RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 GRIN3BO60391 1043 aa19.16■□□□□ 0.66
DDX39A-208ENST00000588692 MCM10Q7L590 875 aa19.16■□□□□ 0.66
DDX39A-208ENST00000588692 PLEKHF1Q96S99 279 aa19.16■□□□□ 0.66
DDX39A-208ENST00000588692 GOLGB1Q14789 3259 aaKnown RBP19.16■□□□□ 0.66
DDX39A-208ENST00000588692 ZPR1O75312 459 aa19.16■□□□□ 0.66
DDX39A-208ENST00000588692 SRP68Q9UHB9 627 aaKnown RBP19.16■□□□□ 0.66
DDX39A-208ENST00000588692 PARP3Q9Y6F1 533 aa19.16■□□□□ 0.66
DDX39A-208ENST00000588692 KIAA1551Q9HCM1 1747 aa19.15■□□□□ 0.66
DDX39A-208ENST00000588692 MAPK8IP3Q9UPT6 1336 aa19.15■□□□□ 0.66
DDX39A-208ENST00000588692 YBX3P16989 372 aaKnown RBP eCLIP19.14■□□□□ 0.652e-7■□□□□ 10
DDX39A-208ENST00000588692 NARFQ9UHQ1 456 aa19.14■□□□□ 0.65
DDX39A-208ENST00000588692 FKBP8Q14318 412 aa19.13■□□□□ 0.65
DDX39A-208ENST00000588692 NFE2L2Q16236 605 aa19.13■□□□□ 0.65
DDX39A-208ENST00000588692 PXDNLA1KZ92 1463 aa19.13■□□□□ 0.65
DDX39A-208ENST00000588692 SCN7AQ01118 1682 aa19.12■□□□□ 0.65
DDX39A-208ENST00000588692 A0A087WZG4 1122 aa19.12■□□□□ 0.65
DDX39A-208ENST00000588692 CANXP27824 592 aaKnown RBP19.12■□□□□ 0.65
DDX39A-208ENST00000588692 TGFB2P61812 414 aa19.12■□□□□ 0.65
DDX39A-208ENST00000588692 DCTN1Q14203 1278 aa19.12■□□□□ 0.65
DDX39A-208ENST00000588692 USPL1Q5W0Q7 1092 aa19.12■□□□□ 0.65
DDX39A-208ENST00000588692 KCNQ3O43525 872 aa19.11■□□□□ 0.65
DDX39A-208ENST00000588692 EIF5P55010 431 aaKnown RBP19.11■□□□□ 0.65
DDX39A-208ENST00000588692 KDM3BQ7LBC6 1761 aa19.11■□□□□ 0.65
DDX39A-208ENST00000588692 N4BP2Q86UW6 1770 aaPredicted RBP19.11■□□□□ 0.65
DDX39A-208ENST00000588692 IL6STP40189 918 aaPredicted RBP19.1■□□□□ 0.65
DDX39A-208ENST00000588692 TAF7Q15545 349 aaPredicted RBP19.1■□□□□ 0.65
DDX39A-208ENST00000588692 LAMB4A4D0S4 1761 aa19.1■□□□□ 0.65
DDX39A-208ENST00000588692 TM4SF1P30408 202 aa19.09■□□□□ 0.65
DDX39A-208ENST00000588692 DDR1Q08345 913 aa19.09■□□□□ 0.65
DDX39A-208ENST00000588692 PNISRQ8TF01 805 aaKnown RBP19.09■□□□□ 0.65
DDX39A-208ENST00000588692 BRCA1P38398 1863 aaKnown RBP19.09■□□□□ 0.65
DDX39A-208ENST00000588692 NRXN2Q9P2S2 1712 aa19.09■□□□□ 0.65
DDX39A-208ENST00000588692 SNRPA1P09661 255 aaKnown RBP19.09■□□□□ 0.65
DDX39A-208ENST00000588692 PRKRIP1Q9H875 184 aaPredicted RBP19.09■□□□□ 0.65
DDX39A-208ENST00000588692 POLRMTO00411 1230 aaKnown RBP19.08■□□□□ 0.64
DDX39A-208ENST00000588692 NPM2Q86SE8 214 aaKnown RBP19.08■□□□□ 0.64
DDX39A-208ENST00000588692 AFDNP55196 1824 aaKnown RBP19.08■□□□□ 0.64
DDX39A-208ENST00000588692 BCORQ6W2J9 1755 aa19.07■□□□□ 0.64
DDX39A-208ENST00000588692 BCL2L12Q9HB09 334 aa19.06■□□□□ 0.64
DDX39A-208ENST00000588692 A1BGP04217 495 aa19.05■□□□□ 0.64
DDX39A-208ENST00000588692 NFIXQ14938 502 aa19.05■□□□□ 0.64
DDX39A-208ENST00000588692 WDR43Q15061 677 aaKnown RBP eCLIP19.05■□□□□ 0.64
DDX39A-208ENST00000588692 ZNF784Q8NCA9 323 aaPredicted RBP19.05■□□□□ 0.64
DDX39A-208ENST00000588692 USP16Q9Y5T5 823 aa19.05■□□□□ 0.64
DDX39A-208ENST00000588692 LMOD3Q0VAK6 560 aa19.04■□□□□ 0.64
DDX39A-208ENST00000588692 ZNF330Q9Y3S2 320 aaPredicted RBP19.04■□□□□ 0.64
DDX39A-208ENST00000588692 ARFGEF1Q9Y6D6 1849 aa19.03■□□□□ 0.64
DDX39A-208ENST00000588692 A0A0G2JLW4 131 aa19.03■□□□□ 0.64
DDX39A-208ENST00000588692 DPEP1P16444 411 aa19.03■□□□□ 0.64
DDX39A-208ENST00000588692 PRAMEF22A3QJZ6 481 aa19.03■□□□□ 0.64
DDX39A-208ENST00000588692 RIPK4P57078 832 aa19.03■□□□□ 0.64
DDX39A-208ENST00000588692 WWC3Q9ULE0 1092 aa19.03■□□□□ 0.64
DDX39A-208ENST00000588692 TMPOP42166 694 aaKnown RBP19.02■□□□□ 0.63
DDX39A-208ENST00000588692 THUMPD2Q9BTF0 503 aaKnown RBP19.02■□□□□ 0.63
DDX39A-208ENST00000588692 MIS18AQ9NYP9 233 aa19.02■□□□□ 0.63
DDX39A-208ENST00000588692 TBC1D2BQ9UPU7 963 aa19.02■□□□□ 0.63
DDX39A-208ENST00000588692 SERPINB2P05120 415 aa19.01■□□□□ 0.63
DDX39A-208ENST00000588692 RUNDC1Q96C34 613 aa19.01■□□□□ 0.63
DDX39A-208ENST00000588692 DLEC1Q9Y238 1755 aa19.01■□□□□ 0.63
DDX39A-208ENST00000588692 CAMTA2O94983 1202 aa19■□□□□ 0.63
DDX39A-208ENST00000588692 DZIP3Q86Y13 1208 aaKnown RBP19■□□□□ 0.63
DDX39A-208ENST00000588692 BABAM1Q9NWV8 329 aa19■□□□□ 0.63
DDX39A-208ENST00000588692 BCS1LQ9Y276 419 aa19■□□□□ 0.63
DDX39A-208ENST00000588692 CARMIL3Q8ND23 1372 aa19■□□□□ 0.63
DDX39A-208ENST00000588692 KCNA3P22001 575 aa18.99■□□□□ 0.63
DDX39A-208ENST00000588692 EIF4A1P60842 406 aaKnown RBP18.99■□□□□ 0.63
DDX39A-208ENST00000588692 PIM2Q9P1W9 311 aa18.99■□□□□ 0.63
DDX39A-208ENST00000588692 RGL2O15211 777 aa18.98■□□□□ 0.63
DDX39A-208ENST00000588692 GIGYF1O75420 1035 aaPredicted RBP18.98■□□□□ 0.63
DDX39A-208ENST00000588692 TBC1D9BQ66K14 1250 aa18.98■□□□□ 0.63
DDX39A-208ENST00000588692 CCDC146Q8IYE0 955 aa18.98■□□□□ 0.63
DDX39A-208ENST00000588692 NBPF26B4DH59 902 aa18.97■□□□□ 0.63
DDX39A-208ENST00000588692 PIP4K2AP48426 406 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-208ENST00000588692 NBPF10Q6P3W6 841 aaKnown RBP18.97■□□□□ 0.63
DDX39A-208ENST00000588692 CLEC4GQ6UXB4 293 aa18.97■□□□□ 0.63
DDX39A-208ENST00000588692 BICDL1Q6ZP65 573 aa18.97■□□□□ 0.63
DDX39A-208ENST00000588692 NBPF15Q8N660 670 aa18.97■□□□□ 0.63
DDX39A-208ENST00000588692 ADAMTS8Q9UP79 889 aa18.97■□□□□ 0.63
DDX39A-208ENST00000588692 ZNF652Q9Y2D9 606 aa18.97■□□□□ 0.63
DDX39A-208ENST00000588692 ADCY9O60503 1353 aa18.97■□□□□ 0.63
DDX39A-208ENST00000588692 DALRD3Q5D0E6 543 aaKnown RBP18.97■□□□□ 0.63
DDX39A-208ENST00000588692 TSPYL4Q9UJ04 414 aa18.97■□□□□ 0.63
DDX39A-208ENST00000588692 CHRNA5P30532 468 aa18.96■□□□□ 0.63
DDX39A-208ENST00000588692 ANKRD31Q8N7Z5 1873 aa18.96■□□□□ 0.63
DDX39A-208ENST00000588692 SETDB2Q96T68 719 aa18.96■□□□□ 0.63
DDX39A-208ENST00000588692 ZNF316A6NFI3 1004 aaPredicted RBP18.95■□□□□ 0.62
DDX39A-208ENST00000588692 RRP7AQ9Y3A4 280 aaKnown RBP18.95■□□□□ 0.62
DDX39A-208ENST00000588692 ATP10DQ9P241 1426 aa18.94■□□□□ 0.62
DDX39A-208ENST00000588692 ERBB4Q15303 1308 aa18.94■□□□□ 0.62
DDX39A-208ENST00000588692 PDZRN3Q9UPQ7 1066 aa18.94■□□□□ 0.62
DDX39A-208ENST00000588692 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
DDX39A-208ENST00000588692 PRR5LQ6MZQ0 368 aa18.93■□□□□ 0.62
DDX39A-208ENST00000588692 CNBD1Q8NA66 436 aa18.92■□□□□ 0.62
DDX39A-208ENST00000588692 BRIP1Q9BX63 1249 aa18.92■□□□□ 0.62
DDX39A-208ENST00000588692 TRIM35Q9UPQ4 493 aa18.92■□□□□ 0.62
DDX39A-208ENST00000588692 H0YIN7 160 aa18.91■□□□□ 0.62
DDX39A-208ENST00000588692 PDE6BP35913 854 aa18.91■□□□□ 0.62
DDX39A-208ENST00000588692 ARHGAP27Q6ZUM4 889 aa18.91■□□□□ 0.62
DDX39A-208ENST00000588692 COL11A2P13942 1736 aaPredicted RBP18.91■□□□□ 0.62
DDX39A-208ENST00000588692 NPHP1O15259 732 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms