RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-210ENST00000587235 ZNF790Q6PG37 636 aa33.79■■■■□ 3
TCF3-210ENST00000587235 ZNF496Q96IT1 587 aaPredicted RBP33.79■■■■□ 3
TCF3-210ENST00000587235 KIAA1551Q9HCM1 1747 aa33.79■■■■□ 3
TCF3-210ENST00000587235 STARD3NLO95772 234 aa33.78■■■■□ 3
TCF3-210ENST00000587235 NARFQ9UHQ1 456 aa33.78■■■■□ 3
TCF3-210ENST00000587235 CANXP27824 592 aaKnown RBP33.77■■■■□ 3
TCF3-210ENST00000587235 COL15A1P39059 1388 aa33.76■■■■□ 3
TCF3-210ENST00000587235 POLRMTO00411 1230 aaKnown RBP33.76■■■□□ 2.99
TCF3-210ENST00000587235 KCNA3P22001 575 aa33.75■■■□□ 2.99
TCF3-210ENST00000587235 UBR2Q8IWV8 1755 aa33.75■■■□□ 2.99
TCF3-210ENST00000587235 ADCY9O60503 1353 aa33.74■■■□□ 2.99
TCF3-210ENST00000587235 CEMIPQ8WUJ3 1361 aa33.74■■■□□ 2.99
TCF3-210ENST00000587235 FCHSD2O94868 740 aa33.74■■■□□ 2.99
TCF3-210ENST00000587235 HEG1Q9ULI3 1381 aa33.73■■■□□ 2.99
TCF3-210ENST00000587235 TEX13AQ9BXU3 409 aaPredicted RBP33.73■■■□□ 2.99
TCF3-210ENST00000587235 BCL2L12Q9HB09 334 aa33.72■■■□□ 2.99
TCF3-210ENST00000587235 GPBP1L1Q9HC44 474 aaPredicted RBP33.72■■■□□ 2.99
TCF3-210ENST00000587235 BTBD11A6QL63 1104 aa33.71■■■□□ 2.99
TCF3-210ENST00000587235 ZEB1P37275 1124 aaPredicted RBP33.71■■■□□ 2.99
TCF3-210ENST00000587235 NFIXQ14938 502 aa33.71■■■□□ 2.99
TCF3-210ENST00000587235 ARHGAP27Q6ZUM4 889 aa33.71■■■□□ 2.99
TCF3-210ENST00000587235 ZNF526Q8TF50 670 aaPredicted RBP33.71■■■□□ 2.99
TCF3-210ENST00000587235 FMNL2Q96PY5 1086 aa33.71■■■□□ 2.99
TCF3-210ENST00000587235 PIM2Q9P1W9 311 aa33.71■■■□□ 2.99
TCF3-210ENST00000587235 EIF5P55010 431 aaKnown RBP33.7■■■□□ 2.99
TCF3-210ENST00000587235 KCNQ3O43525 872 aa33.69■■■□□ 2.98
TCF3-210ENST00000587235 SIPA1L3O60292 1781 aaPredicted RBP33.69■■■□□ 2.98
TCF3-210ENST00000587235 SENP3-EIF4A1A0A087X0R7 540 aa33.68■■■□□ 2.98
TCF3-210ENST00000587235 RTF1Q92541 710 aaKnown RBP33.68■■■□□ 2.98
TCF3-210ENST00000587235 A0A087WZG4 1122 aa33.67■■■□□ 2.98
TCF3-210ENST00000587235 CHRNA5P30532 468 aa33.67■■■□□ 2.98
TCF3-210ENST00000587235 MCM10Q7L590 875 aa33.66■■■□□ 2.98
TCF3-210ENST00000587235 DALRD3Q5D0E6 543 aaKnown RBP33.65■■■□□ 2.98
TCF3-210ENST00000587235 SERPINB2P05120 415 aa33.64■■■□□ 2.98
TCF3-210ENST00000587235 BRCA1P38398 1863 aaKnown RBP33.63■■■□□ 2.97
TCF3-210ENST00000587235 A1BGP04217 495 aa33.63■■■□□ 2.97
TCF3-210ENST00000587235 ZNF330Q9Y3S2 320 aaPredicted RBP33.63■■■□□ 2.97
TCF3-210ENST00000587235 DCTN1Q14203 1278 aa33.62■■■□□ 2.97
TCF3-210ENST00000587235 HTATSF1O43719 755 aaKnown RBP33.61■■■□□ 2.97
TCF3-210ENST00000587235 IL6STP40189 918 aaPredicted RBP33.61■■■□□ 2.97
TCF3-210ENST00000587235 BICDL1Q6ZP65 573 aa33.61■■■□□ 2.97
TCF3-210ENST00000587235 TBC1D2BQ9UPU7 963 aa33.61■■■□□ 2.97
TCF3-210ENST00000587235 RALBP1Q15311 655 aa33.59■■■□□ 2.97
TCF3-210ENST00000587235 USP16Q9Y5T5 823 aa33.59■■■□□ 2.97
TCF3-210ENST00000587235 DDX10Q13206 875 aaKnown RBP33.58■■■□□ 2.97
TCF3-210ENST00000587235 AFDNP55196 1824 aaKnown RBP33.58■■■□□ 2.97
TCF3-210ENST00000587235 TBC1D9BQ66K14 1250 aa33.57■■■□□ 2.96
TCF3-210ENST00000587235 NPM2Q86SE8 214 aaKnown RBP33.57■■■□□ 2.96
TCF3-210ENST00000587235 NEFMP07197 916 aa33.55■■■□□ 2.96
TCF3-210ENST00000587235 ARFGEF1Q9Y6D6 1849 aa33.55■■■□□ 2.96
TCF3-210ENST00000587235 PRAMEF22A3QJZ6 481 aa33.54■■■□□ 2.96
TCF3-210ENST00000587235 SNRPA1P09661 255 aaKnown RBP33.54■■■□□ 2.96
TCF3-210ENST00000587235 NRXN2Q9P2S2 1712 aa33.53■■■□□ 2.96
TCF3-210ENST00000587235 TAF7Q15545 349 aaPredicted RBP33.53■■■□□ 2.96
TCF3-210ENST00000587235 C9orf131Q5VYM1 1079 aa33.53■■■□□ 2.96
TCF3-210ENST00000587235 CAMTA2O94983 1202 aa33.51■■■□□ 2.95
TCF3-210ENST00000587235 PIP4K2AP48426 406 aaPredicted RBP33.51■■■□□ 2.95
TCF3-210ENST00000587235 KIF3CO14782 793 aa33.5■■■□□ 2.95
TCF3-210ENST00000587235 C2CD5Q86YS7 1000 aa33.5■■■□□ 2.95
TCF3-210ENST00000587235 PLEKHF1Q96S99 279 aa33.5■■■□□ 2.95
TCF3-210ENST00000587235 DZIP3Q86Y13 1208 aaKnown RBP33.49■■■□□ 2.95
TCF3-210ENST00000587235 MIS18AQ9NYP9 233 aa33.49■■■□□ 2.95
TCF3-210ENST00000587235 CARMIL3Q8ND23 1372 aa33.48■■■□□ 2.95
TCF3-210ENST00000587235 H0YIN7 160 aa33.48■■■□□ 2.95
TCF3-210ENST00000587235 TTLL6Q8N841 843 aa33.47■■■□□ 2.95
TCF3-210ENST00000587235 SETDB2Q96T68 719 aa33.47■■■□□ 2.95
TCF3-210ENST00000587235 PRR5LQ6MZQ0 368 aa33.45■■■□□ 2.95
TCF3-210ENST00000587235 CCDC24Q8N4L8 307 aa33.45■■■□□ 2.95
TCF3-210ENST00000587235 PNNQ9H307 717 aaKnown RBP33.45■■■□□ 2.95
TCF3-210ENST00000587235 RNF181Q9P0P0 153 aa33.45■■■□□ 2.95
TCF3-210ENST00000587235 NFE2L2Q16236 605 aa33.44■■■□□ 2.94
TCF3-210ENST00000587235 BRIP1Q9BX63 1249 aa33.44■■■□□ 2.94
TCF3-210ENST00000587235 SCN7AQ01118 1682 aa33.44■■■□□ 2.94
TCF3-210ENST00000587235 DLG5Q8TDM6 1919 aa33.42■■■□□ 2.94
TCF3-210ENST00000587235 NBPF26B4DH59 902 aa33.42■■■□□ 2.94
TCF3-210ENST00000587235 PDE6BP35913 854 aa33.42■■■□□ 2.94
TCF3-210ENST00000587235 NBPF10Q6P3W6 841 aaKnown RBP33.42■■■□□ 2.94
TCF3-210ENST00000587235 NBPF15Q8N660 670 aa33.42■■■□□ 2.94
TCF3-210ENST00000587235 PNISRQ8TF01 805 aaKnown RBP33.42■■■□□ 2.94
TCF3-210ENST00000587235 MAPK8IP3Q9UPT6 1336 aa33.4■■■□□ 2.94
TCF3-210ENST00000587235 CLEC4GQ6UXB4 293 aa33.4■■■□□ 2.94
TCF3-210ENST00000587235 NMRK2Q9NPI5 230 aa33.4■■■□□ 2.94
TCF3-210ENST00000587235 PDZRN3Q9UPQ7 1066 aa33.4■■■□□ 2.94
TCF3-210ENST00000587235 MYBBP1AQ9BQG0 1328 aaKnown RBP33.39■■■□□ 2.94
TCF3-210ENST00000587235 NPHP1O15259 732 aa33.39■■■□□ 2.94
TCF3-210ENST00000587235 CNBD1Q8NA66 436 aa33.39■■■□□ 2.94
TCF3-210ENST00000587235 ZNF622Q969S3 477 aaKnown RBP eCLIP33.39■■■□□ 2.94
TCF3-210ENST00000587235 THUMPD2Q9BTF0 503 aaKnown RBP33.39■■■□□ 2.94
TCF3-210ENST00000587235 RASSF7Q02833 373 aa33.38■■■□□ 2.93
TCF3-210ENST00000587235 DLEC1Q9Y238 1755 aa33.37■■■□□ 2.93
TCF3-210ENST00000587235 HSPA6P17066 643 aa33.37■■■□□ 2.93
TCF3-210ENST00000587235 ZNF652Q9Y2D9 606 aa33.36■■■□□ 2.93
TCF3-210ENST00000587235 SBF1O95248 1867 aa33.35■■■□□ 2.93
TCF3-210ENST00000587235 ST5P78524 1137 aa33.35■■■□□ 2.93
TCF3-210ENST00000587235 ANKRD31Q8N7Z5 1873 aa33.35■■■□□ 2.93
TCF3-210ENST00000587235 TOMM70O94826 608 aa33.34■■■□□ 2.93
TCF3-210ENST00000587235 EIF4A1P60842 406 aaKnown RBP33.34■■■□□ 2.93
TCF3-210ENST00000587235 BCORQ6W2J9 1755 aa33.33■■■□□ 2.93
TCF3-210ENST00000587235 LMNB1P20700 586 aa33.32■■■□□ 2.92
TCF3-210ENST00000587235 NBPF5PQ86XG9 351 aaPredicted RBP33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms