RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 TBC1D32Q96NH3 1257 aa13.76□□□□□ -0.21
BCAS3-220ENST00000588720 HOXB7P09629 217 aa13.76□□□□□ -0.21
BCAS3-220ENST00000588720 NOM1Q5C9Z4 860 aaKnown RBP13.76□□□□□ -0.21
BCAS3-220ENST00000588720 TTC22Q5TAA0 569 aa13.76□□□□□ -0.21
BCAS3-220ENST00000588720 TBC1D9Q6ZT07 1266 aa13.76□□□□□ -0.21
BCAS3-220ENST00000588720 DCAF5Q96JK2 942 aa13.76□□□□□ -0.21
BCAS3-220ENST00000588720 CWC27Q6UX04 472 aaKnown RBP13.75□□□□□ -0.21
BCAS3-220ENST00000588720 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
BCAS3-220ENST00000588720 KIAA0232Q92628 1395 aa13.75□□□□□ -0.21
BCAS3-220ENST00000588720 NEXMIFQ5QGS0 1516 aa13.75□□□□□ -0.21
BCAS3-220ENST00000588720 CPLX1O14810 134 aa13.75□□□□□ -0.21
BCAS3-220ENST00000588720 ATP8B2P98198 1209 aa13.75□□□□□ -0.21
BCAS3-220ENST00000588720 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
BCAS3-220ENST00000588720 ZC3H13Q5T200 1668 aaKnown RBP13.75□□□□□ -0.21
BCAS3-220ENST00000588720 QRICH2Q9H0J4 1663 aa13.75□□□□□ -0.21
BCAS3-220ENST00000588720 TTC39AQ5SRH9 613 aa13.75□□□□□ -0.21
BCAS3-220ENST00000588720 TEX35Q5T0J7 233 aa13.75□□□□□ -0.21
BCAS3-220ENST00000588720 CEP85Q6P2H3 762 aa13.75□□□□□ -0.21
BCAS3-220ENST00000588720 VPS37CA5D8V6 355 aaPredicted RBP13.74□□□□□ -0.21
BCAS3-220ENST00000588720 SF3A1Q15459 793 aaKnown RBP13.74□□□□□ -0.21
BCAS3-220ENST00000588720 NFATC2IPQ8NCF5 419 aa13.74□□□□□ -0.21
BCAS3-220ENST00000588720 NRXN1Q9ULB1 1477 aa13.74□□□□□ -0.21
BCAS3-220ENST00000588720 GPS2Q13227 327 aa13.74□□□□□ -0.21
BCAS3-220ENST00000588720 MCTP1Q6DN14 999 aa13.74□□□□□ -0.21
BCAS3-220ENST00000588720 KIAA1210Q9ULL0 1709 aa13.74□□□□□ -0.21
BCAS3-220ENST00000588720 CYP46A1Q9Y6A2 500 aa13.74□□□□□ -0.21
BCAS3-220ENST00000588720 ZNF771Q7L3S4 317 aaPredicted RBP13.74□□□□□ -0.21
BCAS3-220ENST00000588720 DEPDC5O75140 1603 aa13.73□□□□□ -0.21
BCAS3-220ENST00000588720 IL2RBP14784 551 aa13.73□□□□□ -0.21
BCAS3-220ENST00000588720 CDK12Q9NYV4 1490 aaPredicted RBP13.73□□□□□ -0.21
BCAS3-220ENST00000588720 HSP90AB3PQ58FF7 597 aa13.73□□□□□ -0.21
BCAS3-220ENST00000588720 COPS6Q7L5N1 327 aa13.73□□□□□ -0.21
BCAS3-220ENST00000588720 XAGE3Q8WTP9 111 aa13.73□□□□□ -0.21
BCAS3-220ENST00000588720 LINS1Q8NG48 757 aa13.73□□□□□ -0.21
BCAS3-220ENST00000588720 MPHOSPH8Q99549 860 aa13.73□□□□□ -0.21
BCAS3-220ENST00000588720 DIP2BQ9P265 1576 aa13.72□□□□□ -0.21
BCAS3-220ENST00000588720 G2E3Q7L622 706 aa13.72□□□□□ -0.21
BCAS3-220ENST00000588720 RHPN1Q8TCX5 695 aa13.72□□□□□ -0.21
BCAS3-220ENST00000588720 CCDC34Q96HJ3 373 aa13.72□□□□□ -0.21
BCAS3-220ENST00000588720 NOL10Q9BSC4 688 aaKnown RBP13.72□□□□□ -0.21
BCAS3-220ENST00000588720 ECHDC1Q9NTX5 307 aa13.72□□□□□ -0.21
BCAS3-220ENST00000588720 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.72□□□□□ -0.21
BCAS3-220ENST00000588720 NEURL4Q96JN8 1562 aa13.72□□□□□ -0.21
BCAS3-220ENST00000588720 CLTCQ00610 1675 aaKnown RBP13.72□□□□□ -0.21
BCAS3-220ENST00000588720 UBE3BQ7Z3V4 1068 aa13.72□□□□□ -0.21
BCAS3-220ENST00000588720 TBC1D2Q9BYX2 928 aa13.72□□□□□ -0.21
BCAS3-220ENST00000588720 ZBTB3Q9H5J0 574 aa13.72□□□□□ -0.21
BCAS3-220ENST00000588720 TULP4Q9NRJ4 1543 aa13.72□□□□□ -0.21
BCAS3-220ENST00000588720 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.21
BCAS3-220ENST00000588720 GRM8O00222 908 aa13.71□□□□□ -0.21
BCAS3-220ENST00000588720 TRAK2O60296 914 aa13.71□□□□□ -0.21
BCAS3-220ENST00000588720 DRC7Q8IY82 874 aa13.71□□□□□ -0.21
BCAS3-220ENST00000588720 LGR6Q9HBX8 967 aa13.71□□□□□ -0.21
BCAS3-220ENST00000588720 POLR1AO95602 1720 aaPredicted RBP13.71□□□□□ -0.21
BCAS3-220ENST00000588720 FAM13BQ9NYF5 915 aa13.71□□□□□ -0.21
BCAS3-220ENST00000588720 IGSF1Q8N6C5 1336 aa13.71□□□□□ -0.21
BCAS3-220ENST00000588720 AKAP17AQ02040 695 aaKnown RBP13.71□□□□□ -0.21
BCAS3-220ENST00000588720 CWC25Q9NXE8 425 aaPredicted RBP13.71□□□□□ -0.21
BCAS3-220ENST00000588720 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.22
BCAS3-220ENST00000588720 ATP5J2-PTCD1G3V325 749 aa13.71□□□□□ -0.22
BCAS3-220ENST00000588720 PDCP20941 246 aa13.71□□□□□ -0.22
BCAS3-220ENST00000588720 PDE1AP54750 535 aa13.71□□□□□ -0.22
BCAS3-220ENST00000588720 ANKRD1Q15327 319 aa13.71□□□□□ -0.22
BCAS3-220ENST00000588720 AKAP2Q9Y2D5 859 aa13.71□□□□□ -0.22
BCAS3-220ENST00000588720 HMGN5P82970 282 aaKnown RBP13.7□□□□□ -0.22
BCAS3-220ENST00000588720 AMOTL1Q8IY63 956 aa13.7□□□□□ -0.22
BCAS3-220ENST00000588720 TSPYL1Q9H0U9 437 aa13.7□□□□□ -0.22
BCAS3-220ENST00000588720 PHAXQ9H814 394 aaKnown RBP13.7□□□□□ -0.22
BCAS3-220ENST00000588720 CCDC8Q9H0W5 538 aaPredicted RBP13.7□□□□□ -0.22
BCAS3-220ENST00000588720 BOLA2Q9H3K6 86 aa13.7□□□□□ -0.22
BCAS3-220ENST00000588720 DDX21Q9NR30 783 aaKnown RBP eCLIP13.7□□□□□ -0.22
BCAS3-220ENST00000588720 MED14O60244 1454 aa13.7□□□□□ -0.22
BCAS3-220ENST00000588720 PTPRMP28827 1452 aa13.7□□□□□ -0.22
BCAS3-220ENST00000588720 SDSP20132 328 aa13.7□□□□□ -0.22
BCAS3-220ENST00000588720 FKBP4Q02790 459 aaKnown RBP eCLIP13.7□□□□□ -0.22
BCAS3-220ENST00000588720 CCDC85AQ96PX6 553 aaPredicted RBP13.7□□□□□ -0.22
BCAS3-220ENST00000588720 TMEM94Q12767 1356 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 PIK3C2BO00750 1634 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 SLAIN2Q9P270 581 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 ZNF790Q6PG37 636 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 NFXL1Q6ZNB6 911 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 ARHGEF40Q8TER5 1519 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 FRMPD1Q5SYB0 1578 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 ERICH2A1L162 156 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 IFIT5Q13325 482 aaKnown RBP13.69□□□□□ -0.22
BCAS3-220ENST00000588720 TRIM29Q14134 588 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 ZSCAN25Q6NSZ9 544 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 BLOC1S2Q6QNY1 142 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 IL17REQ8NFR9 667 aa13.69□□□□□ -0.22
BCAS3-220ENST00000588720 PCDH11XQ9BZA7 1347 aa13.68□□□□□ -0.22
BCAS3-220ENST00000588720 PCDH11YQ9BZA8 1340 aa13.68□□□□□ -0.22
BCAS3-220ENST00000588720 KRT32Q14532 448 aa13.68□□□□□ -0.22
BCAS3-220ENST00000588720 NGLY1Q96IV0 654 aa13.68□□□□□ -0.22
BCAS3-220ENST00000588720 GNL3LQ9NVN8 582 aaKnown RBP13.68□□□□□ -0.22
BCAS3-220ENST00000588720 ZNF652Q9Y2D9 606 aa13.68□□□□□ -0.22
BCAS3-220ENST00000588720 RTL1A6NKG5 1358 aa13.68□□□□□ -0.22
BCAS3-220ENST00000588720 DLC1Q96QB1 1528 aa13.68□□□□□ -0.22
BCAS3-220ENST00000588720 ABCC4O15439 1325 aa13.68□□□□□ -0.22
BCAS3-220ENST00000588720 TOM1O60784 492 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms