RNA–Protein interactions for RNA: ENST00000588580.6

SUGP1-208, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 2

Gene SUGP1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-208ENST00000588580 SSFA2P28290 1259 aa20.78■□□□□ 0.92
SUGP1-208ENST00000588580 NEUROD2Q15784 382 aa20.78■□□□□ 0.92
SUGP1-208ENST00000588580 SLC52A2Q9HAB3 445 aa20.78■□□□□ 0.92
SUGP1-208ENST00000588580 WDR90Q96KV7 1748 aa20.78■□□□□ 0.92
SUGP1-208ENST00000588580 LMOD3Q0VAK6 560 aa20.77■□□□□ 0.92
SUGP1-208ENST00000588580 CCDC27Q2M243 656 aa20.77■□□□□ 0.92
SUGP1-208ENST00000588580 LINC00116Q8NCU8 138 aa20.77■□□□□ 0.92
SUGP1-208ENST00000588580 PIGBQ92521 554 aa20.77■□□□□ 0.92
SUGP1-208ENST00000588580 THUMPD2Q9BTF0 503 aaKnown RBP20.77■□□□□ 0.92
SUGP1-208ENST00000588580 TGFB2P61812 414 aa20.76■□□□□ 0.91
SUGP1-208ENST00000588580 RTF1Q92541 710 aaKnown RBP20.76■□□□□ 0.91
SUGP1-208ENST00000588580 PXDNLA1KZ92 1463 aa20.75■□□□□ 0.91
SUGP1-208ENST00000588580 MMP10P09238 476 aa20.75■□□□□ 0.91
SUGP1-208ENST00000588580 KCPQ6ZWJ8 1503 aa20.74■□□□□ 0.91
SUGP1-208ENST00000588580 ZNF831Q5JPB2 1677 aa20.74■□□□□ 0.91
SUGP1-208ENST00000588580 CABP4P57796 275 aa20.74■□□□□ 0.91
SUGP1-208ENST00000588580 FSTL1Q12841 308 aa20.74■□□□□ 0.91
SUGP1-208ENST00000588580 C16orf71Q8IYS4 520 aaPredicted RBP20.74■□□□□ 0.91
SUGP1-208ENST00000588580 NFATC2IPQ8NCF5 419 aa20.74■□□□□ 0.91
SUGP1-208ENST00000588580 TMOD3Q9NYL9 352 aa20.74■□□□□ 0.91
SUGP1-208ENST00000588580 ZNF521Q96K83 1311 aa20.74■□□□□ 0.91
SUGP1-208ENST00000588580 LOC102724428A0A0B4J2F2 783 aa20.73■□□□□ 0.91
SUGP1-208ENST00000588580 SIK1P57059 783 aa20.73■□□□□ 0.91
SUGP1-208ENST00000588580 TEFQ10587 303 aa20.72■□□□□ 0.91
SUGP1-208ENST00000588580 C9orf131Q5VYM1 1079 aa20.72■□□□□ 0.91
SUGP1-208ENST00000588580 WWC1Q8IX03 1113 aa20.72■□□□□ 0.91
SUGP1-208ENST00000588580 NGEFQ8N5V2 710 aa20.72■□□□□ 0.91
SUGP1-208ENST00000588580 N4BP2Q86UW6 1770 aaPredicted RBP20.72■□□□□ 0.91
SUGP1-208ENST00000588580 PCNTO95613 3336 aa20.71■□□□□ 0.91
SUGP1-208ENST00000588580 TJP1Q07157 1748 aa20.71■□□□□ 0.91
SUGP1-208ENST00000588580 GNPATO15228 680 aa20.71■□□□□ 0.91
SUGP1-208ENST00000588580 DPEP1P16444 411 aa20.71■□□□□ 0.91
SUGP1-208ENST00000588580 ITPK1Q13572 414 aa20.71■□□□□ 0.91
SUGP1-208ENST00000588580 KIAA1551Q9HCM1 1747 aa20.7■□□□□ 0.9
SUGP1-208ENST00000588580 RRAGCQ9HB90 399 aa20.69■□□□□ 0.9
SUGP1-208ENST00000588580 ATG3Q9NT62 314 aa20.69■□□□□ 0.9
SUGP1-208ENST00000588580 ASAP1Q9ULH1 1129 aa20.69■□□□□ 0.9
SUGP1-208ENST00000588580 COL5A3P25940 1745 aaPredicted RBP20.69■□□□□ 0.9
SUGP1-208ENST00000588580 KIF13BQ9NQT8 1826 aa20.69■□□□□ 0.9
SUGP1-208ENST00000588580 SALL2Q9Y467 1007 aaPredicted RBP20.68■□□□□ 0.9
SUGP1-208ENST00000588580 ZNF853P0CG23 659 aa20.67■□□□□ 0.9
SUGP1-208ENST00000588580 KCNA3P22001 575 aa20.67■□□□□ 0.9
SUGP1-208ENST00000588580 ATP6V1AP38606 617 aa20.67■□□□□ 0.9
SUGP1-208ENST00000588580 TAF7Q15545 349 aaPredicted RBP20.67■□□□□ 0.9
SUGP1-208ENST00000588580 LAMB4A4D0S4 1761 aa20.67■□□□□ 0.9
SUGP1-208ENST00000588580 NLGN1Q8N2Q7 840 aa20.66■□□□□ 0.9
SUGP1-208ENST00000588580 IL16Q14005 1332 aa20.66■□□□□ 0.9
SUGP1-208ENST00000588580 SLC39A6Q13433 755 aa20.65■□□□□ 0.9
SUGP1-208ENST00000588580 C10orf71Q711Q0 1435 aa20.64■□□□□ 0.89
SUGP1-208ENST00000588580 KDM2BQ8NHM5 1336 aa20.64■□□□□ 0.89
SUGP1-208ENST00000588580 BTBD11A6QL63 1104 aa20.64■□□□□ 0.89
SUGP1-208ENST00000588580 CHL1O00533 1208 aa20.64■□□□□ 0.89
SUGP1-208ENST00000588580 KCNQ3O43525 872 aa20.64■□□□□ 0.89
SUGP1-208ENST00000588580 HNRNPUQ00839 825 aaKnown RBP eCLIP20.64■□□□□ 0.89
SUGP1-208ENST00000588580 TRAPPC3LQ5T215 181 aa20.64■□□□□ 0.89
SUGP1-208ENST00000588580 ZNF790Q6PG37 636 aa20.64■□□□□ 0.89
SUGP1-208ENST00000588580 WDR63Q8IWG1 891 aa20.64■□□□□ 0.89
SUGP1-208ENST00000588580 CCDC87Q9NVE4 849 aa20.64■□□□□ 0.89
SUGP1-208ENST00000588580 IFT57Q9NWB7 429 aa20.64■□□□□ 0.89
SUGP1-208ENST00000588580 BABAM1Q9NWV8 329 aa20.64■□□□□ 0.89
SUGP1-208ENST00000588580 HSPA1AP0DMV8 641 aaKnown RBP20.63■□□□□ 0.89
SUGP1-208ENST00000588580 HSPA1BP0DMV9 641 aaKnown RBP20.63■□□□□ 0.89
SUGP1-208ENST00000588580 CALD1Q05682 793 aaKnown RBP20.63■□□□□ 0.89
SUGP1-208ENST00000588580 CFAP44Q96MT7 982 aa20.63■□□□□ 0.89
SUGP1-208ENST00000588580 SLC4A9Q96Q91 983 aa20.63■□□□□ 0.89
SUGP1-208ENST00000588580 MIS18AQ9NYP9 233 aa20.63■□□□□ 0.89
SUGP1-208ENST00000588580 HEG1Q9ULI3 1381 aa20.62■□□□□ 0.89
SUGP1-208ENST00000588580 ARHGEF1Q92888 912 aaKnown RBP20.62■□□□□ 0.89
SUGP1-208ENST00000588580 SPINK5Q9NQ38 1064 aaPredicted RBP20.62■□□□□ 0.89
SUGP1-208ENST00000588580 RNF181Q9P0P0 153 aa20.62■□□□□ 0.89
SUGP1-208ENST00000588580 RTCBQ9Y3I0 505 aaKnown RBP20.62■□□□□ 0.89
SUGP1-208ENST00000588580 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
SUGP1-208ENST00000588580 ZBED9Q6R2W3 1325 aa20.6■□□□□ 0.89
SUGP1-208ENST00000588580 GYS1P13807 737 aa20.6■□□□□ 0.89
SUGP1-208ENST00000588580 GNAI1P63096 354 aa20.6■□□□□ 0.89
SUGP1-208ENST00000588580 SMC1BQ8NDV3 1235 aa20.6■□□□□ 0.89
SUGP1-208ENST00000588580 ZNF496Q96IT1 587 aaPredicted RBP20.6■□□□□ 0.89
SUGP1-208ENST00000588580 MBIPQ9NS73 344 aa20.6■□□□□ 0.89
SUGP1-208ENST00000588580 PIM2Q9P1W9 311 aa20.6■□□□□ 0.89
SUGP1-208ENST00000588580 TSPYL4Q9UJ04 414 aa20.6■□□□□ 0.89
SUGP1-208ENST00000588580 PARP3Q9Y6F1 533 aa20.6■□□□□ 0.89
SUGP1-208ENST00000588580 BRCA1P38398 1863 aaKnown RBP20.58■□□□□ 0.89
SUGP1-208ENST00000588580 PTCD1O75127 700 aaKnown RBP20.58■□□□□ 0.89
SUGP1-208ENST00000588580 EIF4A1P60842 406 aaKnown RBP20.58■□□□□ 0.89
SUGP1-208ENST00000588580 TTC5Q8N0Z6 440 aa20.58■□□□□ 0.89
SUGP1-208ENST00000588580 FANCIQ9NVI1 1328 aa20.56■□□□□ 0.88
SUGP1-208ENST00000588580 DALRD3Q5D0E6 543 aaKnown RBP20.56■□□□□ 0.88
SUGP1-208ENST00000588580 TSR2Q969E8 191 aaKnown RBP20.56■□□□□ 0.88
SUGP1-208ENST00000588580 FMNL2Q96PY5 1086 aa20.56■□□□□ 0.88
SUGP1-208ENST00000588580 LAS1LQ9Y4W2 734 aaKnown RBP20.56■□□□□ 0.88
SUGP1-208ENST00000588580 ARFGEF1Q9Y6D6 1849 aa20.55■□□□□ 0.88
SUGP1-208ENST00000588580 RFC4P35249 363 aa20.55■□□□□ 0.88
SUGP1-208ENST00000588580 GOLGA2Q08379 1002 aa20.55■□□□□ 0.88
SUGP1-208ENST00000588580 RC3H1Q5TC82 1133 aaKnown RBP20.55■□□□□ 0.88
SUGP1-208ENST00000588580 VSIG10Q8N0Z9 540 aa20.55■□□□□ 0.88
SUGP1-208ENST00000588580 C4AP0C0L4 1744 aa20.54■□□□□ 0.88
SUGP1-208ENST00000588580 RPS6KA4O75676 772 aa20.54■□□□□ 0.88
SUGP1-208ENST00000588580 ADRA2BP18089 450 aa20.54■□□□□ 0.88
SUGP1-208ENST00000588580 CDCA7LQ96GN5 454 aa20.54■□□□□ 0.88
SUGP1-208ENST00000588580 RBM42Q9BTD8 480 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms