RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 SRP68Q9UHB9 627 aaKnown RBP27.27■■□□□ 1.96
CIRBP-209ENST00000586555 USP42Q9H9J4 1324 aaKnown RBP27.26■■□□□ 1.95
CIRBP-209ENST00000586555 GIGYF1O75420 1035 aaPredicted RBP27.26■■□□□ 1.95
CIRBP-209ENST00000586555 WDR43Q15061 677 aaKnown RBP eCLIP27.26■■□□□ 1.95
CIRBP-209ENST00000586555 MCM10Q7L590 875 aa27.26■■□□□ 1.95
CIRBP-209ENST00000586555 CCDC87Q9NVE4 849 aa27.26■■□□□ 1.95
CIRBP-209ENST00000586555 PARP3Q9Y6F1 533 aa27.26■■□□□ 1.95
CIRBP-209ENST00000586555 ATP10DQ9P241 1426 aa27.25■■□□□ 1.95
CIRBP-209ENST00000586555 CYP19A1P11511 503 aaPredicted RBP27.25■■□□□ 1.95
CIRBP-209ENST00000586555 KCPQ6ZWJ8 1503 aa27.25■■□□□ 1.95
CIRBP-209ENST00000586555 FKBP8Q14318 412 aa27.24■■□□□ 1.95
CIRBP-209ENST00000586555 NFE2L2Q16236 605 aa27.24■■□□□ 1.95
CIRBP-209ENST00000586555 TEX13AQ9BXU3 409 aaPredicted RBP27.24■■□□□ 1.95
CIRBP-209ENST00000586555 SIPA1L3O60292 1781 aaPredicted RBP27.23■■□□□ 1.95
CIRBP-209ENST00000586555 A0A0G2JLW4 131 aa27.23■■□□□ 1.95
CIRBP-209ENST00000586555 FMNL2Q96PY5 1086 aa27.23■■□□□ 1.95
CIRBP-209ENST00000586555 STARD3NLO95772 234 aa27.22■■□□□ 1.95
CIRBP-209ENST00000586555 UBR2Q8IWV8 1755 aa27.22■■□□□ 1.95
CIRBP-209ENST00000586555 BRCA1P38398 1863 aaKnown RBP27.21■■□□□ 1.95
CIRBP-209ENST00000586555 SOS1Q07889 1333 aaPredicted RBP27.21■■□□□ 1.95
CIRBP-209ENST00000586555 DPEP1P16444 411 aa27.2■■□□□ 1.94
CIRBP-209ENST00000586555 TM4SF1P30408 202 aa27.2■■□□□ 1.94
CIRBP-209ENST00000586555 DDR1Q08345 913 aa27.2■■□□□ 1.94
CIRBP-209ENST00000586555 DCTN1Q14203 1278 aa27.2■■□□□ 1.94
CIRBP-209ENST00000586555 TAF7Q15545 349 aaPredicted RBP27.2■■□□□ 1.94
CIRBP-209ENST00000586555 ZNF496Q96IT1 587 aaPredicted RBP27.2■■□□□ 1.94
CIRBP-209ENST00000586555 HEG1Q9ULI3 1381 aa27.2■■□□□ 1.94
CIRBP-209ENST00000586555 KCNA3P22001 575 aa27.19■■□□□ 1.94
CIRBP-209ENST00000586555 PNISRQ8TF01 805 aaKnown RBP27.18■■□□□ 1.94
CIRBP-209ENST00000586555 USPL1Q5W0Q7 1092 aa27.17■■□□□ 1.94
CIRBP-209ENST00000586555 BCS1LQ9Y276 419 aa27.17■■□□□ 1.94
CIRBP-209ENST00000586555 SENP3-EIF4A1A0A087X0R7 540 aa27.16■■□□□ 1.94
CIRBP-209ENST00000586555 POLRMTO00411 1230 aaKnown RBP27.16■■□□□ 1.94
CIRBP-209ENST00000586555 ZPR1O75312 459 aa27.16■■□□□ 1.94
CIRBP-209ENST00000586555 NARFQ9UHQ1 456 aa27.16■■□□□ 1.94
CIRBP-209ENST00000586555 ZBTB1Q9Y2K1 713 aa27.16■■□□□ 1.94
CIRBP-209ENST00000586555 RIPK4P57078 832 aa27.15■■□□□ 1.94
CIRBP-209ENST00000586555 LMOD3Q0VAK6 560 aa27.15■■□□□ 1.94
CIRBP-209ENST00000586555 GPBP1L1Q9HC44 474 aaPredicted RBP27.15■■□□□ 1.94
CIRBP-209ENST00000586555 DLG5Q8TDM6 1919 aa27.15■■□□□ 1.94
CIRBP-209ENST00000586555 RUNDC1Q96C34 613 aa27.14■■□□□ 1.94
CIRBP-209ENST00000586555 ARFGEF1Q9Y6D6 1849 aa27.13■■□□□ 1.93
CIRBP-209ENST00000586555 COL15A1P39059 1388 aa27.13■■□□□ 1.93
CIRBP-209ENST00000586555 ANP32CO43423 234 aa27.13■■□□□ 1.93
CIRBP-209ENST00000586555 KCNQ3O43525 872 aa27.12■■□□□ 1.93
CIRBP-209ENST00000586555 CANXP27824 592 aaKnown RBP27.12■■□□□ 1.93
CIRBP-209ENST00000586555 NPM2Q86SE8 214 aaKnown RBP27.12■■□□□ 1.93
CIRBP-209ENST00000586555 BCL2L12Q9HB09 334 aa27.12■■□□□ 1.93
CIRBP-209ENST00000586555 ADAMTS8Q9UP79 889 aa27.12■■□□□ 1.93
CIRBP-209ENST00000586555 SNRPA1P09661 255 aaKnown RBP27.11■■□□□ 1.93
CIRBP-209ENST00000586555 TMPOP42166 694 aaKnown RBP27.11■■□□□ 1.93
CIRBP-209ENST00000586555 PIM2Q9P1W9 311 aa27.11■■□□□ 1.93
CIRBP-209ENST00000586555 AFDNP55196 1824 aaKnown RBP27.11■■□□□ 1.93
CIRBP-209ENST00000586555 A0A087WZG4 1122 aa27.1■■□□□ 1.93
CIRBP-209ENST00000586555 EIF5P55010 431 aaKnown RBP27.1■■□□□ 1.93
CIRBP-209ENST00000586555 CCDC146Q8IYE0 955 aa27.1■■□□□ 1.93
CIRBP-209ENST00000586555 NFIXQ14938 502 aa27.09■■□□□ 1.93
CIRBP-209ENST00000586555 NRXN2Q9P2S2 1712 aa27.09■■□□□ 1.93
CIRBP-209ENST00000586555 ARHGAP27Q6ZUM4 889 aa27.08■■□□□ 1.93
CIRBP-209ENST00000586555 ZNF526Q8TF50 670 aaPredicted RBP27.08■■□□□ 1.93
CIRBP-209ENST00000586555 MIS18AQ9NYP9 233 aa27.07■■□□□ 1.92
CIRBP-209ENST00000586555 NEUROD2Q15784 382 aa27.06■■□□□ 1.92
CIRBP-209ENST00000586555 THUMPD2Q9BTF0 503 aaKnown RBP27.06■■□□□ 1.92
CIRBP-209ENST00000586555 CHRNA5P30532 468 aa27.05■■□□□ 1.92
CIRBP-209ENST00000586555 IL6STP40189 918 aaPredicted RBP27.05■■□□□ 1.92
CIRBP-209ENST00000586555 DALRD3Q5D0E6 543 aaKnown RBP27.05■■□□□ 1.92
CIRBP-209ENST00000586555 ZNF330Q9Y3S2 320 aaPredicted RBP27.04■■□□□ 1.92
CIRBP-209ENST00000586555 USP16Q9Y5T5 823 aa27.04■■□□□ 1.92
CIRBP-209ENST00000586555 KIF3CO14782 793 aa27.03■■□□□ 1.92
CIRBP-209ENST00000586555 A1BGP04217 495 aa27.03■■□□□ 1.92
CIRBP-209ENST00000586555 BABAM1Q9NWV8 329 aa27.03■■□□□ 1.92
CIRBP-209ENST00000586555 RRP7AQ9Y3A4 280 aaKnown RBP27.03■■□□□ 1.92
CIRBP-209ENST00000586555 SERPINB2P05120 415 aa27.02■■□□□ 1.92
CIRBP-209ENST00000586555 TSPYL4Q9UJ04 414 aa27.01■■□□□ 1.91
CIRBP-209ENST00000586555 CEP350Q5VT06 3117 aa27■■□□□ 1.91
CIRBP-209ENST00000586555 SBF1O95248 1867 aa27■■□□□ 1.91
CIRBP-209ENST00000586555 EIF4A1P60842 406 aaKnown RBP26.99■■□□□ 1.91
CIRBP-209ENST00000586555 KDM3BQ7LBC6 1761 aa26.99■■□□□ 1.91
CIRBP-209ENST00000586555 PRAMEF22A3QJZ6 481 aa26.98■■□□□ 1.91
CIRBP-209ENST00000586555 DLEC1Q9Y238 1755 aa26.97■■□□□ 1.91
CIRBP-209ENST00000586555 C9orf131Q5VYM1 1079 aa26.97■■□□□ 1.91
CIRBP-209ENST00000586555 TBC1D9BQ66K14 1250 aa26.96■■□□□ 1.91
CIRBP-209ENST00000586555 MRS2Q9HD23 443 aa26.96■■□□□ 1.91
CIRBP-209ENST00000586555 TBC1D2BQ9UPU7 963 aa26.96■■□□□ 1.91
CIRBP-209ENST00000586555 TRIM35Q9UPQ4 493 aa26.95■■□□□ 1.9
CIRBP-209ENST00000586555 SCN7AQ01118 1682 aa26.95■■□□□ 1.9
CIRBP-209ENST00000586555 APAF1O14727 1248 aa26.94■■□□□ 1.9
CIRBP-209ENST00000586555 DZIP3Q86Y13 1208 aaKnown RBP26.94■■□□□ 1.9
CIRBP-209ENST00000586555 CARMIL3Q8ND23 1372 aa26.94■■□□□ 1.9
CIRBP-209ENST00000586555 HSPA6P17066 643 aa26.93■■□□□ 1.9
CIRBP-209ENST00000586555 CCDC184Q52MB2 194 aa26.93■■□□□ 1.9
CIRBP-209ENST00000586555 BICDL1Q6ZP65 573 aa26.93■■□□□ 1.9
CIRBP-209ENST00000586555 CAMTA2O94983 1202 aa26.92■■□□□ 1.9
CIRBP-209ENST00000586555 CALD1Q05682 793 aaKnown RBP26.92■■□□□ 1.9
CIRBP-209ENST00000586555 LAS1LQ9Y4W2 734 aaKnown RBP26.92■■□□□ 1.9
CIRBP-209ENST00000586555 ANKRD31Q8N7Z5 1873 aa26.91■■□□□ 1.9
CIRBP-209ENST00000586555 PIP4K2AP48426 406 aaPredicted RBP26.91■■□□□ 1.9
CIRBP-209ENST00000586555 C2CD5Q86YS7 1000 aa26.91■■□□□ 1.9
CIRBP-209ENST00000586555 LAMB4A4D0S4 1761 aa26.91■■□□□ 1.9
CIRBP-209ENST00000586555 TTLL6Q8N841 843 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms