RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SLC4A2P04920 1241 aa14.47□□□□□ -0.09
VMP1-207ENST00000588131 SNRPA1P09661 255 aaKnown RBP14.47□□□□□ -0.09
VMP1-207ENST00000588131 RXRBP28702 533 aa14.47□□□□□ -0.09
VMP1-207ENST00000588131 G2E3Q7L622 706 aa14.47□□□□□ -0.09
VMP1-207ENST00000588131 PTF1AQ7RTS3 328 aa14.47□□□□□ -0.09
VMP1-207ENST00000588131 KRT27Q7Z3Y8 459 aa14.47□□□□□ -0.09
VMP1-207ENST00000588131 TJP1Q07157 1748 aa14.46□□□□□ -0.09
VMP1-207ENST00000588131 KAT6BQ8WYB5 2073 aa14.46□□□□□ -0.09
VMP1-207ENST00000588131 BTAF1O14981 1849 aa14.46□□□□□ -0.09
VMP1-207ENST00000588131 TRIM27P14373 513 aa14.46□□□□□ -0.09
VMP1-207ENST00000588131 PANK1Q8TE04 598 aa14.46□□□□□ -0.09
VMP1-207ENST00000588131 CRBNQ96SW2 442 aa14.46□□□□□ -0.09
VMP1-207ENST00000588131 STK31Q9BXU1 1019 aa14.46□□□□□ -0.09
VMP1-207ENST00000588131 CHPF2Q9P2E5 772 aa14.46□□□□□ -0.09
VMP1-207ENST00000588131 USP16Q9Y5T5 823 aa14.46□□□□□ -0.09
VMP1-207ENST00000588131 ANXA1P04083 346 aa14.45□□□□□ -0.1
VMP1-207ENST00000588131 RLBP1P12271 317 aa14.45□□□□□ -0.1
VMP1-207ENST00000588131 ATF7IPQ6VMQ6 1270 aa14.45□□□□□ -0.1
VMP1-207ENST00000588131 EXOC6Q8TAG9 804 aa14.45□□□□□ -0.1
VMP1-207ENST00000588131 CLUAP1Q96AJ1 413 aa14.45□□□□□ -0.1
VMP1-207ENST00000588131 SLC4A9Q96Q91 983 aa14.45□□□□□ -0.1
VMP1-207ENST00000588131 CACNA1FO60840 1977 aa14.44□□□□□ -0.1
VMP1-207ENST00000588131 IPO8O15397 1037 aaKnown RBP14.44□□□□□ -0.1
VMP1-207ENST00000588131 PDE3AQ14432 1141 aa14.44□□□□□ -0.1
VMP1-207ENST00000588131 PROSER3Q2NL68 480 aa14.44□□□□□ -0.1
VMP1-207ENST00000588131 RBM42Q9BTD8 480 aaKnown RBP14.44□□□□□ -0.1
VMP1-207ENST00000588131 PALLDQ8WX93 1383 aa14.44□□□□□ -0.1
VMP1-207ENST00000588131 PDIA6Q15084 440 aa14.43□□□□□ -0.1
VMP1-207ENST00000588131 DNAJC10Q8IXB1 793 aa14.43□□□□□ -0.1
VMP1-207ENST00000588131 DZIP1LQ8IYY4 767 aaKnown RBP14.43□□□□□ -0.1
VMP1-207ENST00000588131 VSIG10Q8N0Z9 540 aa14.43□□□□□ -0.1
VMP1-207ENST00000588131 ARHGAP45Q92619 1136 aa14.43□□□□□ -0.1
VMP1-207ENST00000588131 PHAXQ9H814 394 aaKnown RBP14.43□□□□□ -0.1
VMP1-207ENST00000588131 DBF4Q9UBU7 674 aaPredicted RBP14.43□□□□□ -0.1
VMP1-207ENST00000588131 CICQ96RK0 1608 aaPredicted RBP14.43□□□□□ -0.1
VMP1-207ENST00000588131 PTPRCP08575 1304 aa14.42□□□□□ -0.1
VMP1-207ENST00000588131 FLIIQ13045 1269 aa14.42□□□□□ -0.1
VMP1-207ENST00000588131 CHMP4AQ9BY43 222 aa14.42□□□□□ -0.1
VMP1-207ENST00000588131 COG6Q9Y2V7 657 aa14.42□□□□□ -0.1
VMP1-207ENST00000588131 ABCC4O15439 1325 aa14.41□□□□□ -0.1
VMP1-207ENST00000588131 PIP4K2AP48426 406 aaPredicted RBP14.41□□□□□ -0.1
VMP1-207ENST00000588131 FAM196AQ6ZSG2 479 aa14.41□□□□□ -0.1
VMP1-207ENST00000588131 FTSJ3Q8IY81 847 aaKnown RBP14.41□□□□□ -0.1
VMP1-207ENST00000588131 TMEM57Q8N5G2 664 aa14.41□□□□□ -0.1
VMP1-207ENST00000588131 SMARCC1Q92922 1105 aaPredicted RBP14.41□□□□□ -0.1
VMP1-207ENST00000588131 API5Q9BZZ5 524 aaKnown RBP14.41□□□□□ -0.1
VMP1-207ENST00000588131 DDX21Q9NR30 783 aaKnown RBP eCLIP14.41□□□□□ -0.1
VMP1-207ENST00000588131 ZNF831Q5JPB2 1677 aa14.4□□□□□ -0.1
VMP1-207ENST00000588131 MS4A1P11836 297 aa14.4□□□□□ -0.1
VMP1-207ENST00000588131 LRP10Q7Z4F1 713 aa14.4□□□□□ -0.1
VMP1-207ENST00000588131 LY75O60449 1722 aa14.39□□□□□ -0.11
VMP1-207ENST00000588131 COL5A3P25940 1745 aaPredicted RBP14.39□□□□□ -0.11
VMP1-207ENST00000588131 LOC102724428A0A0B4J2F2 783 aa14.39□□□□□ -0.11
VMP1-207ENST00000588131 NBPF26B4DH59 902 aa14.39□□□□□ -0.11
VMP1-207ENST00000588131 A1BGP04217 495 aa14.39□□□□□ -0.11
VMP1-207ENST00000588131 MYL6BP14649 208 aa14.39□□□□□ -0.11
VMP1-207ENST00000588131 SIK1P57059 783 aa14.39□□□□□ -0.11
VMP1-207ENST00000588131 FKBP5Q13451 457 aaPredicted RBP14.39□□□□□ -0.11
VMP1-207ENST00000588131 NBPF14Q5TI25 921 aa14.39□□□□□ -0.11
VMP1-207ENST00000588131 ERICH6BQ5W0A0 696 aa14.39□□□□□ -0.11
VMP1-207ENST00000588131 NBPF10Q6P3W6 841 aaKnown RBP14.39□□□□□ -0.11
VMP1-207ENST00000588131 NBPF15Q8N660 670 aa14.39□□□□□ -0.11
VMP1-207ENST00000588131 BCL11BQ9C0K0 894 aaPredicted RBP14.39□□□□□ -0.11
VMP1-207ENST00000588131 HYPKQ9NX55 129 aa14.39□□□□□ -0.11
VMP1-207ENST00000588131 ERBB4Q15303 1308 aa14.39□□□□□ -0.11
VMP1-207ENST00000588131 N4BP2Q86UW6 1770 aaPredicted RBP14.38□□□□□ -0.11
VMP1-207ENST00000588131 F6X3S4 739 aa14.38□□□□□ -0.11
VMP1-207ENST00000588131 CYP19A1P11511 503 aaPredicted RBP14.38□□□□□ -0.11
VMP1-207ENST00000588131 ATP6V1AP38606 617 aa14.38□□□□□ -0.11
VMP1-207ENST00000588131 ITPK1Q13572 414 aa14.38□□□□□ -0.11
VMP1-207ENST00000588131 MVPQ14764 893 aaKnown RBP14.38□□□□□ -0.11
VMP1-207ENST00000588131 TEX13AQ9BXU3 409 aaPredicted RBP14.38□□□□□ -0.11
VMP1-207ENST00000588131 RREB1Q92766 1687 aa14.38□□□□□ -0.11
VMP1-207ENST00000588131 TRIM37O94972 964 aa14.37□□□□□ -0.11
VMP1-207ENST00000588131 ADCY9O60503 1353 aa14.36□□□□□ -0.11
VMP1-207ENST00000588131 STARD3NLO95772 234 aa14.36□□□□□ -0.11
VMP1-207ENST00000588131 AIMP1Q12904 312 aaKnown RBP14.36□□□□□ -0.11
VMP1-207ENST00000588131 ITPRIPQ8IWB1 547 aa14.36□□□□□ -0.11
VMP1-207ENST00000588131 XAGE3Q8WTP9 111 aa14.36□□□□□ -0.11
VMP1-207ENST00000588131 PXDNLA1KZ92 1463 aa14.36□□□□□ -0.11
VMP1-207ENST00000588131 KCNQ4P56696 695 aa14.35□□□□□ -0.11
VMP1-207ENST00000588131 INTS3Q68E01 1043 aaKnown RBP14.35□□□□□ -0.11
VMP1-207ENST00000588131 SLC4A10Q6U841 1118 aa14.35□□□□□ -0.11
VMP1-207ENST00000588131 COPS6Q7L5N1 327 aa14.35□□□□□ -0.11
VMP1-207ENST00000588131 ZBTB1Q9Y2K1 713 aa14.35□□□□□ -0.11
VMP1-207ENST00000588131 TNS1Q9HBL0 1735 aaKnown RBP14.35□□□□□ -0.11
VMP1-207ENST00000588131 ARFGEF2Q9Y6D5 1785 aa14.34□□□□□ -0.11
VMP1-207ENST00000588131 PI4KAP2A4QPH2 592 aa14.34□□□□□ -0.11
VMP1-207ENST00000588131 PI4KAP1Q8N8J0 262 aa14.34□□□□□ -0.11
VMP1-207ENST00000588131 LINC00116Q8NCU8 138 aa14.34□□□□□ -0.11
VMP1-207ENST00000588131 PPP4R2Q9NY27 417 aa14.34□□□□□ -0.11
VMP1-207ENST00000588131 NUP188Q5SRE5 1749 aa14.34□□□□□ -0.11
VMP1-207ENST00000588131 INTS5Q6P9B9 1019 aaKnown RBP14.33□□□□□ -0.12
VMP1-207ENST00000588131 KSR2Q6VAB6 950 aa14.33□□□□□ -0.12
VMP1-207ENST00000588131 TTLL7Q6ZT98 887 aa14.33□□□□□ -0.12
VMP1-207ENST00000588131 DNAAF4Q8WXU2 420 aa14.33□□□□□ -0.12
VMP1-207ENST00000588131 DDX19BQ9UMR2 479 aa14.33□□□□□ -0.12
VMP1-207ENST00000588131 MAP3K2Q9Y2U5 619 aa14.33□□□□□ -0.12
VMP1-207ENST00000588131 TAF1LQ8IZX4 1826 aa14.33□□□□□ -0.12
VMP1-207ENST00000588131 MYH14Q7Z406 1995 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms