RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 AKAP4Q5JQC9 854 aa8.71□□□□□ -1.02
SDF2-205ENST00000587629 DNAJC10Q8IXB1 793 aa8.71□□□□□ -1.02
SDF2-205ENST00000587629 PLEKHG2Q9H7P9 1386 aa8.71□□□□□ -1.02
SDF2-205ENST00000587629 KIF3CO14782 793 aa8.7□□□□□ -1.02
SDF2-205ENST00000587629 HSPA6P17066 643 aa8.7□□□□□ -1.02
SDF2-205ENST00000587629 KCNA3P22001 575 aa8.7□□□□□ -1.02
SDF2-205ENST00000587629 CHRNA5P30532 468 aa8.7□□□□□ -1.02
SDF2-205ENST00000587629 DDR1Q08345 913 aa8.7□□□□□ -1.02
SDF2-205ENST00000587629 MTHFSDQ2M296 383 aaKnown RBP8.7□□□□□ -1.02
SDF2-205ENST00000587629 USPL1Q5W0Q7 1092 aa8.7□□□□□ -1.02
SDF2-205ENST00000587629 SLC52A2Q9HAB3 445 aa8.7□□□□□ -1.02
SDF2-205ENST00000587629 USP42Q9H9J4 1324 aaKnown RBP8.7□□□□□ -1.02
SDF2-205ENST00000587629 C10orf71Q711Q0 1435 aa8.7□□□□□ -1.02
SDF2-205ENST00000587629 COL5A3P25940 1745 aaPredicted RBP8.69□□□□□ -1.02
SDF2-205ENST00000587629 RNMTO43148 476 aaKnown RBP8.69□□□□□ -1.02
SDF2-205ENST00000587629 DIAPH1O60610 1272 aaKnown RBP8.69□□□□□ -1.02
SDF2-205ENST00000587629 ZPR1O75312 459 aa8.69□□□□□ -1.02
SDF2-205ENST00000587629 PRKAR2AP13861 404 aaKnown RBP8.69□□□□□ -1.02
SDF2-205ENST00000587629 PIM2Q9P1W9 311 aa8.69□□□□□ -1.02
SDF2-205ENST00000587629 MYH14Q7Z406 1995 aaKnown RBP8.69□□□□□ -1.02
SDF2-205ENST00000587629 C4AP0C0L4 1744 aa8.68□□□□□ -1.02
SDF2-205ENST00000587629 POLRMTO00411 1230 aaKnown RBP8.68□□□□□ -1.02
SDF2-205ENST00000587629 U2SURPO15042 1029 aaKnown RBP8.68□□□□□ -1.02
SDF2-205ENST00000587629 GABBR2O75899 941 aa8.68□□□□□ -1.02
SDF2-205ENST00000587629 CYP19A1P11511 503 aaPredicted RBP8.68□□□□□ -1.02
SDF2-205ENST00000587629 CANXP27824 592 aaKnown RBP8.68□□□□□ -1.02
SDF2-205ENST00000587629 DALRD3Q5D0E6 543 aaKnown RBP8.68□□□□□ -1.02
SDF2-205ENST00000587629 C9orf131Q5VYM1 1079 aa8.68□□□□□ -1.02
SDF2-205ENST00000587629 NMRK2Q9NPI5 230 aa8.68□□□□□ -1.02
SDF2-205ENST00000587629 ZNF831Q5JPB2 1677 aa8.68□□□□□ -1.02
SDF2-205ENST00000587629 KIAA1551Q9HCM1 1747 aa8.68□□□□□ -1.02
SDF2-205ENST00000587629 PER1O15534 1290 aaPredicted RBP8.67□□□□□ -1.02
SDF2-205ENST00000587629 TM4SF1P30408 202 aa8.67□□□□□ -1.02
SDF2-205ENST00000587629 TJP1Q07157 1748 aa8.67□□□□□ -1.02
SDF2-205ENST00000587629 KIF13BQ9NQT8 1826 aa8.67□□□□□ -1.02
SDF2-205ENST00000587629 SOS1Q07889 1333 aaPredicted RBP8.66□□□□□ -1.02
SDF2-205ENST00000587629 NFIXQ14938 502 aa8.66□□□□□ -1.02
SDF2-205ENST00000587629 BICDL1Q6ZP65 573 aa8.66□□□□□ -1.02
SDF2-205ENST00000587629 RNF181Q9P0P0 153 aa8.66□□□□□ -1.02
SDF2-205ENST00000587629 NARFQ9UHQ1 456 aa8.66□□□□□ -1.02
SDF2-205ENST00000587629 ZBTB1Q9Y2K1 713 aa8.66□□□□□ -1.02
SDF2-205ENST00000587629 ZNF330Q9Y3S2 320 aaPredicted RBP8.66□□□□□ -1.02
SDF2-205ENST00000587629 SCN11AQ9UI33 1791 aa8.66□□□□□ -1.02
SDF2-205ENST00000587629 COL15A1P39059 1388 aa8.65□□□□□ -1.02
SDF2-205ENST00000587629 TOMM70O94826 608 aa8.65□□□□□ -1.02
SDF2-205ENST00000587629 TTC5Q8N0Z6 440 aa8.65□□□□□ -1.02
SDF2-205ENST00000587629 BCL2L12Q9HB09 334 aa8.65□□□□□ -1.02
SDF2-205ENST00000587629 C19orf67A6NJJ6 358 aa8.64□□□□□ -1.03
SDF2-205ENST00000587629 GNAT3A8MTJ3 354 aa8.64□□□□□ -1.03
SDF2-205ENST00000587629 STARD3NLO95772 234 aa8.64□□□□□ -1.03
SDF2-205ENST00000587629 SERPINB2P05120 415 aa8.64□□□□□ -1.03
SDF2-205ENST00000587629 RASSF7Q02833 373 aa8.64□□□□□ -1.03
SDF2-205ENST00000587629 TEFQ10587 303 aa8.64□□□□□ -1.03
SDF2-205ENST00000587629 C16orf71Q8IYS4 520 aaPredicted RBP8.64□□□□□ -1.03
SDF2-205ENST00000587629 CCDC24Q8N4L8 307 aa8.64□□□□□ -1.03
SDF2-205ENST00000587629 IL17REQ8NFR9 667 aa8.64□□□□□ -1.03
SDF2-205ENST00000587629 ZNF496Q96IT1 587 aaPredicted RBP8.64□□□□□ -1.03
SDF2-205ENST00000587629 RRAGCQ9HB90 399 aa8.64□□□□□ -1.03
SDF2-205ENST00000587629 CLEC11AQ9Y240 323 aa8.64□□□□□ -1.03
SDF2-205ENST00000587629 KCPQ6ZWJ8 1503 aa8.64□□□□□ -1.03
SDF2-205ENST00000587629 APLP1P51693 650 aa8.63□□□□□ -1.03
SDF2-205ENST00000587629 HTRA3P83110 453 aa8.63□□□□□ -1.03
SDF2-205ENST00000587629 C2CD5Q86YS7 1000 aa8.63□□□□□ -1.03
SDF2-205ENST00000587629 VSIG10Q8N0Z9 540 aa8.63□□□□□ -1.03
SDF2-205ENST00000587629 PHACTR3Q96KR7 559 aa8.63□□□□□ -1.03
SDF2-205ENST00000587629 TBC1D2BQ9UPU7 963 aa8.63□□□□□ -1.03
SDF2-205ENST00000587629 MRC1P22897 1456 aa8.63□□□□□ -1.03
SDF2-205ENST00000587629 ADAMTS7Q9UKP4 1686 aa8.62□□□□□ -1.03
SDF2-205ENST00000587629 H0YIN7 160 aa8.62□□□□□ -1.03
SDF2-205ENST00000587629 KCNQ3O43525 872 aa8.62□□□□□ -1.03
SDF2-205ENST00000587629 A1BGP04217 495 aa8.62□□□□□ -1.03
SDF2-205ENST00000587629 IFFO2Q5TF58 517 aa8.62□□□□□ -1.03
SDF2-205ENST00000587629 TBC1D9BQ66K14 1250 aa8.62□□□□□ -1.03
SDF2-205ENST00000587629 ZNF790Q6PG37 636 aa8.62□□□□□ -1.03
SDF2-205ENST00000587629 GAS2L2Q8NHY3 880 aa8.62□□□□□ -1.03
SDF2-205ENST00000587629 BRCA1P38398 1863 aaKnown RBP8.62□□□□□ -1.03
SDF2-205ENST00000587629 CARMIL3Q8ND23 1372 aa8.61□□□□□ -1.03
SDF2-205ENST00000587629 KDM2BQ8NHM5 1336 aa8.61□□□□□ -1.03
SDF2-205ENST00000587629 A0A087WZG4 1122 aa8.61□□□□□ -1.03
SDF2-205ENST00000587629 PRKAR2BP31323 418 aa8.61□□□□□ -1.03
SDF2-205ENST00000587629 PIP4K2AP48426 406 aaPredicted RBP8.61□□□□□ -1.03
SDF2-205ENST00000587629 PRELPP51888 382 aa8.61□□□□□ -1.03
SDF2-205ENST00000587629 EIF5P55010 431 aaKnown RBP8.61□□□□□ -1.03
SDF2-205ENST00000587629 DNAJC5GQ8N7S2 189 aa8.61□□□□□ -1.03
SDF2-205ENST00000587629 TTLL6Q8N841 843 aa8.61□□□□□ -1.03
SDF2-205ENST00000587629 ZNF622Q969S3 477 aaKnown RBP eCLIP8.61□□□□□ -1.03
SDF2-205ENST00000587629 HEG1Q9ULI3 1381 aa8.61□□□□□ -1.03
SDF2-205ENST00000587629 COL3A1P02461 1466 aaPredicted RBP8.6□□□□□ -1.03
SDF2-205ENST00000587629 ARFGEF1Q9Y6D6 1849 aa8.6□□□□□ -1.03
SDF2-205ENST00000587629 BTBD11A6QL63 1104 aa8.6□□□□□ -1.03
SDF2-205ENST00000587629 NPHP1O15259 732 aa8.6□□□□□ -1.03
SDF2-205ENST00000587629 NPM2Q86SE8 214 aaKnown RBP8.6□□□□□ -1.03
SDF2-205ENST00000587629 RBM46Q8TBY0 533 aaKnown RBP8.6□□□□□ -1.03
SDF2-205ENST00000587629 CFAP53Q96M91 514 aa8.6□□□□□ -1.03
SDF2-205ENST00000587629 FMNL2Q96PY5 1086 aa8.6□□□□□ -1.03
SDF2-205ENST00000587629 TEX13AQ9BXU3 409 aaPredicted RBP8.6□□□□□ -1.03
SDF2-205ENST00000587629 VIRMAQ69YN4 1812 aaKnown RBP8.59□□□□□ -1.03
SDF2-205ENST00000587629 PRAMEF22A3QJZ6 481 aa8.59□□□□□ -1.03
SDF2-205ENST00000587629 C21orf2O43822 256 aa8.59□□□□□ -1.03
SDF2-205ENST00000587629 U2AF1L5P0DN76 240 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms