RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 KDM3BQ7LBC6 1761 aa25.59■■□□□ 1.69
CCDC130-209ENST00000588809 ARFGEF1Q9Y6D6 1849 aa25.58■■□□□ 1.69
CCDC130-209ENST00000588809 HTATSF1O43719 755 aaKnown RBP25.58■■□□□ 1.69
CCDC130-209ENST00000588809 STARD3NLO95772 234 aa25.57■■□□□ 1.68
CCDC130-209ENST00000588809 FKBP8Q14318 412 aa25.57■■□□□ 1.68
CCDC130-209ENST00000588809 ZNF784Q8NCA9 323 aaPredicted RBP25.57■■□□□ 1.68
CCDC130-209ENST00000588809 TEX13AQ9BXU3 409 aaPredicted RBP25.57■■□□□ 1.68
CCDC130-209ENST00000588809 LAMB4A4D0S4 1761 aa25.56■■□□□ 1.68
CCDC130-209ENST00000588809 RTF1Q92541 710 aaKnown RBP25.56■■□□□ 1.68
CCDC130-209ENST00000588809 FMNL2Q96PY5 1086 aa25.56■■□□□ 1.68
CCDC130-209ENST00000588809 PARP3Q9Y6F1 533 aa25.56■■□□□ 1.68
CCDC130-209ENST00000588809 BCORQ6W2J9 1755 aa25.56■■□□□ 1.68
CCDC130-209ENST00000588809 BTBD11A6QL63 1104 aa25.55■■□□□ 1.68
CCDC130-209ENST00000588809 ZPR1O75312 459 aa25.55■■□□□ 1.68
CCDC130-209ENST00000588809 TGFB2P61812 414 aa25.55■■□□□ 1.68
CCDC130-209ENST00000588809 DDX10Q13206 875 aaKnown RBP25.55■■□□□ 1.68
CCDC130-209ENST00000588809 MCM10Q7L590 875 aa25.55■■□□□ 1.68
CCDC130-209ENST00000588809 PLEKHF1Q96S99 279 aa25.55■■□□□ 1.68
CCDC130-209ENST00000588809 NARFQ9UHQ1 456 aa25.55■■□□□ 1.68
CCDC130-209ENST00000588809 DDR1Q08345 913 aa25.54■■□□□ 1.68
CCDC130-209ENST00000588809 DLEC1Q9Y238 1755 aa25.54■■□□□ 1.68
CCDC130-209ENST00000588809 TM4SF1P30408 202 aa25.53■■□□□ 1.68
CCDC130-209ENST00000588809 EIF5P55010 431 aaKnown RBP25.53■■□□□ 1.68
CCDC130-209ENST00000588809 USPL1Q5W0Q7 1092 aa25.53■■□□□ 1.68
CCDC130-209ENST00000588809 KCNQ3O43525 872 aa25.52■■□□□ 1.68
CCDC130-209ENST00000588809 NEFMP07197 916 aa25.51■■□□□ 1.67
CCDC130-209ENST00000588809 POLRMTO00411 1230 aaKnown RBP25.5■■□□□ 1.67
CCDC130-209ENST00000588809 CANXP27824 592 aaKnown RBP25.5■■□□□ 1.67
CCDC130-209ENST00000588809 DCTN1Q14203 1278 aa25.5■■□□□ 1.67
CCDC130-209ENST00000588809 PNNQ9H307 717 aaKnown RBP25.49■■□□□ 1.67
CCDC130-209ENST00000588809 BCL2L12Q9HB09 334 aa25.49■■□□□ 1.67
CCDC130-209ENST00000588809 MYBBP1AQ9BQG0 1328 aaKnown RBP25.48■■□□□ 1.67
CCDC130-209ENST00000588809 IL6STP40189 918 aaPredicted RBP25.48■■□□□ 1.67
CCDC130-209ENST00000588809 A0A087WZG4 1122 aa25.47■■□□□ 1.67
CCDC130-209ENST00000588809 A0A0G2JLW4 131 aa25.47■■□□□ 1.67
CCDC130-209ENST00000588809 NFE2L2Q16236 605 aa25.47■■□□□ 1.67
CCDC130-209ENST00000588809 ANKRD31Q8N7Z5 1873 aa25.47■■□□□ 1.67
CCDC130-209ENST00000588809 NFIXQ14938 502 aa25.46■■□□□ 1.67
CCDC130-209ENST00000588809 TAF7Q15545 349 aaPredicted RBP25.46■■□□□ 1.67
CCDC130-209ENST00000588809 WWC3Q9ULE0 1092 aa25.46■■□□□ 1.67
CCDC130-209ENST00000588809 DPEP1P16444 411 aa25.45■■□□□ 1.66
CCDC130-209ENST00000588809 KCNA3P22001 575 aa25.45■■□□□ 1.66
CCDC130-209ENST00000588809 ADCY9O60503 1353 aa25.44■■□□□ 1.66
CCDC130-209ENST00000588809 MAPK8IP3Q9UPT6 1336 aa25.44■■□□□ 1.66
CCDC130-209ENST00000588809 A1BGP04217 495 aa25.43■■□□□ 1.66
CCDC130-209ENST00000588809 SNRPA1P09661 255 aaKnown RBP25.43■■□□□ 1.66
CCDC130-209ENST00000588809 USP16Q9Y5T5 823 aa25.43■■□□□ 1.66
CCDC130-209ENST00000588809 PRAMEF22A3QJZ6 481 aa25.41■■□□□ 1.66
CCDC130-209ENST00000588809 SBF1O95248 1867 aa25.4■■□□□ 1.66
CCDC130-209ENST00000588809 PNISRQ8TF01 805 aaKnown RBP25.4■■□□□ 1.66
CCDC130-209ENST00000588809 BCS1LQ9Y276 419 aa25.4■■□□□ 1.66
CCDC130-209ENST00000588809 TBC1D2BQ9UPU7 963 aa25.39■■□□□ 1.66
CCDC130-209ENST00000588809 SERPINB2P05120 415 aa25.38■■□□□ 1.65
CCDC130-209ENST00000588809 ATP10DQ9P241 1426 aa25.37■■□□□ 1.65
CCDC130-209ENST00000588809 COL11A2P13942 1736 aaPredicted RBP25.37■■□□□ 1.65
CCDC130-209ENST00000588809 CAMTA2O94983 1202 aa25.37■■□□□ 1.65
CCDC130-209ENST00000588809 MIS18AQ9NYP9 233 aa25.37■■□□□ 1.65
CCDC130-209ENST00000588809 PIM2Q9P1W9 311 aa25.37■■□□□ 1.65
CCDC130-209ENST00000588809 ZNF330Q9Y3S2 320 aaPredicted RBP25.37■■□□□ 1.65
CCDC130-209ENST00000588809 NUP98P52948 1817 aa25.37■■□□□ 1.65
CCDC130-209ENST00000588809 TBC1D9BQ66K14 1250 aa25.36■■□□□ 1.65
CCDC130-209ENST00000588809 NPM2Q86SE8 214 aaKnown RBP25.36■■□□□ 1.65
CCDC130-209ENST00000588809 THUMPD2Q9BTF0 503 aaKnown RBP25.36■■□□□ 1.65
CCDC130-209ENST00000588809 PRKRIP1Q9H875 184 aaPredicted RBP25.36■■□□□ 1.65
CCDC130-209ENST00000588809 CARMIL3Q8ND23 1372 aa25.35■■□□□ 1.65
CCDC130-209ENST00000588809 CHRNA5P30532 468 aa25.35■■□□□ 1.65
CCDC130-209ENST00000588809 NBPF26B4DH59 902 aa25.34■■□□□ 1.65
CCDC130-209ENST00000588809 ZEB1P37275 1124 aaPredicted RBP25.34■■□□□ 1.65
CCDC130-209ENST00000588809 NBPF10Q6P3W6 841 aaKnown RBP25.34■■□□□ 1.65
CCDC130-209ENST00000588809 DZIP3Q86Y13 1208 aaKnown RBP25.34■■□□□ 1.65
CCDC130-209ENST00000588809 NBPF15Q8N660 670 aa25.34■■□□□ 1.65
CCDC130-209ENST00000588809 ARFGEF2Q9Y6D5 1785 aa25.33■■□□□ 1.65
CCDC130-209ENST00000588809 TMPOP42166 694 aaKnown RBP25.33■■□□□ 1.65
CCDC130-209ENST00000588809 PIP4K2AP48426 406 aaPredicted RBP25.33■■□□□ 1.65
CCDC130-209ENST00000588809 CACNA1SQ13698 1873 aa25.33■■□□□ 1.65
CCDC130-209ENST00000588809 DALRD3Q5D0E6 543 aaKnown RBP25.33■■□□□ 1.65
CCDC130-209ENST00000588809 CCDC88AQ3V6T2 1871 aa25.32■■□□□ 1.64
CCDC130-209ENST00000588809 RGL2O15211 777 aa25.32■■□□□ 1.64
CCDC130-209ENST00000588809 GIGYF1O75420 1035 aaPredicted RBP25.32■■□□□ 1.64
CCDC130-209ENST00000588809 RIPK4P57078 832 aa25.32■■□□□ 1.64
CCDC130-209ENST00000588809 EIF4A1P60842 406 aaKnown RBP25.32■■□□□ 1.64
CCDC130-209ENST00000588809 BICDL1Q6ZP65 573 aa25.32■■□□□ 1.64
CCDC130-209ENST00000588809 CLEC4GQ6UXB4 293 aa25.31■■□□□ 1.64
CCDC130-209ENST00000588809 LMOD3Q0VAK6 560 aa25.29■■□□□ 1.64
CCDC130-209ENST00000588809 BABAM1Q9NWV8 329 aa25.29■■□□□ 1.64
CCDC130-209ENST00000588809 CEP350Q5VT06 3117 aa25.29■■□□□ 1.64
CCDC130-209ENST00000588809 WDR43Q15061 677 aaKnown RBP eCLIP25.28■■□□□ 1.64
CCDC130-209ENST00000588809 PRR5LQ6MZQ0 368 aa25.28■■□□□ 1.64
CCDC130-209ENST00000588809 ARHGAP27Q6ZUM4 889 aa25.28■■□□□ 1.64
CCDC130-209ENST00000588809 SETDB2Q96T68 719 aa25.28■■□□□ 1.64
CCDC130-209ENST00000588809 RUNDC1Q96C34 613 aa25.27■■□□□ 1.64
CCDC130-209ENST00000588809 BRIP1Q9BX63 1249 aa25.27■■□□□ 1.64
CCDC130-209ENST00000588809 FER1L6Q2WGJ9 1857 aa25.27■■□□□ 1.64
CCDC130-209ENST00000588809 CCDC146Q8IYE0 955 aa25.26■■□□□ 1.63
CCDC130-209ENST00000588809 ADAMTS8Q9UP79 889 aa25.26■■□□□ 1.63
CCDC130-209ENST00000588809 PDZRN3Q9UPQ7 1066 aa25.26■■□□□ 1.63
CCDC130-209ENST00000588809 ZNF652Q9Y2D9 606 aa25.26■■□□□ 1.63
CCDC130-209ENST00000588809 C1QTNF8P60827 252 aa25.25■■□□□ 1.63
CCDC130-209ENST00000588809 TSPYL4Q9UJ04 414 aa25.25■■□□□ 1.63
CCDC130-209ENST00000588809 DICER1Q9UPY3 1922 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms