RNA–Protein interactions for RNA: ENST00000587997.6

GFAP-210, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 609 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-210ENST00000587997 TTC5Q8N0Z6 440 aa20.31■□□□□ 0.84
GFAP-210ENST00000587997 POLRMTO00411 1230 aaKnown RBP20.3■□□□□ 0.84
GFAP-210ENST00000587997 CHRNA5P30532 468 aa20.3■□□□□ 0.84
GFAP-210ENST00000587997 C9orf131Q5VYM1 1079 aa20.3■□□□□ 0.84
GFAP-210ENST00000587997 DLEC1Q9Y238 1755 aa20.29■□□□□ 0.84
GFAP-210ENST00000587997 PER1O15534 1290 aaPredicted RBP20.29■□□□□ 0.84
GFAP-210ENST00000587997 NARFQ9UHQ1 456 aa20.29■□□□□ 0.84
GFAP-210ENST00000587997 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
GFAP-210ENST00000587997 TM4SF1P30408 202 aa20.28■□□□□ 0.84
GFAP-210ENST00000587997 TEFQ10587 303 aa20.28■□□□□ 0.84
GFAP-210ENST00000587997 C16orf71Q8IYS4 520 aaPredicted RBP20.28■□□□□ 0.84
GFAP-210ENST00000587997 VSIG10Q8N0Z9 540 aa20.28■□□□□ 0.84
GFAP-210ENST00000587997 ZBTB1Q9Y2K1 713 aa20.28■□□□□ 0.84
GFAP-210ENST00000587997 CCDC88AQ3V6T2 1871 aa20.28■□□□□ 0.84
GFAP-210ENST00000587997 NRXN2Q9P2S2 1712 aa20.27■□□□□ 0.84
GFAP-210ENST00000587997 TOMM70O94826 608 aa20.27■□□□□ 0.84
GFAP-210ENST00000587997 CANXP27824 592 aaKnown RBP20.27■□□□□ 0.84
GFAP-210ENST00000587997 NMRK2Q9NPI5 230 aa20.27■□□□□ 0.84
GFAP-210ENST00000587997 RNF181Q9P0P0 153 aa20.27■□□□□ 0.84
GFAP-210ENST00000587997 TNRC6CQ9HCJ0 1690 aaKnown RBP20.26■□□□□ 0.83
GFAP-210ENST00000587997 COL3A1P02461 1466 aaPredicted RBP20.26■□□□□ 0.83
GFAP-210ENST00000587997 STARD3NLO95772 234 aa20.26■□□□□ 0.83
GFAP-210ENST00000587997 NFIXQ14938 502 aa20.25■□□□□ 0.83
GFAP-210ENST00000587997 GAS2L2Q8NHY3 880 aa20.25■□□□□ 0.83
GFAP-210ENST00000587997 KDM2BQ8NHM5 1336 aa20.25■□□□□ 0.83
GFAP-210ENST00000587997 NPC1L1Q9UHC9 1359 aa20.24■□□□□ 0.83
GFAP-210ENST00000587997 GNAT3A8MTJ3 354 aa20.24■□□□□ 0.83
GFAP-210ENST00000587997 APLP1P51693 650 aa20.24■□□□□ 0.83
GFAP-210ENST00000587997 ZNF330Q9Y3S2 320 aaPredicted RBP20.24■□□□□ 0.83
GFAP-210ENST00000587997 SCN7AQ01118 1682 aa20.23■□□□□ 0.83
GFAP-210ENST00000587997 SERPINB2P05120 415 aa20.23■□□□□ 0.83
GFAP-210ENST00000587997 BICDL1Q6ZP65 573 aa20.23■□□□□ 0.83
GFAP-210ENST00000587997 CFAP53Q96M91 514 aa20.23■□□□□ 0.83
GFAP-210ENST00000587997 WDR90Q96KV7 1748 aa20.22■□□□□ 0.83
GFAP-210ENST00000587997 A0A087WZG4 1122 aa20.22■□□□□ 0.83
GFAP-210ENST00000587997 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
GFAP-210ENST00000587997 TEX13AQ9BXU3 409 aaPredicted RBP20.21■□□□□ 0.83
GFAP-210ENST00000587997 CACNA1SQ13698 1873 aa20.21■□□□□ 0.83
GFAP-210ENST00000587997 TIAM2Q8IVF5 1701 aa20.21■□□□□ 0.83
GFAP-210ENST00000587997 HEG1Q9ULI3 1381 aa20.21■□□□□ 0.83
GFAP-210ENST00000587997 ZNF790Q6PG37 636 aa20.2■□□□□ 0.82
GFAP-210ENST00000587997 C2CD5Q86YS7 1000 aa20.2■□□□□ 0.82
GFAP-210ENST00000587997 ZNF496Q96IT1 587 aaPredicted RBP20.2■□□□□ 0.82
GFAP-210ENST00000587997 BCL2L12Q9HB09 334 aa20.2■□□□□ 0.82
GFAP-210ENST00000587997 ANKRD31Q8N7Z5 1873 aa20.2■□□□□ 0.82
GFAP-210ENST00000587997 H0YIN7 160 aa20.19■□□□□ 0.82
GFAP-210ENST00000587997 IL17REQ8NFR9 667 aa20.19■□□□□ 0.82
GFAP-210ENST00000587997 RBM46Q8TBY0 533 aaKnown RBP20.19■□□□□ 0.82
GFAP-210ENST00000587997 NPHP1O15259 732 aa20.18■□□□□ 0.82
GFAP-210ENST00000587997 EIF5P55010 431 aaKnown RBP20.18■□□□□ 0.82
GFAP-210ENST00000587997 RASSF7Q02833 373 aa20.18■□□□□ 0.82
GFAP-210ENST00000587997 TTLL6Q8N841 843 aa20.18■□□□□ 0.82
GFAP-210ENST00000587997 FMNL2Q96PY5 1086 aa20.18■□□□□ 0.82
GFAP-210ENST00000587997 IFFO2Q5TF58 517 aa20.17■□□□□ 0.82
GFAP-210ENST00000587997 RRAGCQ9HB90 399 aa20.17■□□□□ 0.82
GFAP-210ENST00000587997 NUDCQ9Y266 331 aa20.17■□□□□ 0.82
GFAP-210ENST00000587997 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
GFAP-210ENST00000587997 PRKAR2BP31323 418 aa20.16■□□□□ 0.82
GFAP-210ENST00000587997 CARMIL3Q8ND23 1372 aa20.16■□□□□ 0.82
GFAP-210ENST00000587997 BTBD11A6QL63 1104 aa20.15■□□□□ 0.82
GFAP-210ENST00000587997 LMNB1P20700 586 aa20.15■□□□□ 0.82
GFAP-210ENST00000587997 TBC1D9BQ66K14 1250 aa20.15■□□□□ 0.82
GFAP-210ENST00000587997 TBC1D2BQ9UPU7 963 aa20.15■□□□□ 0.82
GFAP-210ENST00000587997 COL11A2P13942 1736 aaPredicted RBP20.15■□□□□ 0.82
GFAP-210ENST00000587997 DICER1Q9UPY3 1922 aaKnown RBP20.14■□□□□ 0.81
GFAP-210ENST00000587997 ZC3H4Q9UPT8 1303 aaKnown RBP20.14■□□□□ 0.81
GFAP-210ENST00000587997 IL6STP40189 918 aaPredicted RBP20.14■□□□□ 0.81
GFAP-210ENST00000587997 ZNF622Q969S3 477 aaKnown RBP eCLIP20.14■□□□□ 0.81
GFAP-210ENST00000587997 PDE6BP35913 854 aa20.13■□□□□ 0.81
GFAP-210ENST00000587997 FSTL1Q12841 308 aa20.13■□□□□ 0.81
GFAP-210ENST00000587997 RTF1Q92541 710 aaKnown RBP20.13■□□□□ 0.81
GFAP-210ENST00000587997 RSPH6AQ9H0K4 717 aa20.13■□□□□ 0.81
GFAP-210ENST00000587997 CEMIPQ8WUJ3 1361 aa20.12■□□□□ 0.81
GFAP-210ENST00000587997 A1BGP04217 495 aa20.12■□□□□ 0.81
GFAP-210ENST00000587997 U2AF1L5P0DN76 240 aaPredicted RBP20.12■□□□□ 0.81
GFAP-210ENST00000587997 U2AF1Q01081 240 aaKnown RBP eCLIP20.12■□□□□ 0.81
GFAP-210ENST00000587997 PHACTR3Q96KR7 559 aa20.12■□□□□ 0.81
GFAP-210ENST00000587997 ZNF219Q9P2Y4 722 aaPredicted RBP20.12■□□□□ 0.81
GFAP-210ENST00000587997 PDZRN3Q9UPQ7 1066 aa20.12■□□□□ 0.81
GFAP-210ENST00000587997 FER1L6Q2WGJ9 1857 aa20.11■□□□□ 0.81
GFAP-210ENST00000587997 CCDC24Q8N4L8 307 aa20.11■□□□□ 0.81
GFAP-210ENST00000587997 SETDB2Q96T68 719 aa20.11■□□□□ 0.81
GFAP-210ENST00000587997 CNBD1Q8NA66 436 aa20.1■□□□□ 0.81
GFAP-210ENST00000587997 BRIP1Q9BX63 1249 aa20.1■□□□□ 0.81
GFAP-210ENST00000587997 ARFGEF2Q9Y6D5 1785 aa20.1■□□□□ 0.81
GFAP-210ENST00000587997 KCNQ3O43525 872 aa20.09■□□□□ 0.81
GFAP-210ENST00000587997 ST5P78524 1137 aa20.09■□□□□ 0.81
GFAP-210ENST00000587997 PRR5LQ6MZQ0 368 aa20.09■□□□□ 0.81
GFAP-210ENST00000587997 DZIP3Q86Y13 1208 aaKnown RBP20.09■□□□□ 0.81
GFAP-210ENST00000587997 SMC1BQ8NDV3 1235 aa20.09■□□□□ 0.81
GFAP-210ENST00000587997 DLG5Q8TDM6 1919 aa20.08■□□□□ 0.81
GFAP-210ENST00000587997 GLTPD2A6NH11 291 aa20.08■□□□□ 0.81
GFAP-210ENST00000587997 SLX4Q8IY92 1834 aa20.07■□□□□ 0.8
GFAP-210ENST00000587997 C21orf2O43822 256 aa20.07■□□□□ 0.8
GFAP-210ENST00000587997 CAMTA2O94983 1202 aa20.07■□□□□ 0.8
GFAP-210ENST00000587997 VEGFAP15692 232 aaPredicted RBP20.07■□□□□ 0.8
GFAP-210ENST00000587997 PPP2R1AP30153 589 aa20.07■□□□□ 0.8
GFAP-210ENST00000587997 MCM10Q7L590 875 aa20.07■□□□□ 0.8
GFAP-210ENST00000587997 DNAJC5GQ8N7S2 189 aa20.07■□□□□ 0.8
GFAP-210ENST00000587997 LAMB4A4D0S4 1761 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms