RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 KDM3BQ7LBC6 1761 aa25.34■■□□□ 1.65
CIRBP-220ENST00000588917 CYP19A1P11511 503 aaPredicted RBP25.34■■□□□ 1.65
CIRBP-220ENST00000588917 AK7Q96M32 723 aa25.34■■□□□ 1.65
CIRBP-220ENST00000588917 SYT17Q9BSW7 474 aa25.34■■□□□ 1.65
CIRBP-220ENST00000588917 FHDC1Q9C0D6 1143 aaPredicted RBP25.34■■□□□ 1.65
CIRBP-220ENST00000588917 ZNF827Q17R98 1081 aa25.33■■□□□ 1.65
CIRBP-220ENST00000588917 AKT1S1Q96B36 256 aa25.33■■□□□ 1.65
CIRBP-220ENST00000588917 CNTNAP4Q9C0A0 1308 aa25.33■■□□□ 1.64
CIRBP-220ENST00000588917 SLFN5Q08AF3 891 aa25.32■■□□□ 1.64
CIRBP-220ENST00000588917 FLAD1Q8NFF5 587 aa25.32■■□□□ 1.64
CIRBP-220ENST00000588917 TSR2Q969E8 191 aaKnown RBP25.32■■□□□ 1.64
CIRBP-220ENST00000588917 TFCP2L1Q9NZI6 479 aa25.32■■□□□ 1.64
CIRBP-220ENST00000588917 USP16Q9Y5T5 823 aa25.32■■□□□ 1.64
CIRBP-220ENST00000588917 ZBED9Q6R2W3 1325 aa25.32■■□□□ 1.64
CIRBP-220ENST00000588917 CCDC87Q9NVE4 849 aa25.31■■□□□ 1.64
CIRBP-220ENST00000588917 CRKLP46109 303 aaKnown RBP25.3■■□□□ 1.64
CIRBP-220ENST00000588917 ARXQ96QS3 562 aa25.3■■□□□ 1.64
CIRBP-220ENST00000588917 SPINK5Q9NQ38 1064 aaPredicted RBP25.3■■□□□ 1.64
CIRBP-220ENST00000588917 FANCIQ9NVI1 1328 aa25.3■■□□□ 1.64
CIRBP-220ENST00000588917 DUSP27Q5VZP5 1158 aa25.29■■□□□ 1.64
CIRBP-220ENST00000588917 RTCBQ9Y3I0 505 aaKnown RBP25.29■■□□□ 1.64
CIRBP-220ENST00000588917 CICQ96RK0 1608 aaPredicted RBP25.29■■□□□ 1.64
CIRBP-220ENST00000588917 RPS6KA4O75676 772 aa25.28■■□□□ 1.64
CIRBP-220ENST00000588917 INTS5Q6P9B9 1019 aaKnown RBP25.28■■□□□ 1.64
CIRBP-220ENST00000588917 NPM2Q86SE8 214 aaKnown RBP25.28■■□□□ 1.64
CIRBP-220ENST00000588917 PRAMEF22A3QJZ6 481 aa25.27■■□□□ 1.64
CIRBP-220ENST00000588917 GNPATO15228 680 aa25.27■■□□□ 1.64
CIRBP-220ENST00000588917 TRMT2AQ8IZ69 625 aaKnown RBP25.27■■□□□ 1.64
CIRBP-220ENST00000588917 C8orf58Q8NAV2 365 aa25.27■■□□□ 1.64
CIRBP-220ENST00000588917 SLC16A10Q8TF71 515 aa25.27■■□□□ 1.64
CIRBP-220ENST00000588917 C5P01031 1676 aa25.26■■□□□ 1.63
CIRBP-220ENST00000588917 SSFA2P28290 1259 aa25.26■■□□□ 1.63
CIRBP-220ENST00000588917 CDCA7LQ96GN5 454 aa25.26■■□□□ 1.63
CIRBP-220ENST00000588917 ERBB4Q15303 1308 aa25.26■■□□□ 1.63
CIRBP-220ENST00000588917 ELL2O00472 640 aaPredicted RBP25.25■■□□□ 1.63
CIRBP-220ENST00000588917 ADRA2BP18089 450 aa25.25■■□□□ 1.63
CIRBP-220ENST00000588917 EIF2S2P20042 333 aaKnown RBP25.25■■□□□ 1.63
CIRBP-220ENST00000588917 EXOSC9Q06265 439 aaKnown RBP25.25■■□□□ 1.63
CIRBP-220ENST00000588917 KRT24Q2M2I5 525 aa25.25■■□□□ 1.63
CIRBP-220ENST00000588917 TWISTNBQ3B726 338 aaPredicted RBP25.25■■□□□ 1.63
CIRBP-220ENST00000588917 TRAPPC3LQ5T215 181 aa25.25■■□□□ 1.63
CIRBP-220ENST00000588917 TAF1LQ8IZX4 1826 aa25.24■■□□□ 1.63
CIRBP-220ENST00000588917 C4BP0C0L5 1744 aa25.24■■□□□ 1.63
CIRBP-220ENST00000588917 TJP1Q07157 1748 aa25.24■■□□□ 1.63
CIRBP-220ENST00000588917 A1BGP04217 495 aa25.24■■□□□ 1.63
CIRBP-220ENST00000588917 CANXP27824 592 aaKnown RBP25.24■■□□□ 1.63
CIRBP-220ENST00000588917 IL6STP40189 918 aaPredicted RBP25.24■■□□□ 1.63
CIRBP-220ENST00000588917 HDGFL1Q5TGJ6 251 aa25.24■■□□□ 1.63
CIRBP-220ENST00000588917 A0A087WZG4 1122 aa25.22■■□□□ 1.63
CIRBP-220ENST00000588917 CCDC30Q5VVM6 783 aa25.22■■□□□ 1.63
CIRBP-220ENST00000588917 ZBTB1Q9Y2K1 713 aa25.22■■□□□ 1.63
CIRBP-220ENST00000588917 COL5A3P25940 1745 aaPredicted RBP25.21■■□□□ 1.63
CIRBP-220ENST00000588917 PNPLA7Q6ZV29 1317 aa25.21■■□□□ 1.63
CIRBP-220ENST00000588917 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.21■■□□□ 1.63
CIRBP-220ENST00000588917 DBF4Q9UBU7 674 aaPredicted RBP25.21■■□□□ 1.63
CIRBP-220ENST00000588917 UTRNP46939 3433 aa25.21■■□□□ 1.63
CIRBP-220ENST00000588917 POLD1P28340 1107 aa25.2■■□□□ 1.62
CIRBP-220ENST00000588917 EIF5P55010 431 aaKnown RBP25.2■■□□□ 1.62
CIRBP-220ENST00000588917 TSPYL6Q8N831 410 aa25.2■■□□□ 1.62
CIRBP-220ENST00000588917 VAMP4O75379 141 aa25.19■■□□□ 1.62
CIRBP-220ENST00000588917 CT47B1P0C2W7 299 aaPredicted RBP25.19■■□□□ 1.62
CIRBP-220ENST00000588917 RFC4P35249 363 aa25.19■■□□□ 1.62
CIRBP-220ENST00000588917 DDX21Q9NR30 783 aaKnown RBP eCLIP25.19■■□□□ 1.62
CIRBP-220ENST00000588917 MSH5O43196 834 aa25.18■■□□□ 1.62
CIRBP-220ENST00000588917 PHF14O94880 888 aa25.18■■□□□ 1.62
CIRBP-220ENST00000588917 ZNF428Q96B54 188 aa25.18■■□□□ 1.62
CIRBP-220ENST00000588917 NBPF26B4DH59 902 aa25.17■■□□□ 1.62
CIRBP-220ENST00000588917 NBPF10Q6P3W6 841 aaKnown RBP25.17■■□□□ 1.62
CIRBP-220ENST00000588917 NBPF15Q8N660 670 aa25.17■■□□□ 1.62
CIRBP-220ENST00000588917 NECTIN2Q92692 538 aa25.17■■□□□ 1.62
CIRBP-220ENST00000588917 ARHGEF1Q92888 912 aaKnown RBP25.17■■□□□ 1.62
CIRBP-220ENST00000588917 STK31Q9BXU1 1019 aa25.17■■□□□ 1.62
CIRBP-220ENST00000588917 COL23A1Q86Y22 540 aaPredicted RBP25.16■■□□□ 1.62
CIRBP-220ENST00000588917 YTHDC1Q96MU7 727 aaKnown RBP25.16■■□□□ 1.62
CIRBP-220ENST00000588917 HYPKQ9NX55 129 aa25.16■■□□□ 1.62
CIRBP-220ENST00000588917 ZPR1O75312 459 aa25.15■■□□□ 1.62
CIRBP-220ENST00000588917 MYL6BP14649 208 aa25.15■■□□□ 1.62
CIRBP-220ENST00000588917 ZNF330Q9Y3S2 320 aaPredicted RBP25.15■■□□□ 1.62
CIRBP-220ENST00000588917 LAMB4A4D0S4 1761 aa25.14■■□□□ 1.62
CIRBP-220ENST00000588917 PDIA6Q15084 440 aa25.14■■□□□ 1.62
CIRBP-220ENST00000588917 ZNF784Q8NCA9 323 aaPredicted RBP25.14■■□□□ 1.62
CIRBP-220ENST00000588917 CHPF2Q9P2E5 772 aa25.13■■□□□ 1.61
CIRBP-220ENST00000588917 NARFQ9UHQ1 456 aa25.13■■□□□ 1.61
CIRBP-220ENST00000588917 COL15A1P39059 1388 aa25.13■■□□□ 1.61
CIRBP-220ENST00000588917 GPR162Q16538 588 aa25.12■■□□□ 1.61
CIRBP-220ENST00000588917 AMIGO3Q86WK7 504 aa25.12■■□□□ 1.61
CIRBP-220ENST00000588917 KLHL34Q8N239 644 aa25.12■■□□□ 1.61
CIRBP-220ENST00000588917 MYH14Q7Z406 1995 aaKnown RBP25.11■■□□□ 1.61
CIRBP-220ENST00000588917 PIP4K2AP48426 406 aaPredicted RBP25.11■■□□□ 1.61
CIRBP-220ENST00000588917 QSER1Q2KHR3 1735 aa25.11■■□□□ 1.61
CIRBP-220ENST00000588917 RGL2O15211 777 aa25.1■■□□□ 1.61
CIRBP-220ENST00000588917 DZIP3Q86Y13 1208 aaKnown RBP25.1■■□□□ 1.61
CIRBP-220ENST00000588917 NLGN1Q8N2Q7 840 aa25.1■■□□□ 1.61
CIRBP-220ENST00000588917 UBR3Q6ZT12 1888 aa25.1■■□□□ 1.61
CIRBP-220ENST00000588917 SLC4A2P04920 1241 aa25.09■■□□□ 1.61
CIRBP-220ENST00000588917 KIF6Q6ZMV9 814 aa25.09■■□□□ 1.61
CIRBP-220ENST00000588917 SMIM5Q71RC9 77 aa25.09■■□□□ 1.61
CIRBP-220ENST00000588917 ALDH1L2Q3SY69 923 aa25.08■■□□□ 1.61
CIRBP-220ENST00000588917 COPS6Q7L5N1 327 aa25.08■■□□□ 1.61
CIRBP-220ENST00000588917 TBC1D2BQ9UPU7 963 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms