000588937 TTC5Q8N0Z6 440 aa18.76■□□□□ 0.59
MBD1-217ENST00000588937 USP26Q9BXU7 913 aa18.76■□□□□ 0.59
MBD1-217ENST00000588937 C9orf78Q9NZ63 289 aaPredicted RBP18.76■□□□□ 0.59
MBD1-217ENST00000588937 TUBGCP6Q96RT7 1819 aa18.75■□□□□ 0.59
MBD1-217ENST00000588937 COL5A2P05997 1499 aaPredicted RBP18.75■□□□□ 0.59
MBD1-217ENST00000588937 ERC2O15083 957 aa18.75■□□□□ 0.59
MBD1-217ENST00000588937 RABEP1Q15276 862 aa18.75■□□□□ 0.59
MBD1-217ENST00000588937 KIF1BPQ96EK5 621 aa18.75■□□□□ 0.59
MBD1-217ENST00000588937 COL14A1Q05707 1796 aaKnown RBP18.75■□□□□ 0.59
MBD1-217ENST00000588937 MTX1Q13505 466 aa18.74■□□□□ 0.59
MBD1-217ENST00000588937 PROSER3Q2NL68 480 aa18.74■□□□□ 0.59
MBD1-217ENST00000588937 LINS1Q8NG48 757 aa18.74■□□□□ 0.59
MBD1-217ENST00000588937 WDR17Q8IZU2 1322 aa18.74■□□□□ 0.59
MBD1-217ENST00000588937 C5P01031 1676 aa18.74■□□□□ 0.59
MBD1-217ENST00000588937 PRAMEF22A3QJZ6 481 aa18.73■□□□□ 0.59
MBD1-217ENST00000588937 PIP4K2BP78356 416 aa18.73■□□□□ 0.59
MBD1-217ENST00000588937 CYP27B1O15528 508 aa18.73■□□□□ 0.59
MBD1-217ENST00000588937 SNRPA1P09661 255 aaKnown RBP18.73■□□□□ 0.59
MBD1-217ENST00000588937 SLC39A6Q13433 755 aa18.73■□□□□ 0.59
MBD1-217ENST00000588937 SPRYD3Q8NCJ5 442 aa18.73■□□□□ 0.59
MBD1-217ENST00000588937 PDIA6Q15084 440 aa18.72■□□□□ 0.59
MBD1-217ENST00000588937 LARP1Q6PKG0 1096 aaKnown RBP18.72■□□□□ 0.59
MBD1-217ENST00000588937 RHPN1Q8TCX5 695 aa18.72■□□□□ 0.59
MBD1-217ENST00000588937 FMNL2Q96PY5 1086 aa18.72■□□□□ 0.59
MBD1-217ENST00000588937 K7ELQ4 463 aaPredicted RBP18.71■□□□□ 0.59
MBD1-217ENST00000588937 CABP4P57796 275 aa18.71■□□□□ 0.59
MBD1-217ENST00000588937 CIZ1Q9ULV3 898 aaPredicted RBP18.71■□□□□ 0.59
MBD1-217ENST00000588937 NEXNQ0ZGT2 675 aa18.7■□□□□ 0.58
MBD1-217ENST00000588937 GSE1Q14687 1217 aa18.7■□□□□ 0.58
MBD1-217ENST00000588937 RIC3Q7Z5B4 369 aa18.7■□□□□ 0.58
MBD1-217ENST00000588937 UTYO14607 1347 aa18.7■□□□□ 0.58
MBD1-217ENST00000588937 PCDH11XQ9BZA7 1347 aa18.7■□□□□ 0.58
MBD1-217ENST00000588937 PCDH11YQ9BZA8 1340 aa18.7■□□□□ 0.58
MBD1-217ENST00000588937 TRIM6-TRIM34B2RNG4 842 aa18.7■□□□□ 0.58
MBD1-217ENST00000588937 GRM8O00222 908 aa18.7■□□□□ 0.58
MBD1-217ENST00000588937 TOM1L2Q6ZVM7 507 aa18.7■□□□□ 0.58
MBD1-217ENST00000588937 ERC1Q8IUD2 1116 aa18.7■□□□□ 0.58
MBD1-217ENST00000588937 ZNF496Q96IT1 587 aaPredicted RBP18.7■□□□□ 0.58
MBD1-217ENST00000588937 HSP90AA1P07900 732 aaKnown RBP18.69■□□□□ 0.58
MBD1-217ENST00000588937 AIMP1Q12904 312 aaKnown RBP18.69■□□□□ 0.58
MBD1-217ENST00000588937 IL1RAPL2Q9NP60 686 aa18.69■□□□□ 0.58
MBD1-217ENST00000588937 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
MBD1-217ENST00000588937 CARD10Q9BWT7 1032 aa18.68■□□□□ 0.58
MBD1-217ENST00000588937 LAMB4A4D0S4 1761 aa18.68■□□□□ 0.58
MBD1-217ENST00000588937 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
MBD1-217ENST00000588937 CWF19L2Q2TBE0 894 aaKnown RBP18.68■□□□□ 0.58
MBD1-217ENST00000588937 RILPL2Q969X0 211 aa18.68■□□□□ 0.58
MBD1-217ENST00000588937 MCCP23508 829 aa18.67■□□□□ 0.58
MBD1-217ENST00000588937 DDIT3P35638 169 aa18.67■□□□□ 0.58
MBD1-217ENST00000588937 TSHZ3Q63HK5 1081 aa18.67■□□□□ 0.58
MBD1-217ENST00000588937 ESYT1Q9BSJ8 1104 aa18.67■□□□□ 0.58
MBD1-217ENST00000588937 EPB41L2O43491 1005 aaKnown RBP18.66■□□□□ 0.58
MBD1-217ENST00000588937 MYL6BP14649 208 aa18.66■□□□□ 0.58
MBD1-217ENST00000588937 XAGE3Q8WTP9 111 aa18.66■□□□□ 0.58
MBD1-217ENST00000588937 METTL22Q9BUU2 404 aaPredicted RBP18.66■□□□□ 0.58
MBD1-217ENST00000588937 ERBB4Q15303 1308 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms