RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 TM4SF1P30408 202 aa21.43■■□□□ 1.02
ERCC1-206ENST00000588300 TTC5Q8N0Z6 440 aa21.43■■□□□ 1.02
ERCC1-206ENST00000588300 GAS2L2Q8NHY3 880 aa21.43■■□□□ 1.02
ERCC1-206ENST00000588300 SIPA1L3O60292 1781 aaPredicted RBP21.42■■□□□ 1.02
ERCC1-206ENST00000588300 NARFQ9UHQ1 456 aa21.42■■□□□ 1.02
ERCC1-206ENST00000588300 AFDNP55196 1824 aaKnown RBP21.41■■□□□ 1.02
ERCC1-206ENST00000588300 GNAT3A8MTJ3 354 aa21.41■■□□□ 1.02
ERCC1-206ENST00000588300 TEFQ10587 303 aa21.41■■□□□ 1.02
ERCC1-206ENST00000588300 DALRD3Q5D0E6 543 aaKnown RBP21.4■■□□□ 1.02
ERCC1-206ENST00000588300 CFAP53Q96M91 514 aa21.4■■□□□ 1.02
ERCC1-206ENST00000588300 NRXN2Q9P2S2 1712 aa21.4■■□□□ 1.02
ERCC1-206ENST00000588300 KIF3CO14782 793 aa21.39■■□□□ 1.01
ERCC1-206ENST00000588300 STARD3NLO95772 234 aa21.39■■□□□ 1.01
ERCC1-206ENST00000588300 IL17REQ8NFR9 667 aa21.39■■□□□ 1.01
ERCC1-206ENST00000588300 CANXP27824 592 aaKnown RBP21.38■■□□□ 1.01
ERCC1-206ENST00000588300 CHRNA5P30532 468 aa21.38■■□□□ 1.01
ERCC1-206ENST00000588300 NFIXQ14938 502 aa21.38■■□□□ 1.01
ERCC1-206ENST00000588300 HSPA6P17066 643 aa21.37■■□□□ 1.01
ERCC1-206ENST00000588300 ZNF790Q6PG37 636 aa21.37■■□□□ 1.01
ERCC1-206ENST00000588300 HEG1Q9ULI3 1381 aa21.36■■□□□ 1.01
ERCC1-206ENST00000588300 ZNF496Q96IT1 587 aaPredicted RBP21.36■■□□□ 1.01
ERCC1-206ENST00000588300 TEX13AQ9BXU3 409 aaPredicted RBP21.36■■□□□ 1.01
ERCC1-206ENST00000588300 BCL2L12Q9HB09 334 aa21.36■■□□□ 1.01
ERCC1-206ENST00000588300 DLEC1Q9Y238 1755 aa21.36■■□□□ 1.01
ERCC1-206ENST00000588300 A0A087WZG4 1122 aa21.35■■□□□ 1.01
ERCC1-206ENST00000588300 PRKAR2BP31323 418 aa21.35■■□□□ 1.01
ERCC1-206ENST00000588300 C9orf131Q5VYM1 1079 aa21.35■■□□□ 1.01
ERCC1-206ENST00000588300 NUDCQ9Y266 331 aa21.35■■□□□ 1.01
ERCC1-206ENST00000588300 CEMIPQ8WUJ3 1361 aa21.35■■□□□ 1.01
ERCC1-206ENST00000588300 SCN7AQ01118 1682 aa21.34■■□□□ 1.01
ERCC1-206ENST00000588300 SERPINB2P05120 415 aa21.34■■□□□ 1.01
ERCC1-206ENST00000588300 EIF5P55010 431 aaKnown RBP21.34■■□□□ 1.01
ERCC1-206ENST00000588300 RSPH6AQ9H0K4 717 aa21.34■■□□□ 1.01
ERCC1-206ENST00000588300 CEP350Q5VT06 3117 aa21.33■■□□□ 1.01
ERCC1-206ENST00000588300 PHACTR3Q96KR7 559 aa21.33■■□□□ 1.01
ERCC1-206ENST00000588300 FMNL2Q96PY5 1086 aa21.33■■□□□ 1.01
ERCC1-206ENST00000588300 SBF1O95248 1867 aa21.32■■□□□ 1
ERCC1-206ENST00000588300 TOMM70O94826 608 aa21.31■■□□□ 1
ERCC1-206ENST00000588300 RNF181Q9P0P0 153 aa21.31■■□□□ 1
ERCC1-206ENST00000588300 BTBD11A6QL63 1104 aa21.3■■□□□ 1
ERCC1-206ENST00000588300 PPP2R1AP30153 589 aa21.3■■□□□ 1
ERCC1-206ENST00000588300 IL6STP40189 918 aaPredicted RBP21.3■■□□□ 1
ERCC1-206ENST00000588300 BICDL1Q6ZP65 573 aa21.3■■□□□ 1
ERCC1-206ENST00000588300 NMRK2Q9NPI5 230 aa21.3■■□□□ 1
ERCC1-206ENST00000588300 ZNF330Q9Y3S2 320 aaPredicted RBP21.3■■□□□ 1
ERCC1-206ENST00000588300 U2AF1L5P0DN76 240 aaPredicted RBP21.29■■□□□ 1
ERCC1-206ENST00000588300 U2AF1Q01081 240 aaKnown RBP eCLIP21.29■■□□□ 1
ERCC1-206ENST00000588300 NPM2Q86SE8 214 aaKnown RBP21.29■■□□□ 1
ERCC1-206ENST00000588300 CARMIL3Q8ND23 1372 aa21.28■■□□□ 1
ERCC1-206ENST00000588300 TBC1D9BQ66K14 1250 aa21.27■■□□□ 1
ERCC1-206ENST00000588300 C2CD5Q86YS7 1000 aa21.27■■□□□ 1
ERCC1-206ENST00000588300 TTLL6Q8N841 843 aa21.27■■□□□ 1
ERCC1-206ENST00000588300 RTF1Q92541 710 aaKnown RBP21.27■■□□□ 1
ERCC1-206ENST00000588300 TBC1D2BQ9UPU7 963 aa21.27■■□□□ 1
ERCC1-206ENST00000588300 TNRC6CQ9HCJ0 1690 aaKnown RBP21.27■■□□□ 1
ERCC1-206ENST00000588300 KDM2BQ8NHM5 1336 aa21.27■□□□□ 0.99
ERCC1-206ENST00000588300 ANKRD31Q8N7Z5 1873 aa21.26■□□□□ 0.99
ERCC1-206ENST00000588300 BCORQ6W2J9 1755 aa21.26■□□□□ 0.99
ERCC1-206ENST00000588300 H0YIN7 160 aa21.26■□□□□ 0.99
ERCC1-206ENST00000588300 KCNQ3O43525 872 aa21.26■□□□□ 0.99
ERCC1-206ENST00000588300 A1BGP04217 495 aa21.26■□□□□ 0.99
ERCC1-206ENST00000588300 APLP1P51693 650 aa21.24■□□□□ 0.99
ERCC1-206ENST00000588300 RASSF7Q02833 373 aa21.24■□□□□ 0.99
ERCC1-206ENST00000588300 C16orf71Q8IYS4 520 aaPredicted RBP21.24■□□□□ 0.99
ERCC1-206ENST00000588300 PDZRN3Q9UPQ7 1066 aa21.24■□□□□ 0.99
ERCC1-206ENST00000588300 ZC3H4Q9UPT8 1303 aaKnown RBP21.24■□□□□ 0.99
ERCC1-206ENST00000588300 MCM10Q7L590 875 aa21.23■□□□□ 0.99
ERCC1-206ENST00000588300 RBM46Q8TBY0 533 aaKnown RBP21.23■□□□□ 0.99
ERCC1-206ENST00000588300 COL11A2P13942 1736 aaPredicted RBP21.22■□□□□ 0.99
ERCC1-206ENST00000588300 CAMTA2O94983 1202 aa21.22■□□□□ 0.99
ERCC1-206ENST00000588300 LMNB1P20700 586 aa21.22■□□□□ 0.99
ERCC1-206ENST00000588300 PDE6BP35913 854 aa21.22■□□□□ 0.99
ERCC1-206ENST00000588300 PRR5LQ6MZQ0 368 aa21.22■□□□□ 0.99
ERCC1-206ENST00000588300 BRIP1Q9BX63 1249 aa21.22■□□□□ 0.99
ERCC1-206ENST00000588300 CCDC88AQ3V6T2 1871 aa21.22■□□□□ 0.99
ERCC1-206ENST00000588300 TIAM2Q8IVF5 1701 aa21.21■□□□□ 0.99
ERCC1-206ENST00000588300 HTATSF1O43719 755 aaKnown RBP21.21■□□□□ 0.99
ERCC1-206ENST00000588300 DZIP3Q86Y13 1208 aaKnown RBP21.21■□□□□ 0.99
ERCC1-206ENST00000588300 SETDB2Q96T68 719 aa21.21■□□□□ 0.99
ERCC1-206ENST00000588300 USP16Q9Y5T5 823 aa21.21■□□□□ 0.99
ERCC1-206ENST00000588300 SNRPA1P09661 255 aaKnown RBP21.2■□□□□ 0.98
ERCC1-206ENST00000588300 NPHP1O15259 732 aa21.19■□□□□ 0.98
ERCC1-206ENST00000588300 DCTN1Q14203 1278 aa21.19■□□□□ 0.98
ERCC1-206ENST00000588300 CNBD1Q8NA66 436 aa21.19■□□□□ 0.98
ERCC1-206ENST00000588300 ZNF622Q969S3 477 aaKnown RBP eCLIP21.19■□□□□ 0.98
ERCC1-206ENST00000588300 RRAGCQ9HB90 399 aa21.19■□□□□ 0.98
ERCC1-206ENST00000588300 WDR90Q96KV7 1748 aa21.18■□□□□ 0.98
ERCC1-206ENST00000588300 PRAMEF22A3QJZ6 481 aa21.18■□□□□ 0.98
ERCC1-206ENST00000588300 NEFMP07197 916 aa21.18■□□□□ 0.98
ERCC1-206ENST00000588300 PIP4K2AP48426 406 aaPredicted RBP21.18■□□□□ 0.98
ERCC1-206ENST00000588300 ST5P78524 1137 aa21.18■□□□□ 0.98
ERCC1-206ENST00000588300 CCDC24Q8N4L8 307 aa21.18■□□□□ 0.98
ERCC1-206ENST00000588300 DLG5Q8TDM6 1919 aa21.17■□□□□ 0.98
ERCC1-206ENST00000588300 NFKBIEO00221 500 aa21.17■□□□□ 0.98
ERCC1-206ENST00000588300 FSTL1Q12841 308 aa21.17■□□□□ 0.98
ERCC1-206ENST00000588300 LAMB4A4D0S4 1761 aa21.17■□□□□ 0.98
ERCC1-206ENST00000588300 CACNA1SQ13698 1873 aa21.17■□□□□ 0.98
ERCC1-206ENST00000588300 FER1L6Q2WGJ9 1857 aa21.16■□□□□ 0.98
ERCC1-206ENST00000588300 PRELPP51888 382 aa21.16■□□□□ 0.98
ERCC1-206ENST00000588300 CLEC4GQ6UXB4 293 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms