RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 LTV1Q96GA3 475 aaPredicted RBP11.31□□□□□ -0.6
NEDD4L-218ENST00000587547 POLKQ9UBT6 870 aa11.31□□□□□ -0.6
NEDD4L-218ENST00000587547 PXDNLA1KZ92 1463 aa11.31□□□□□ -0.6
NEDD4L-218ENST00000587547 MEGF6O75095 1541 aa11.3□□□□□ -0.6
NEDD4L-218ENST00000587547 SMG6Q86US8 1419 aaKnown RBP11.3□□□□□ -0.6
NEDD4L-218ENST00000587547 PHF14O94880 888 aa11.3□□□□□ -0.6
NEDD4L-218ENST00000587547 MTHFSP49914 203 aa11.3□□□□□ -0.6
NEDD4L-218ENST00000587547 FSTL1Q12841 308 aa11.3□□□□□ -0.6
NEDD4L-218ENST00000587547 FAM208AQ9UK61 1670 aaKnown RBP11.3□□□□□ -0.6
NEDD4L-218ENST00000587547 C16orf71Q8IYS4 520 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-218ENST00000587547 KCNV2Q8TDN2 545 aa11.29□□□□□ -0.6
NEDD4L-218ENST00000587547 BCS1LQ9Y276 419 aa11.29□□□□□ -0.6
NEDD4L-218ENST00000587547 C4BP0C0L5 1744 aa11.29□□□□□ -0.6
NEDD4L-218ENST00000587547 RTL1A6NKG5 1358 aa11.28□□□□□ -0.6
NEDD4L-218ENST00000587547 FLT4P35916 1363 aa11.28□□□□□ -0.6
NEDD4L-218ENST00000587547 PALLDQ8WX93 1383 aa11.28□□□□□ -0.6
NEDD4L-218ENST00000587547 TAF1LQ8IZX4 1826 aa11.28□□□□□ -0.6
NEDD4L-218ENST00000587547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.28□□□□□ -0.6
NEDD4L-218ENST00000587547 HOXC9P31274 260 aa11.28□□□□□ -0.6
NEDD4L-218ENST00000587547 ARHGAP27Q6ZUM4 889 aa11.28□□□□□ -0.6
NEDD4L-218ENST00000587547 ZCRB1Q8TBF4 217 aaKnown RBP11.28□□□□□ -0.6
NEDD4L-218ENST00000587547 KIAA1551Q9HCM1 1747 aa11.28□□□□□ -0.6
NEDD4L-218ENST00000587547 KCPQ6ZWJ8 1503 aa11.28□□□□□ -0.6
NEDD4L-218ENST00000587547 COL3A1P02461 1466 aaPredicted RBP11.27□□□□□ -0.6
NEDD4L-218ENST00000587547 HSP90AB2PQ58FF8 381 aa11.27□□□□□ -0.61
NEDD4L-218ENST00000587547 C9orf131Q5VYM1 1079 aa11.27□□□□□ -0.61
NEDD4L-218ENST00000587547 IP6K1Q92551 441 aa11.27□□□□□ -0.61
NEDD4L-218ENST00000587547 AK7Q96M32 723 aa11.27□□□□□ -0.61
NEDD4L-218ENST00000587547 CFAP53Q96M91 514 aa11.27□□□□□ -0.61
NEDD4L-218ENST00000587547 UBR3Q6ZT12 1888 aa11.26□□□□□ -0.61
NEDD4L-218ENST00000587547 A0A0G2JLW4 131 aa11.26□□□□□ -0.61
NEDD4L-218ENST00000587547 CCDC184Q52MB2 194 aa11.26□□□□□ -0.61
NEDD4L-218ENST00000587547 MRS2Q9HD23 443 aa11.26□□□□□ -0.61
NEDD4L-218ENST00000587547 KIF24Q5T7B8 1368 aa11.26□□□□□ -0.61
NEDD4L-218ENST00000587547 N4BP2Q86UW6 1770 aaPredicted RBP11.26□□□□□ -0.61
NEDD4L-218ENST00000587547 MMP10P09238 476 aa11.25□□□□□ -0.61
NEDD4L-218ENST00000587547 VIRMAQ69YN4 1812 aaKnown RBP11.25□□□□□ -0.61
NEDD4L-218ENST00000587547 INSRP06213 1382 aa11.25□□□□□ -0.61
NEDD4L-218ENST00000587547 PLEKHG2Q9H7P9 1386 aa11.25□□□□□ -0.61
NEDD4L-218ENST00000587547 RRAGCQ9HB90 399 aa11.24□□□□□ -0.61
NEDD4L-218ENST00000587547 C10orf71Q711Q0 1435 aa11.24□□□□□ -0.61
NEDD4L-218ENST00000587547 CCER2I3L3R5 266 aa11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 DIAPH1O60610 1272 aaKnown RBP11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 FCHSD2O94868 740 aa11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 DPEP1P16444 411 aa11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 SSFA2P28290 1259 aa11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 EIF4A2Q14240 407 aaKnown RBP11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 MPRIPQ6WCQ1 1025 aa11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 LINC00116Q8NCU8 138 aa11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 SMC1BQ8NDV3 1235 aa11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 MS4A3Q96HJ5 214 aa11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 TMEM106CQ9BVX2 250 aa11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 TRPC6Q9Y210 931 aa11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 KIF13BQ9NQT8 1826 aa11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 DLG5Q8TDM6 1919 aa11.23□□□□□ -0.61
NEDD4L-218ENST00000587547 C19orf67A6NJJ6 358 aa11.22□□□□□ -0.61
NEDD4L-218ENST00000587547 U2SURPO15042 1029 aaKnown RBP11.22□□□□□ -0.61
NEDD4L-218ENST00000587547 TGFB2P61812 414 aa11.22□□□□□ -0.61
NEDD4L-218ENST00000587547 PKD1L3Q7Z443 1732 aa11.22□□□□□ -0.61
NEDD4L-218ENST00000587547 USHBP1Q8N6Y0 703 aa11.22□□□□□ -0.61
NEDD4L-218ENST00000587547 KDM2BQ8NHM5 1336 aa11.22□□□□□ -0.61
NEDD4L-218ENST00000587547 MS4A4AQ96JQ5 239 aa11.22□□□□□ -0.61
NEDD4L-218ENST00000587547 GOLGA2Q08379 1002 aa11.21□□□□□ -0.61
NEDD4L-218ENST00000587547 NUDCQ9Y266 331 aa11.21□□□□□ -0.61
NEDD4L-218ENST00000587547 GNPATO15228 680 aa11.2□□□□□ -0.62
NEDD4L-218ENST00000587547 KCNA3P22001 575 aa11.2□□□□□ -0.62
NEDD4L-218ENST00000587547 IL13P35225 146 aa11.2□□□□□ -0.62
NEDD4L-218ENST00000587547 WDR43Q15061 677 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEDD4L-218ENST00000587547 NBPF6Q5VWK0 638 aa11.2□□□□□ -0.62
NEDD4L-218ENST00000587547 NBPF4Q96M43 638 aa11.2□□□□□ -0.62
NEDD4L-218ENST00000587547 RNF181Q9P0P0 153 aa11.2□□□□□ -0.62
NEDD4L-218ENST00000587547 TNRC6CQ9HCJ0 1690 aaKnown RBP11.2□□□□□ -0.62
NEDD4L-218ENST00000587547 BRCA1P38398 1863 aaKnown RBP11.19□□□□□ -0.62
NEDD4L-218ENST00000587547 U2AF1L5P0DN76 240 aaPredicted RBP11.19□□□□□ -0.62
NEDD4L-218ENST00000587547 HMGB2P26583 209 aaKnown RBP11.19□□□□□ -0.62
NEDD4L-218ENST00000587547 U2AF1Q01081 240 aaKnown RBP eCLIP11.19□□□□□ -0.62
NEDD4L-218ENST00000587547 ITPK1Q13572 414 aa11.19□□□□□ -0.62
NEDD4L-218ENST00000587547 FAM161AQ3B820 660 aa11.19□□□□□ -0.62
NEDD4L-218ENST00000587547 FAM9BQ8IZU0 186 aa11.19□□□□□ -0.62
NEDD4L-218ENST00000587547 SMARCC1Q92922 1105 aaPredicted RBP11.19□□□□□ -0.62
NEDD4L-218ENST00000587547 PCDH10Q9P2E7 1040 aa11.19□□□□□ -0.62
NEDD4L-218ENST00000587547 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
NEDD4L-218ENST00000587547 CYP27B1O15528 508 aa11.18□□□□□ -0.62
NEDD4L-218ENST00000587547 HMOX1P09601 288 aa11.18□□□□□ -0.62
NEDD4L-218ENST00000587547 SIK1P57059 783 aa11.18□□□□□ -0.62
NEDD4L-218ENST00000587547 PIGBQ92521 554 aa11.18□□□□□ -0.62
NEDD4L-218ENST00000587547 DCAF5Q96JK2 942 aa11.18□□□□□ -0.62
NEDD4L-218ENST00000587547 EYA1Q99502 592 aa11.18□□□□□ -0.62
NEDD4L-218ENST00000587547 PCDH11XQ9BZA7 1347 aa11.17□□□□□ -0.62
NEDD4L-218ENST00000587547 PCDH11YQ9BZA8 1340 aa11.17□□□□□ -0.62
NEDD4L-218ENST00000587547 FOXN1O15353 648 aa11.17□□□□□ -0.62
NEDD4L-218ENST00000587547 SULT6B1Q6IMI4 303 aa11.17□□□□□ -0.62
NEDD4L-218ENST00000587547 AEBP1Q8IUX7 1158 aa11.17□□□□□ -0.62
NEDD4L-218ENST00000587547 PNISRQ8TF01 805 aaKnown RBP11.17□□□□□ -0.62
NEDD4L-218ENST00000587547 RAPGEF4Q8WZA2 1011 aa11.17□□□□□ -0.62
NEDD4L-218ENST00000587547 TATP17735 454 aaPredicted RBP11.16□□□□□ -0.62
NEDD4L-218ENST00000587547 E2F4Q16254 413 aa11.16□□□□□ -0.62
NEDD4L-218ENST00000587547 CCDC87Q9NVE4 849 aa11.16□□□□□ -0.62
NEDD4L-218ENST00000587547 ITGB4P16144 1822 aa11.16□□□□□ -0.62
NEDD4L-218ENST00000587547 ARFGEF1Q9Y6D6 1849 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms