RNA–Protein interactions for RNA: ENST00000588554.1

GPATCH8-206, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-206ENST00000588554 CYP27B1O15528 508 aa10.47□□□□□ -0.73
GPATCH8-206ENST00000588554 CDCA8Q53HL2 280 aa10.47□□□□□ -0.73
GPATCH8-206ENST00000588554 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
GPATCH8-206ENST00000588554 MPRIPQ6WCQ1 1025 aa10.47□□□□□ -0.73
GPATCH8-206ENST00000588554 CCNL1Q9UK58 526 aaPredicted RBP10.47□□□□□ -0.73
GPATCH8-206ENST00000588554 RTL1A6NKG5 1358 aa10.47□□□□□ -0.73
GPATCH8-206ENST00000588554 POTEB3A0JP26 581 aa10.46□□□□□ -0.73
GPATCH8-206ENST00000588554 POTEBQ6S5H4 581 aa10.46□□□□□ -0.73
GPATCH8-206ENST00000588554 COL23A1Q86Y22 540 aaPredicted RBP10.46□□□□□ -0.73
GPATCH8-206ENST00000588554 PLPP6Q8IY26 295 aa10.46□□□□□ -0.73
GPATCH8-206ENST00000588554 KIF20BQ96Q89 1820 aa10.45□□□□□ -0.74
GPATCH8-206ENST00000588554 FLT4P35916 1363 aa10.45□□□□□ -0.74
GPATCH8-206ENST00000588554 POLKQ9UBT6 870 aa10.45□□□□□ -0.74
GPATCH8-206ENST00000588554 SMG6Q86US8 1419 aaKnown RBP10.44□□□□□ -0.74
GPATCH8-206ENST00000588554 HSPA5P11021 654 aaKnown RBP10.44□□□□□ -0.74
GPATCH8-206ENST00000588554 PDE4AP27815 886 aa10.44□□□□□ -0.74
GPATCH8-206ENST00000588554 DSG2Q14126 1118 aa10.44□□□□□ -0.74
GPATCH8-206ENST00000588554 MSL1Q68DK7 614 aa10.44□□□□□ -0.74
GPATCH8-206ENST00000588554 NLGN2Q8NFZ4 835 aa10.44□□□□□ -0.74
GPATCH8-206ENST00000588554 EYA1Q99502 592 aa10.44□□□□□ -0.74
GPATCH8-206ENST00000588554 TIMELESSQ9UNS1 1208 aa10.44□□□□□ -0.74
GPATCH8-206ENST00000588554 CGNL1Q0VF96 1302 aa10.43□□□□□ -0.74
GPATCH8-206ENST00000588554 VARS2Q5ST30 1063 aaKnown RBP10.43□□□□□ -0.74
GPATCH8-206ENST00000588554 AMIGO3Q86WK7 504 aa10.43□□□□□ -0.74
GPATCH8-206ENST00000588554 PIGBQ92521 554 aa10.43□□□□□ -0.74
GPATCH8-206ENST00000588554 KHSRPQ92945 711 aaKnown RBP eCLIP10.43□□□□□ -0.741e-6■□□□□ 8.7
GPATCH8-206ENST00000588554 CRISPLD2Q9H0B8 497 aa10.43□□□□□ -0.74
GPATCH8-206ENST00000588554 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.43□□□□□ -0.74
GPATCH8-206ENST00000588554 PCDHGA4Q9Y5G9 962 aa10.43□□□□□ -0.74
GPATCH8-206ENST00000588554 LY75O60449 1722 aa10.43□□□□□ -0.74
GPATCH8-206ENST00000588554 TUBGCP6Q96RT7 1819 aa10.42□□□□□ -0.74
GPATCH8-206ENST00000588554 WASHC2AQ641Q2 1341 aa10.42□□□□□ -0.74
GPATCH8-206ENST00000588554 PCDH11XQ9BZA7 1347 aa10.42□□□□□ -0.74
GPATCH8-206ENST00000588554 PCDH11YQ9BZA8 1340 aa10.42□□□□□ -0.74
GPATCH8-206ENST00000588554 GPR162Q16538 588 aa10.42□□□□□ -0.74
GPATCH8-206ENST00000588554 SLC16A10Q8TF71 515 aa10.42□□□□□ -0.74
GPATCH8-206ENST00000588554 PANK3Q9H999 370 aa10.42□□□□□ -0.74
GPATCH8-206ENST00000588554 PALLDQ8WX93 1383 aa10.41□□□□□ -0.74
GPATCH8-206ENST00000588554 POLD1P28340 1107 aa10.41□□□□□ -0.74
GPATCH8-206ENST00000588554 EIF4A2Q14240 407 aaKnown RBP10.41□□□□□ -0.74
GPATCH8-206ENST00000588554 ZNF784Q8NCA9 323 aaPredicted RBP10.41□□□□□ -0.74
GPATCH8-206ENST00000588554 KIF24Q5T7B8 1368 aa10.4□□□□□ -0.74
GPATCH8-206ENST00000588554 NUDT7P0C024 238 aa10.4□□□□□ -0.74
GPATCH8-206ENST00000588554 EIF4G2P78344 907 aaKnown RBP eCLIP10.4□□□□□ -0.74
GPATCH8-206ENST00000588554 CCER1Q8TC90 406 aaPredicted RBP10.4□□□□□ -0.74
GPATCH8-206ENST00000588554 ASAP1Q9ULH1 1129 aa10.4□□□□□ -0.74
GPATCH8-206ENST00000588554 TOGARAM1Q9Y4F4 1720 aa10.4□□□□□ -0.74
GPATCH8-206ENST00000588554 ZNF316A6NFI3 1004 aaPredicted RBP10.39□□□□□ -0.75
GPATCH8-206ENST00000588554 TBC1D12O60347 775 aa10.39□□□□□ -0.75
GPATCH8-206ENST00000588554 PHF14O94880 888 aa10.39□□□□□ -0.75
GPATCH8-206ENST00000588554 PTCD2Q8WV60 388 aaKnown RBP10.39□□□□□ -0.75
GPATCH8-206ENST00000588554 SPG7Q9UQ90 795 aa10.39□□□□□ -0.75
GPATCH8-206ENST00000588554 MAP2P11137 1827 aaKnown RBP10.39□□□□□ -0.75
GPATCH8-206ENST00000588554 MAP3K5Q99683 1374 aa10.39□□□□□ -0.75
GPATCH8-206ENST00000588554 PHKG2P15735 406 aa10.38□□□□□ -0.75
GPATCH8-206ENST00000588554 YBX3P16989 372 aaKnown RBP eCLIP10.38□□□□□ -0.75
GPATCH8-206ENST00000588554 ITPK1Q13572 414 aa10.38□□□□□ -0.75
GPATCH8-206ENST00000588554 PPP1R15BQ5SWA1 713 aa10.38□□□□□ -0.75
GPATCH8-206ENST00000588554 LINC00116Q8NCU8 138 aa10.38□□□□□ -0.75
GPATCH8-206ENST00000588554 WWC3Q9ULE0 1092 aa10.38□□□□□ -0.75
GPATCH8-206ENST00000588554 NCAPD2Q15021 1401 aa10.38□□□□□ -0.75
GPATCH8-206ENST00000588554 QSER1Q2KHR3 1735 aa10.38□□□□□ -0.75
GPATCH8-206ENST00000588554 C5P01031 1676 aa10.38□□□□□ -0.75
GPATCH8-206ENST00000588554 ITGB4P16144 1822 aa10.37□□□□□ -0.75
GPATCH8-206ENST00000588554 CLSPNQ9HAW4 1339 aa10.37□□□□□ -0.75
GPATCH8-206ENST00000588554 COL24A1Q17RW2 1714 aa10.37□□□□□ -0.75
GPATCH8-206ENST00000588554 ZNF687Q8N1G0 1237 aa10.37□□□□□ -0.75
GPATCH8-206ENST00000588554 SPRYD3Q8NCJ5 442 aa10.37□□□□□ -0.75
GPATCH8-206ENST00000588554 LARP6Q9BRS8 491 aaKnown RBP10.37□□□□□ -0.75
GPATCH8-206ENST00000588554 UTRNP46939 3433 aa10.36□□□□□ -0.75
GPATCH8-206ENST00000588554 PKD1L3Q7Z443 1732 aa10.36□□□□□ -0.75
GPATCH8-206ENST00000588554 ANKRD26Q9UPS8 1709 aa10.36□□□□□ -0.75
GPATCH8-206ENST00000588554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.36□□□□□ -0.75
GPATCH8-206ENST00000588554 LOC102724428A0A0B4J2F2 783 aa10.36□□□□□ -0.75
GPATCH8-206ENST00000588554 SIK1P57059 783 aa10.36□□□□□ -0.75
GPATCH8-206ENST00000588554 AEBP1Q8IUX7 1158 aa10.36□□□□□ -0.75
GPATCH8-206ENST00000588554 IFNL2Q8IZJ0 200 aa10.36□□□□□ -0.75
GPATCH8-206ENST00000588554 SMARCC1Q92922 1105 aaPredicted RBP10.36□□□□□ -0.75
GPATCH8-206ENST00000588554 AK7Q96M32 723 aa10.36□□□□□ -0.75
GPATCH8-206ENST00000588554 ATG3Q9NT62 314 aa10.36□□□□□ -0.75
GPATCH8-206ENST00000588554 TMOD3Q9NYL9 352 aa10.36□□□□□ -0.75
GPATCH8-206ENST00000588554 ATP6V1AP38606 617 aa10.35□□□□□ -0.75
GPATCH8-206ENST00000588554 MORC1Q86VD1 984 aa10.35□□□□□ -0.75
GPATCH8-206ENST00000588554 DDX27Q96GQ7 796 aaKnown RBP10.35□□□□□ -0.75
GPATCH8-206ENST00000588554 SLC4A9Q96Q91 983 aa10.35□□□□□ -0.75
GPATCH8-206ENST00000588554 KRTAP3-3Q9BYR6 98 aa10.35□□□□□ -0.75
GPATCH8-206ENST00000588554 KRTAP3-2Q9BYR7 98 aa10.35□□□□□ -0.75
GPATCH8-206ENST00000588554 C4BP0C0L5 1744 aa10.35□□□□□ -0.75
GPATCH8-206ENST00000588554 TAF1LQ8IZX4 1826 aa10.35□□□□□ -0.75
GPATCH8-206ENST00000588554 LHX6Q9UPM6 363 aa10.34□□□□□ -0.75
GPATCH8-206ENST00000588554 IGSF1Q8N6C5 1336 aa10.33□□□□□ -0.76
GPATCH8-206ENST00000588554 GNPATO15228 680 aa10.33□□□□□ -0.76
GPATCH8-206ENST00000588554 CNGB1Q14028 1251 aaPredicted RBP10.33□□□□□ -0.76
GPATCH8-206ENST00000588554 FLAD1Q8NFF5 587 aa10.33□□□□□ -0.76
GPATCH8-206ENST00000588554 SULT6B1Q6IMI4 303 aa10.32□□□□□ -0.76
GPATCH8-206ENST00000588554 ZNF530Q6P9A1 599 aaPredicted RBP10.32□□□□□ -0.76
GPATCH8-206ENST00000588554 PLEKHO1Q53GL0 409 aaPredicted RBP10.31□□□□□ -0.76
GPATCH8-206ENST00000588554 DCAF5Q96JK2 942 aa10.31□□□□□ -0.76
GPATCH8-206ENST00000588554 KNSTRNQ9Y448 316 aa10.31□□□□□ -0.76
GPATCH8-206ENST00000588554 CD2APQ9Y5K6 639 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 411 ms