RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SPATA31A5Q5VU36 1347 aa24.89■■□□□ 1.58
TRIM47-204ENST00000587339 SPATA31A7Q8IWB4 1347 aa24.89■■□□□ 1.58
TRIM47-204ENST00000587339 TOGARAM1Q9Y4F4 1720 aa24.89■■□□□ 1.58
TRIM47-204ENST00000587339 GNAI3P08754 354 aa24.89■■□□□ 1.58
TRIM47-204ENST00000587339 PDE4AP27815 886 aa24.89■■□□□ 1.58
TRIM47-204ENST00000587339 ANKRD44Q8N8A2 993 aa24.89■■□□□ 1.58
TRIM47-204ENST00000587339 SRCIN1Q9C0H9 1055 aa24.89■■□□□ 1.58
TRIM47-204ENST00000587339 TNS2Q63HR2 1409 aa24.89■■□□□ 1.58
TRIM47-204ENST00000587339 N4BP2Q86UW6 1770 aaPredicted RBP24.89■■□□□ 1.57
TRIM47-204ENST00000587339 ADCY9O60503 1353 aa24.89■■□□□ 1.57
TRIM47-204ENST00000587339 CEP85Q6P2H3 762 aa24.88■■□□□ 1.57
TRIM47-204ENST00000587339 NGLY1Q96IV0 654 aa24.88■■□□□ 1.57
TRIM47-204ENST00000587339 C8orf37Q96NL8 207 aa24.88■■□□□ 1.57
TRIM47-204ENST00000587339 GNAI2P04899 355 aa24.87■■□□□ 1.57
TRIM47-204ENST00000587339 KSR2Q6VAB6 950 aa24.87■■□□□ 1.57
TRIM47-204ENST00000587339 UNC5CLQ8IV45 518 aa24.87■■□□□ 1.57
TRIM47-204ENST00000587339 SPATA31A6Q5VVP1 1343 aa24.87■■□□□ 1.57
TRIM47-204ENST00000587339 PAPPAQ13219 1627 aa24.87■■□□□ 1.57
TRIM47-204ENST00000587339 DDX58O95786 925 aaKnown RBP24.86■■□□□ 1.57
TRIM47-204ENST00000587339 MYL6BP14649 208 aa24.86■■□□□ 1.57
TRIM47-204ENST00000587339 UBR2Q8IWV8 1755 aa24.86■■□□□ 1.57
TRIM47-204ENST00000587339 DDB1Q16531 1140 aa24.86■■□□□ 1.57
TRIM47-204ENST00000587339 BEND3Q5T5X7 828 aa24.86■■□□□ 1.57
TRIM47-204ENST00000587339 BACH2Q9BYV9 841 aa24.86■■□□□ 1.57
TRIM47-204ENST00000587339 MAP3K2Q9Y2U5 619 aa24.86■■□□□ 1.57
TRIM47-204ENST00000587339 GLI3P10071 1580 aa24.86■■□□□ 1.57
TRIM47-204ENST00000587339 KCPQ6ZWJ8 1503 aa24.85■■□□□ 1.57
TRIM47-204ENST00000587339 PTCD1O75127 700 aaKnown RBP24.85■■□□□ 1.57
TRIM47-204ENST00000587339 NUCB1Q02818 461 aa24.85■■□□□ 1.57
TRIM47-204ENST00000587339 AIMP1Q12904 312 aaKnown RBP24.85■■□□□ 1.57
TRIM47-204ENST00000587339 USP44Q9H0E7 712 aa24.85■■□□□ 1.57
TRIM47-204ENST00000587339 BARGINQ6ZT62 677 aa24.84■■□□□ 1.57
TRIM47-204ENST00000587339 PIGBQ92521 554 aa24.84■■□□□ 1.57
TRIM47-204ENST00000587339 LRP6O75581 1613 aa24.83■■□□□ 1.57
TRIM47-204ENST00000587339 LAMB4A4D0S4 1761 aa24.83■■□□□ 1.56
TRIM47-204ENST00000587339 UBTFL1P0CB47 393 aaPredicted RBP24.82■■□□□ 1.56
TRIM47-204ENST00000587339 CHD1LQ86WJ1 897 aa24.82■■□□□ 1.56
TRIM47-204ENST00000587339 DCTPP1Q9H773 170 aa24.82■■□□□ 1.56
TRIM47-204ENST00000587339 HMMRO75330 724 aa24.81■■□□□ 1.56
TRIM47-204ENST00000587339 FAM161AQ3B820 660 aa24.81■■□□□ 1.56
TRIM47-204ENST00000587339 ANKRD45Q5TZF3 282 aa24.81■■□□□ 1.56
TRIM47-204ENST00000587339 COPS6Q7L5N1 327 aa24.81■■□□□ 1.56
TRIM47-204ENST00000587339 BCL9LQ86UU0 1499 aa24.81■■□□□ 1.56
TRIM47-204ENST00000587339 ERBB4Q15303 1308 aa24.81■■□□□ 1.56
TRIM47-204ENST00000587339 LRP10Q7Z4F1 713 aa24.8■■□□□ 1.56
TRIM47-204ENST00000587339 XAGE3Q8WTP9 111 aa24.8■■□□□ 1.56
TRIM47-204ENST00000587339 PIP4K2AP48426 406 aaPredicted RBP24.8■■□□□ 1.56
TRIM47-204ENST00000587339 FNBP4Q8N3X1 1017 aaPredicted RBP24.8■■□□□ 1.56
TRIM47-204ENST00000587339 LNPKQ9C0E8 428 aa24.8■■□□□ 1.56
TRIM47-204ENST00000587339 ASAP1Q9ULH1 1129 aa24.8■■□□□ 1.56
TRIM47-204ENST00000587339 BCL9O00512 1426 aa24.8■■□□□ 1.56
TRIM47-204ENST00000587339 VPS72Q15906 364 aa24.79■■□□□ 1.56
TRIM47-204ENST00000587339 RIC3Q7Z5B4 369 aa24.79■■□□□ 1.56
TRIM47-204ENST00000587339 SYTL4Q96C24 671 aaPredicted RBP24.79■■□□□ 1.56
TRIM47-204ENST00000587339 ALDH1L1O75891 902 aa24.78■■□□□ 1.56
TRIM47-204ENST00000587339 HSPA1LP34931 641 aa24.78■■□□□ 1.56
TRIM47-204ENST00000587339 ATG3Q9NT62 314 aa24.78■■□□□ 1.56
TRIM47-204ENST00000587339 LRRFIP2Q9Y608 721 aaKnown RBP24.78■■□□□ 1.56
TRIM47-204ENST00000587339 ITGB4P16144 1822 aa24.78■■□□□ 1.56
TRIM47-204ENST00000587339 LINS1Q8NG48 757 aa24.77■■□□□ 1.56
TRIM47-204ENST00000587339 C8orf34Q49A92 452 aa24.76■■□□□ 1.55
TRIM47-204ENST00000587339 ANKRD13DQ6ZTN6 518 aa24.76■■□□□ 1.55
TRIM47-204ENST00000587339 NBPF7P0C2Y1 421 aaPredicted RBP24.76■■□□□ 1.55
TRIM47-204ENST00000587339 VSIG10Q8N0Z9 540 aa24.76■■□□□ 1.55
TRIM47-204ENST00000587339 PRIM1P49642 420 aaKnown RBP24.75■■□□□ 1.55
TRIM47-204ENST00000587339 NEXNQ0ZGT2 675 aa24.75■■□□□ 1.55
TRIM47-204ENST00000587339 NBPF26B4DH59 902 aa24.74■■□□□ 1.55
TRIM47-204ENST00000587339 FAM98CQ17RN3 349 aaKnown RBP24.74■■□□□ 1.55
TRIM47-204ENST00000587339 CWF19L2Q2TBE0 894 aaKnown RBP24.74■■□□□ 1.55
TRIM47-204ENST00000587339 NBPF14Q5TI25 921 aa24.74■■□□□ 1.55
TRIM47-204ENST00000587339 NBPF10Q6P3W6 841 aaKnown RBP24.74■■□□□ 1.55
TRIM47-204ENST00000587339 NBPF15Q8N660 670 aa24.74■■□□□ 1.55
TRIM47-204ENST00000587339 MARCH10Q8NA82 808 aaPredicted RBP24.74■■□□□ 1.55
TRIM47-204ENST00000587339 TEX13AQ9BXU3 409 aaPredicted RBP24.74■■□□□ 1.55
TRIM47-204ENST00000587339 C9orf78Q9NZ63 289 aaPredicted RBP24.74■■□□□ 1.55
TRIM47-204ENST00000587339 USP21Q9UK80 565 aa24.74■■□□□ 1.55
TRIM47-204ENST00000587339 ATP8B2P98198 1209 aa24.74■■□□□ 1.55
TRIM47-204ENST00000587339 A1BGP04217 495 aa24.73■■□□□ 1.55
TRIM47-204ENST00000587339 RBM42Q9BTD8 480 aaKnown RBP24.73■■□□□ 1.55
TRIM47-204ENST00000587339 ZBTB47Q9UFB7 747 aaPredicted RBP24.73■■□□□ 1.55
TRIM47-204ENST00000587339 DOT1LQ8TEK3 1739 aa24.73■■□□□ 1.55
TRIM47-204ENST00000587339 MEX3CQ5U5Q3 659 aaKnown RBP24.73■■□□□ 1.55
TRIM47-204ENST00000587339 METTL22Q9BUU2 404 aaPredicted RBP24.73■■□□□ 1.55
TRIM47-204ENST00000587339 PNMA6EA0A0J9YXQ4 647 aa24.72■■□□□ 1.55
TRIM47-204ENST00000587339 HDAC5Q9UQL6 1122 aa24.71■■□□□ 1.55
TRIM47-204ENST00000587339 PLBD2Q8NHP8 589 aa24.71■■□□□ 1.55
TRIM47-204ENST00000587339 IGKV5-2P06315 115 aa24.7■■□□□ 1.54
TRIM47-204ENST00000587339 KAT6BQ8WYB5 2073 aa24.7■■□□□ 1.54
TRIM47-204ENST00000587339 GRM8O00222 908 aa24.69■■□□□ 1.54
TRIM47-204ENST00000587339 STARD3NLO95772 234 aa24.69■■□□□ 1.54
TRIM47-204ENST00000587339 DNAJC10Q8IXB1 793 aa24.69■■□□□ 1.54
TRIM47-204ENST00000587339 MYD88Q99836 296 aa24.69■■□□□ 1.54
TRIM47-204ENST00000587339 IBTKQ9P2D0 1353 aaPredicted RBP24.68■■□□□ 1.54
TRIM47-204ENST00000587339 A0A0G2JS52 829 aa24.68■■□□□ 1.54
TRIM47-204ENST00000587339 NEURL1BA8MQ27 555 aa24.68■■□□□ 1.54
TRIM47-204ENST00000587339 ACSBG1Q96GR2 724 aa24.68■■□□□ 1.54
TRIM47-204ENST00000587339 APBB1O00213 710 aa24.67■■□□□ 1.54
TRIM47-204ENST00000587339 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.67■■□□□ 1.54
TRIM47-204ENST00000587339 MYT1Q01538 1121 aa24.67■■□□□ 1.54
TRIM47-204ENST00000587339 PPP1R42Q7Z4L9 355 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms