RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 TM4SF1P30408 202 aa18.87■□□□□ 0.61
ATG4D-206ENST00000586863 VSIG10Q8N0Z9 540 aa18.87■□□□□ 0.61
ATG4D-206ENST00000586863 NRXN2Q9P2S2 1712 aa18.86■□□□□ 0.61
ATG4D-206ENST00000586863 ARHGAP27Q6ZUM4 889 aa18.86■□□□□ 0.61
ATG4D-206ENST00000586863 IL17REQ8NFR9 667 aa18.86■□□□□ 0.61
ATG4D-206ENST00000586863 CHRNA5P30532 468 aa18.85■□□□□ 0.61
ATG4D-206ENST00000586863 GAS2L2Q8NHY3 880 aa18.85■□□□□ 0.61
ATG4D-206ENST00000586863 BCL2L12Q9HB09 334 aa18.85■□□□□ 0.61
ATG4D-206ENST00000586863 NARFQ9UHQ1 456 aa18.85■□□□□ 0.61
ATG4D-206ENST00000586863 GNAT3A8MTJ3 354 aa18.84■□□□□ 0.61
ATG4D-206ENST00000586863 KIF3CO14782 793 aa18.84■□□□□ 0.61
ATG4D-206ENST00000586863 NFIXQ14938 502 aa18.84■□□□□ 0.61
ATG4D-206ENST00000586863 TTC5Q8N0Z6 440 aa18.84■□□□□ 0.61
ATG4D-206ENST00000586863 PIM2Q9P1W9 311 aa18.84■□□□□ 0.61
ATG4D-206ENST00000586863 CANXP27824 592 aaKnown RBP18.83■□□□□ 0.6
ATG4D-206ENST00000586863 DALRD3Q5D0E6 543 aaKnown RBP18.83■□□□□ 0.6
ATG4D-206ENST00000586863 ZNF496Q96IT1 587 aaPredicted RBP18.83■□□□□ 0.6
ATG4D-206ENST00000586863 DLEC1Q9Y238 1755 aa18.83■□□□□ 0.6
ATG4D-206ENST00000586863 SBF1O95248 1867 aa18.82■□□□□ 0.6
ATG4D-206ENST00000586863 PRKAR2BP31323 418 aa18.82■□□□□ 0.6
ATG4D-206ENST00000586863 TEFQ10587 303 aa18.82■□□□□ 0.6
ATG4D-206ENST00000586863 PHACTR3Q96KR7 559 aa18.82■□□□□ 0.6
ATG4D-206ENST00000586863 RSPH6AQ9H0K4 717 aa18.82■□□□□ 0.6
ATG4D-206ENST00000586863 SCN7AQ01118 1682 aa18.82■□□□□ 0.6
ATG4D-206ENST00000586863 CEMIPQ8WUJ3 1361 aa18.81■□□□□ 0.6
ATG4D-206ENST00000586863 HEG1Q9ULI3 1381 aa18.81■□□□□ 0.6
ATG4D-206ENST00000586863 ZNF790Q6PG37 636 aa18.81■□□□□ 0.6
ATG4D-206ENST00000586863 STARD3NLO95772 234 aa18.8■□□□□ 0.6
ATG4D-206ENST00000586863 EIF5P55010 431 aaKnown RBP18.8■□□□□ 0.6
ATG4D-206ENST00000586863 CFAP53Q96M91 514 aa18.8■□□□□ 0.6
ATG4D-206ENST00000586863 HSPA6P17066 643 aa18.79■□□□□ 0.6
ATG4D-206ENST00000586863 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
ATG4D-206ENST00000586863 CARMIL3Q8ND23 1372 aa18.79■□□□□ 0.6
ATG4D-206ENST00000586863 ANKRD31Q8N7Z5 1873 aa18.78■□□□□ 0.6
ATG4D-206ENST00000586863 SERPINB2P05120 415 aa18.78■□□□□ 0.6
ATG4D-206ENST00000586863 PPP2R1AP30153 589 aa18.78■□□□□ 0.6
ATG4D-206ENST00000586863 KCNQ3O43525 872 aa18.77■□□□□ 0.6
ATG4D-206ENST00000586863 NMRK2Q9NPI5 230 aa18.77■□□□□ 0.6
ATG4D-206ENST00000586863 BICDL1Q6ZP65 573 aa18.76■□□□□ 0.59
ATG4D-206ENST00000586863 FMNL2Q96PY5 1086 aa18.76■□□□□ 0.59
ATG4D-206ENST00000586863 BCORQ6W2J9 1755 aa18.76■□□□□ 0.59
ATG4D-206ENST00000586863 A0A087WZG4 1122 aa18.75■□□□□ 0.59
ATG4D-206ENST00000586863 BTBD11A6QL63 1104 aa18.75■□□□□ 0.59
ATG4D-206ENST00000586863 U2AF1L5P0DN76 240 aaPredicted RBP18.75■□□□□ 0.59
ATG4D-206ENST00000586863 U2AF1Q01081 240 aaKnown RBP eCLIP18.75■□□□□ 0.59
ATG4D-206ENST00000586863 TEX13AQ9BXU3 409 aaPredicted RBP18.75■□□□□ 0.59
ATG4D-206ENST00000586863 RNF181Q9P0P0 153 aa18.75■□□□□ 0.59
ATG4D-206ENST00000586863 NUDCQ9Y266 331 aa18.75■□□□□ 0.59
ATG4D-206ENST00000586863 ZNF330Q9Y3S2 320 aaPredicted RBP18.75■□□□□ 0.59
ATG4D-206ENST00000586863 COL11A2P13942 1736 aaPredicted RBP18.74■□□□□ 0.59
ATG4D-206ENST00000586863 A1BGP04217 495 aa18.74■□□□□ 0.59
ATG4D-206ENST00000586863 TBC1D9BQ66K14 1250 aa18.74■□□□□ 0.59
ATG4D-206ENST00000586863 TBC1D2BQ9UPU7 963 aa18.74■□□□□ 0.59
ATG4D-206ENST00000586863 CCDC88AQ3V6T2 1871 aa18.73■□□□□ 0.59
ATG4D-206ENST00000586863 IL6STP40189 918 aaPredicted RBP18.73■□□□□ 0.59
ATG4D-206ENST00000586863 RASSF7Q02833 373 aa18.73■□□□□ 0.59
ATG4D-206ENST00000586863 MCM10Q7L590 875 aa18.72■□□□□ 0.59
ATG4D-206ENST00000586863 C2CD5Q86YS7 1000 aa18.72■□□□□ 0.59
ATG4D-206ENST00000586863 DLG5Q8TDM6 1919 aa18.71■□□□□ 0.59
ATG4D-206ENST00000586863 TOMM70O94826 608 aa18.71■□□□□ 0.59
ATG4D-206ENST00000586863 TNRC6CQ9HCJ0 1690 aaKnown RBP18.7■□□□□ 0.58
ATG4D-206ENST00000586863 PRAMEF22A3QJZ6 481 aa18.7■□□□□ 0.58
ATG4D-206ENST00000586863 CAMTA2O94983 1202 aa18.7■□□□□ 0.58
ATG4D-206ENST00000586863 PIP4K2AP48426 406 aaPredicted RBP18.7■□□□□ 0.58
ATG4D-206ENST00000586863 DCTN1Q14203 1278 aa18.7■□□□□ 0.58
ATG4D-206ENST00000586863 CCDC24Q8N4L8 307 aa18.7■□□□□ 0.58
ATG4D-206ENST00000586863 TTLL6Q8N841 843 aa18.7■□□□□ 0.58
ATG4D-206ENST00000586863 USP16Q9Y5T5 823 aa18.7■□□□□ 0.58
ATG4D-206ENST00000586863 TIAM2Q8IVF5 1701 aa18.69■□□□□ 0.58
ATG4D-206ENST00000586863 H0YIN7 160 aa18.69■□□□□ 0.58
ATG4D-206ENST00000586863 PRELPP51888 382 aa18.69■□□□□ 0.58
ATG4D-206ENST00000586863 PRR5LQ6MZQ0 368 aa18.69■□□□□ 0.58
ATG4D-206ENST00000586863 RTF1Q92541 710 aaKnown RBP18.69■□□□□ 0.58
ATG4D-206ENST00000586863 CACNA1SQ13698 1873 aa18.69■□□□□ 0.58
ATG4D-206ENST00000586863 KDM2BQ8NHM5 1336 aa18.67■□□□□ 0.58
ATG4D-206ENST00000586863 FER1L6Q2WGJ9 1857 aa18.67■□□□□ 0.58
ATG4D-206ENST00000586863 LAMB4A4D0S4 1761 aa18.66■□□□□ 0.58
ATG4D-206ENST00000586863 NFKBIEO00221 500 aa18.66■□□□□ 0.58
ATG4D-206ENST00000586863 NPM2Q86SE8 214 aaKnown RBP18.66■□□□□ 0.58
ATG4D-206ENST00000586863 DZIP3Q86Y13 1208 aaKnown RBP18.66■□□□□ 0.58
ATG4D-206ENST00000586863 BRIP1Q9BX63 1249 aa18.66■□□□□ 0.58
ATG4D-206ENST00000586863 SNRPA1P09661 255 aaKnown RBP18.65■□□□□ 0.58
ATG4D-206ENST00000586863 LMNB1P20700 586 aa18.65■□□□□ 0.58
ATG4D-206ENST00000586863 RBM46Q8TBY0 533 aaKnown RBP18.65■□□□□ 0.58
ATG4D-206ENST00000586863 SETDB2Q96T68 719 aa18.65■□□□□ 0.58
ATG4D-206ENST00000586863 ZC3H4Q9UPT8 1303 aaKnown RBP18.65■□□□□ 0.58
ATG4D-206ENST00000586863 WDR90Q96KV7 1748 aa18.65■□□□□ 0.58
ATG4D-206ENST00000586863 PCNTO95613 3336 aa18.65■□□□□ 0.58
ATG4D-206ENST00000586863 KDM3BQ7LBC6 1761 aa18.65■□□□□ 0.58
ATG4D-206ENST00000586863 SLX4Q8IY92 1834 aa18.65■□□□□ 0.58
ATG4D-206ENST00000586863 DICER1Q9UPY3 1922 aaKnown RBP18.64■□□□□ 0.58
ATG4D-206ENST00000586863 ARFGEF2Q9Y6D5 1785 aa18.64■□□□□ 0.57
ATG4D-206ENST00000586863 HTATSF1O43719 755 aaKnown RBP18.64■□□□□ 0.57
ATG4D-206ENST00000586863 PDE6BP35913 854 aa18.64■□□□□ 0.57
ATG4D-206ENST00000586863 APLP1P51693 650 aa18.64■□□□□ 0.57
ATG4D-206ENST00000586863 C16orf71Q8IYS4 520 aaPredicted RBP18.64■□□□□ 0.57
ATG4D-206ENST00000586863 CNBD1Q8NA66 436 aa18.64■□□□□ 0.57
ATG4D-206ENST00000586863 ZNF622Q969S3 477 aaKnown RBP eCLIP18.64■□□□□ 0.57
ATG4D-206ENST00000586863 RRAGCQ9HB90 399 aa18.64■□□□□ 0.57
ATG4D-206ENST00000586863 NBPF26B4DH59 902 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms