RNA–Protein interactions for RNA: ENST00000587342.1

CXXC1-209, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-209ENST00000587342 RALBP1Q15311 655 aa21.47■■□□□ 1.03
CXXC1-209ENST00000587342 WWC3Q9ULE0 1092 aa21.46■■□□□ 1.03
CXXC1-209ENST00000587342 N4BP2Q86UW6 1770 aaPredicted RBP21.45■■□□□ 1.02
CXXC1-209ENST00000587342 BTBD11A6QL63 1104 aa21.44■■□□□ 1.02
CXXC1-209ENST00000587342 USPL1Q5W0Q7 1092 aa21.44■■□□□ 1.02
CXXC1-209ENST00000587342 BCL2L12Q9HB09 334 aa21.44■■□□□ 1.02
CXXC1-209ENST00000587342 PRAMEF22A3QJZ6 481 aa21.43■■□□□ 1.02
CXXC1-209ENST00000587342 CANXP27824 592 aaKnown RBP21.43■■□□□ 1.02
CXXC1-209ENST00000587342 SCN7AQ01118 1682 aa21.43■■□□□ 1.02
CXXC1-209ENST00000587342 RTF1Q92541 710 aaKnown RBP21.42■■□□□ 1.02
CXXC1-209ENST00000587342 FMNL2Q96PY5 1086 aa21.42■■□□□ 1.02
CXXC1-209ENST00000587342 MYBBP1AQ9BQG0 1328 aaKnown RBP21.42■■□□□ 1.02
CXXC1-209ENST00000587342 HTATSF1O43719 755 aaKnown RBP21.41■■□□□ 1.02
CXXC1-209ENST00000587342 EIF5P55010 431 aaKnown RBP21.41■■□□□ 1.02
CXXC1-209ENST00000587342 ZNF784Q8NCA9 323 aaPredicted RBP21.41■■□□□ 1.02
CXXC1-209ENST00000587342 NARFQ9UHQ1 456 aa21.41■■□□□ 1.02
CXXC1-209ENST00000587342 KDM3BQ7LBC6 1761 aa21.41■■□□□ 1.02
CXXC1-209ENST00000587342 POLRMTO00411 1230 aaKnown RBP21.4■■□□□ 1.02
CXXC1-209ENST00000587342 STARD3NLO95772 234 aa21.4■■□□□ 1.02
CXXC1-209ENST00000587342 TM4SF1P30408 202 aa21.4■■□□□ 1.02
CXXC1-209ENST00000587342 THUMPD2Q9BTF0 503 aaKnown RBP21.4■■□□□ 1.02
CXXC1-209ENST00000587342 PARP3Q9Y6F1 533 aa21.4■■□□□ 1.02
CXXC1-209ENST00000587342 BRCA1P38398 1863 aaKnown RBP21.39■■□□□ 1.02
CXXC1-209ENST00000587342 NRXN2Q9P2S2 1712 aa21.39■■□□□ 1.01
CXXC1-209ENST00000587342 NFE2L2Q16236 605 aa21.39■■□□□ 1.01
CXXC1-209ENST00000587342 ZPR1O75312 459 aa21.38■■□□□ 1.01
CXXC1-209ENST00000587342 A1BGP04217 495 aa21.38■■□□□ 1.01
CXXC1-209ENST00000587342 NFIXQ14938 502 aa21.38■■□□□ 1.01
CXXC1-209ENST00000587342 MIS18AQ9NYP9 233 aa21.38■■□□□ 1.01
CXXC1-209ENST00000587342 AFDNP55196 1824 aaKnown RBP21.38■■□□□ 1.01
CXXC1-209ENST00000587342 A0A0G2JLW4 131 aa21.37■■□□□ 1.01
CXXC1-209ENST00000587342 GRIN3BO60391 1043 aa21.37■■□□□ 1.01
CXXC1-209ENST00000587342 DPEP1P16444 411 aa21.37■■□□□ 1.01
CXXC1-209ENST00000587342 PIP4K2AP48426 406 aaPredicted RBP21.37■■□□□ 1.01
CXXC1-209ENST00000587342 USP16Q9Y5T5 823 aa21.37■■□□□ 1.01
CXXC1-209ENST00000587342 TEX13AQ9BXU3 409 aaPredicted RBP21.36■■□□□ 1.01
CXXC1-209ENST00000587342 LAMB4A4D0S4 1761 aa21.36■■□□□ 1.01
CXXC1-209ENST00000587342 BCORQ6W2J9 1755 aa21.36■■□□□ 1.01
CXXC1-209ENST00000587342 TGFB2P61812 414 aa21.35■■□□□ 1.01
CXXC1-209ENST00000587342 MAPK8IP3Q9UPT6 1336 aa21.34■■□□□ 1.01
CXXC1-209ENST00000587342 KCNA3P22001 575 aa21.34■■□□□ 1.01
CXXC1-209ENST00000587342 TAF7Q15545 349 aaPredicted RBP21.34■■□□□ 1.01
CXXC1-209ENST00000587342 PRKRIP1Q9H875 184 aaPredicted RBP21.34■■□□□ 1.01
CXXC1-209ENST00000587342 ZNF330Q9Y3S2 320 aaPredicted RBP21.34■■□□□ 1.01
CXXC1-209ENST00000587342 CARMIL3Q8ND23 1372 aa21.34■■□□□ 1.01
CXXC1-209ENST00000587342 IL6STP40189 918 aaPredicted RBP21.33■■□□□ 1.01
CXXC1-209ENST00000587342 TBC1D2BQ9UPU7 963 aa21.33■■□□□ 1.01
CXXC1-209ENST00000587342 NEFMP07197 916 aa21.32■■□□□ 1
CXXC1-209ENST00000587342 SNRPA1P09661 255 aaKnown RBP21.32■■□□□ 1
CXXC1-209ENST00000587342 ADCY9O60503 1353 aa21.32■■□□□ 1
CXXC1-209ENST00000587342 NBPF26B4DH59 902 aa21.31■■□□□ 1
CXXC1-209ENST00000587342 CAMTA2O94983 1202 aa21.31■■□□□ 1
CXXC1-209ENST00000587342 NBPF10Q6P3W6 841 aaKnown RBP21.31■■□□□ 1
CXXC1-209ENST00000587342 CCDC146Q8IYE0 955 aa21.31■■□□□ 1
CXXC1-209ENST00000587342 NBPF15Q8N660 670 aa21.31■■□□□ 1
CXXC1-209ENST00000587342 A0A087WZG4 1122 aa21.3■■□□□ 1
CXXC1-209ENST00000587342 CHRNA5P30532 468 aa21.3■■□□□ 1
CXXC1-209ENST00000587342 TBC1D9BQ66K14 1250 aa21.3■■□□□ 1
CXXC1-209ENST00000587342 BICDL1Q6ZP65 573 aa21.29■■□□□ 1
CXXC1-209ENST00000587342 PNNQ9H307 717 aaKnown RBP21.29■■□□□ 1
CXXC1-209ENST00000587342 BCS1LQ9Y276 419 aa21.29■■□□□ 1
CXXC1-209ENST00000587342 RRP7AQ9Y3A4 280 aaKnown RBP21.29■■□□□ 1
CXXC1-209ENST00000587342 ANKRD31Q8N7Z5 1873 aa21.28■■□□□ 1
CXXC1-209ENST00000587342 SERPINB2P05120 415 aa21.28■■□□□ 1
CXXC1-209ENST00000587342 TMPOP42166 694 aaKnown RBP21.28■■□□□ 1
CXXC1-209ENST00000587342 ATP10DQ9P241 1426 aa21.28■■□□□ 1
CXXC1-209ENST00000587342 DLEC1Q9Y238 1755 aa21.28■■□□□ 1
CXXC1-209ENST00000587342 ARFGEF1Q9Y6D6 1849 aa21.27■■□□□ 1
CXXC1-209ENST00000587342 RIPK4P57078 832 aa21.27■■□□□ 1
CXXC1-209ENST00000587342 EIF4A1P60842 406 aaKnown RBP21.27■■□□□ 1
CXXC1-209ENST00000587342 GIGYF1O75420 1035 aaPredicted RBP21.26■□□□□ 0.99
CXXC1-209ENST00000587342 ZEB1P37275 1124 aaPredicted RBP21.26■□□□□ 0.99
CXXC1-209ENST00000587342 DZIP3Q86Y13 1208 aaKnown RBP21.26■□□□□ 0.99
CXXC1-209ENST00000587342 ADAMTS8Q9UP79 889 aa21.26■□□□□ 0.99
CXXC1-209ENST00000587342 COL11A2P13942 1736 aaPredicted RBP21.26■□□□□ 0.99
CXXC1-209ENST00000587342 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
CXXC1-209ENST00000587342 WDR43Q15061 677 aaKnown RBP eCLIP21.23■□□□□ 0.99
CXXC1-209ENST00000587342 CCDC24Q8N4L8 307 aa21.23■□□□□ 0.99
CXXC1-209ENST00000587342 PIM2Q9P1W9 311 aa21.23■□□□□ 0.99
CXXC1-209ENST00000587342 PRR5LQ6MZQ0 368 aa21.22■□□□□ 0.99
CXXC1-209ENST00000587342 RUNDC1Q96C34 613 aa21.22■□□□□ 0.99
CXXC1-209ENST00000587342 TRIM35Q9UPQ4 493 aa21.22■□□□□ 0.99
CXXC1-209ENST00000587342 NEUROD2Q15784 382 aa21.21■□□□□ 0.99
CXXC1-209ENST00000587342 DALRD3Q5D0E6 543 aaKnown RBP21.21■□□□□ 0.99
CXXC1-209ENST00000587342 TSPYL4Q9UJ04 414 aa21.21■□□□□ 0.99
CXXC1-209ENST00000587342 CCDC184Q52MB2 194 aa21.2■□□□□ 0.98
CXXC1-209ENST00000587342 LMOD3Q0VAK6 560 aa21.18■□□□□ 0.98
CXXC1-209ENST00000587342 HLFQ16534 295 aa21.18■□□□□ 0.98
CXXC1-209ENST00000587342 ARHGAP27Q6ZUM4 889 aa21.18■□□□□ 0.98
CXXC1-209ENST00000587342 C2CD5Q86YS7 1000 aa21.18■□□□□ 0.98
CXXC1-209ENST00000587342 NPM2Q86SE8 214 aaKnown RBP21.17■□□□□ 0.98
CXXC1-209ENST00000587342 SETDB2Q96T68 719 aa21.17■□□□□ 0.98
CXXC1-209ENST00000587342 KRT24Q2M2I5 525 aa21.16■□□□□ 0.98
CXXC1-209ENST00000587342 CLEC4GQ6UXB4 293 aa21.16■□□□□ 0.98
CXXC1-209ENST00000587342 TTLL7Q6ZT98 887 aa21.16■□□□□ 0.98
CXXC1-209ENST00000587342 LRP10Q7Z4F1 713 aa21.16■□□□□ 0.98
CXXC1-209ENST00000587342 CNBD1Q8NA66 436 aa21.16■□□□□ 0.98
CXXC1-209ENST00000587342 NGEFQ8N5V2 710 aa21.15■□□□□ 0.98
CXXC1-209ENST00000587342 ZNF526Q8TF50 670 aaPredicted RBP21.15■□□□□ 0.98
CXXC1-209ENST00000587342 BRIP1Q9BX63 1249 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms