RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 ZPR1O75312 459 aa20.46■□□□□ 0.87
SF3A2-202ENST00000586396 ZC3H4Q9UPT8 1303 aaKnown RBP20.46■□□□□ 0.87
SF3A2-202ENST00000586396 RASSF7Q02833 373 aa20.45■□□□□ 0.86
SF3A2-202ENST00000586396 SULT6B1Q6IMI4 303 aa20.45■□□□□ 0.86
SF3A2-202ENST00000586396 SMC1BQ8NDV3 1235 aa20.45■□□□□ 0.86
SF3A2-202ENST00000586396 AMER1Q5JTC6 1135 aaPredicted RBP20.44■□□□□ 0.86
SF3A2-202ENST00000586396 COL13A1Q5TAT6 717 aaPredicted RBP20.44■□□□□ 0.86
SF3A2-202ENST00000586396 USPL1Q5W0Q7 1092 aa20.44■□□□□ 0.86
SF3A2-202ENST00000586396 INTS5Q6P9B9 1019 aaKnown RBP20.44■□□□□ 0.86
SF3A2-202ENST00000586396 COL15A1P39059 1388 aa20.44■□□□□ 0.86
SF3A2-202ENST00000586396 NPC1L1Q9UHC9 1359 aa20.44■□□□□ 0.86
SF3A2-202ENST00000586396 PER1O15534 1290 aaPredicted RBP20.43■□□□□ 0.86
SF3A2-202ENST00000586396 MORC1Q86VD1 984 aa20.43■□□□□ 0.86
SF3A2-202ENST00000586396 SOS1Q07889 1333 aaPredicted RBP20.43■□□□□ 0.86
SF3A2-202ENST00000586396 TM4SF1P30408 202 aa20.42■□□□□ 0.86
SF3A2-202ENST00000586396 DNAJC10Q8IXB1 793 aa20.42■□□□□ 0.86
SF3A2-202ENST00000586396 UBR2Q8IWV8 1755 aa20.41■□□□□ 0.86
SF3A2-202ENST00000586396 CAPN15O75808 1086 aa20.4■□□□□ 0.86
SF3A2-202ENST00000586396 LMNB1P20700 586 aa20.4■□□□□ 0.86
SF3A2-202ENST00000586396 AKAP4Q5JQC9 854 aa20.4■□□□□ 0.86
SF3A2-202ENST00000586396 SLC52A2Q9HAB3 445 aa20.4■□□□□ 0.86
SF3A2-202ENST00000586396 SCN7AQ01118 1682 aa20.39■□□□□ 0.86
SF3A2-202ENST00000586396 NFIXQ14938 502 aa20.38■□□□□ 0.85
SF3A2-202ENST00000586396 TNS4Q8IZW8 715 aa20.38■□□□□ 0.85
SF3A2-202ENST00000586396 NARFQ9UHQ1 456 aa20.38■□□□□ 0.85
SF3A2-202ENST00000586396 KNSTRNQ9Y448 316 aa20.38■□□□□ 0.85
SF3A2-202ENST00000586396 COL11A2P13942 1736 aaPredicted RBP20.38■□□□□ 0.85
SF3A2-202ENST00000586396 DICER1Q9UPY3 1922 aaKnown RBP20.37■□□□□ 0.85
SF3A2-202ENST00000586396 ANKRD31Q8N7Z5 1873 aa20.37■□□□□ 0.85
SF3A2-202ENST00000586396 GLTPD2A6NH11 291 aa20.37■□□□□ 0.85
SF3A2-202ENST00000586396 CYP19A1P11511 503 aaPredicted RBP20.37■□□□□ 0.85
SF3A2-202ENST00000586396 ZBTB1Q9Y2K1 713 aa20.37■□□□□ 0.85
SF3A2-202ENST00000586396 CACNA1SQ13698 1873 aa20.37■□□□□ 0.85
SF3A2-202ENST00000586396 CARMIL3Q8ND23 1372 aa20.36■□□□□ 0.85
SF3A2-202ENST00000586396 VEGFAP15692 232 aaPredicted RBP20.36■□□□□ 0.85
SF3A2-202ENST00000586396 IL13P35225 146 aa20.36■□□□□ 0.85
SF3A2-202ENST00000586396 SLC39A6Q13433 755 aa20.36■□□□□ 0.85
SF3A2-202ENST00000586396 TTLL6Q8N841 843 aa20.36■□□□□ 0.85
SF3A2-202ENST00000586396 LGR6Q9HBX8 967 aa20.35■□□□□ 0.85
SF3A2-202ENST00000586396 FER1L6Q2WGJ9 1857 aa20.35■□□□□ 0.85
SF3A2-202ENST00000586396 SERPINB2P05120 415 aa20.34■□□□□ 0.85
SF3A2-202ENST00000586396 PRELPP51888 382 aa20.34■□□□□ 0.85
SF3A2-202ENST00000586396 C2CD5Q86YS7 1000 aa20.34■□□□□ 0.85
SF3A2-202ENST00000586396 RNMTO43148 476 aaKnown RBP20.33■□□□□ 0.85
SF3A2-202ENST00000586396 H0YIN7 160 aa20.32■□□□□ 0.84
SF3A2-202ENST00000586396 NFKBIEO00221 500 aa20.32■□□□□ 0.84
SF3A2-202ENST00000586396 HSPA1AP0DMV8 641 aaKnown RBP20.32■□□□□ 0.84
SF3A2-202ENST00000586396 HSPA1BP0DMV9 641 aaKnown RBP20.32■□□□□ 0.84
SF3A2-202ENST00000586396 BCL2L12Q9HB09 334 aa20.32■□□□□ 0.84
SF3A2-202ENST00000586396 HMOX1P09601 288 aa20.3■□□□□ 0.84
SF3A2-202ENST00000586396 CANXP27824 592 aaKnown RBP20.3■□□□□ 0.84
SF3A2-202ENST00000586396 BICDL1Q6ZP65 573 aa20.3■□□□□ 0.84
SF3A2-202ENST00000586396 VSIG10Q8N0Z9 540 aa20.3■□□□□ 0.84
SF3A2-202ENST00000586396 ARFGEF2Q9Y6D5 1785 aa20.3■□□□□ 0.84
SF3A2-202ENST00000586396 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
SF3A2-202ENST00000586396 DPY19L2Q6NUT2 758 aa20.28■□□□□ 0.84
SF3A2-202ENST00000586396 TTC5Q8N0Z6 440 aa20.28■□□□□ 0.84
SF3A2-202ENST00000586396 COL3A1P02461 1466 aaPredicted RBP20.28■□□□□ 0.84
SF3A2-202ENST00000586396 BCORQ6W2J9 1755 aa20.28■□□□□ 0.84
SF3A2-202ENST00000586396 ZNF622Q969S3 477 aaKnown RBP eCLIP20.27■□□□□ 0.84
SF3A2-202ENST00000586396 STARD3NLO95772 234 aa20.26■□□□□ 0.83
SF3A2-202ENST00000586396 MTHFSDQ2M296 383 aaKnown RBP20.26■□□□□ 0.83
SF3A2-202ENST00000586396 ZNF219Q9P2Y4 722 aaPredicted RBP20.26■□□□□ 0.83
SF3A2-202ENST00000586396 A0A087WZG4 1122 aa20.25■□□□□ 0.83
SF3A2-202ENST00000586396 PDE6BP35913 854 aa20.25■□□□□ 0.83
SF3A2-202ENST00000586396 ERFEQ4G0M1 354 aa20.25■□□□□ 0.83
SF3A2-202ENST00000586396 ZNF330Q9Y3S2 320 aaPredicted RBP20.25■□□□□ 0.83
SF3A2-202ENST00000586396 POTECB2RU33 542 aa20.24■□□□□ 0.83
SF3A2-202ENST00000586396 C21orf2O43822 256 aa20.24■□□□□ 0.83
SF3A2-202ENST00000586396 EIF5P55010 431 aaKnown RBP20.24■□□□□ 0.83
SF3A2-202ENST00000586396 TBC1D9BQ66K14 1250 aa20.24■□□□□ 0.83
SF3A2-202ENST00000586396 PDZRN3Q9UPQ7 1066 aa20.24■□□□□ 0.83
SF3A2-202ENST00000586396 SLX4Q8IY92 1834 aa20.23■□□□□ 0.83
SF3A2-202ENST00000586396 BRIP1Q9BX63 1249 aa20.23■□□□□ 0.83
SF3A2-202ENST00000586396 NPHP1O15259 732 aa20.22■□□□□ 0.83
SF3A2-202ENST00000586396 PRR5LQ6MZQ0 368 aa20.22■□□□□ 0.83
SF3A2-202ENST00000586396 TAOK3Q9H2K8 898 aa20.22■□□□□ 0.83
SF3A2-202ENST00000586396 HEG1Q9ULI3 1381 aa20.21■□□□□ 0.83
SF3A2-202ENST00000586396 CCDC24Q8N4L8 307 aa20.21■□□□□ 0.83
SF3A2-202ENST00000586396 CREBZFQ9NS37 354 aa20.21■□□□□ 0.83
SF3A2-202ENST00000586396 LTBP3Q9NS15 1303 aa20.21■□□□□ 0.83
SF3A2-202ENST00000586396 SCN4AP35499 1836 aa20.2■□□□□ 0.82
SF3A2-202ENST00000586396 DIAPH1O60610 1272 aaKnown RBP20.2■□□□□ 0.82
SF3A2-202ENST00000586396 TEFQ10587 303 aa20.2■□□□□ 0.82
SF3A2-202ENST00000586396 CHADLQ6NUI6 762 aa20.2■□□□□ 0.82
SF3A2-202ENST00000586396 CNBD1Q8NA66 436 aa20.2■□□□□ 0.82
SF3A2-202ENST00000586396 ZNF496Q96IT1 587 aaPredicted RBP20.2■□□□□ 0.82
SF3A2-202ENST00000586396 NPM2Q86SE8 214 aaKnown RBP20.19■□□□□ 0.82
SF3A2-202ENST00000586396 MKRN1Q9UHC7 482 aaKnown RBP20.19■□□□□ 0.82
SF3A2-202ENST00000586396 TBC1D2BQ9UPU7 963 aa20.19■□□□□ 0.82
SF3A2-202ENST00000586396 ST5P78524 1137 aa20.18■□□□□ 0.82
SF3A2-202ENST00000586396 ZNF790Q6PG37 636 aa20.18■□□□□ 0.82
SF3A2-202ENST00000586396 TEX13AQ9BXU3 409 aaPredicted RBP20.18■□□□□ 0.82
SF3A2-202ENST00000586396 POTEIP0CG38 1075 aa20.17■□□□□ 0.82
SF3A2-202ENST00000586396 POTEJP0CG39 1038 aa20.17■□□□□ 0.82
SF3A2-202ENST00000586396 IL6STP40189 918 aaPredicted RBP20.17■□□□□ 0.82
SF3A2-202ENST00000586396 PRPF40BQ6NWY9 871 aaKnown RBP20.17■□□□□ 0.82
SF3A2-202ENST00000586396 CNKSR1Q969H4 720 aa20.17■□□□□ 0.82
SF3A2-202ENST00000586396 SETDB2Q96T68 719 aa20.17■□□□□ 0.82
SF3A2-202ENST00000586396 DDNO94850 711 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 404.5 ms